XLOC_037316 (mRNA) -

Overview
NameXLOC_037316
Unique NameXLOC_037316
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000030_pilon:951785..955563-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037316 ID=XLOC_037316|Name=XLOC_037316|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3779bp|location=Sequence derived from alignment at sc0000030_pilon:951785..955563- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTGTATTCATTGCAAAAGAAAATATTCCAAATCAGTATTTTACCGATC
TCACAATAATCGGAAATGTCAAACAAAGAAGATGGTTTTGGATCCTCCAA
ATATTCTCATAGAAGATGGGAATAATAATTATGATGATCCCAATGATGCA
GAAGAGAATGAGTATAATCATGATGACAATGTCTCAGGTATACGAAAGCA
ATTCAGTAGGGTGTTTGAAAGACAATATTTTTAGTCAAGCTGTATTCGTT
TGTTTAATATTTACATTATGGGAATATATAATCTTGACATTAAGGGATCA
GATAGTTTTTTTATATTCGACCTAAAGATGTCTCCGATGATGGTCCTGAG
AAAAACCTTCAAATTTTTTGACCCAATTATTTTTCAAAGCTAAGATATTT
GATTTTATAATGTGTAAAATTTAGTCTTCACACGCCTTACGATAAATTTA
CAATTTTCAACGTTATTTAACGTTCACAACGTTTACGATTAATATTTATA
TTGTTTTCAAGCAAAAATATCAATTTTTGAAGGTCTTTCTCAGAGCTATG
GGAGATATTTGTCAGTGAAATATAAAAAACTATCTGATTATCTCCCTTTA
ACTATCGCATCTAGAAAATTTAATCAAATCAACACTGTATTTCAACAATT
TTCATTTGTTAAAGATAATGAACAAGATGCACCAGAAGACAGTGGAAATG
ATCAAAACTCTGACGAAAATGATGTGGAAGACGATTTTCCTCAAGATCAA
CCTGAAGATGTAAACTGTCTTTTATAACTTTTTGAACACAGCCTTGCTTG
CTTTTTAGGTTTTGAAAACTTTCTAATTCAAATTCAATAACAATATTTGG
AATAGCAATTTCTGAATACTAAGGCAAACAACCAATTGTGTCATTTGCCA
AGACATATCTTTGTTAAACAATCTGGACATTATGCTCATTCGCCTGTTGT
ATTTTTTTTCTGAACTTGTTTATTACCAAACAATTGAAATTTACTTTAAT
TTTTAAGGTTATAACGGAGGTGTGGGACGAAGAAGAAATTCCTGATTTTT
TTGAGGAGGAAATAGAAGAAGAATACAGTGAAAGCTACCGAAAAGTATCA
AGTGCACTTAAAGAATTACTGAAATGGCAATTGAAGTATTCTGTTTCTGA
TGGATGCCTTAATGCCCTCTTAAAGGTGATAAAAGTTTTCTTGGCAGCAC
TCAACGTAGTTATCAACTCTAACTTCCTTACCGAAGTATTGGAGCTTTTA
CCAGAGACTCTTCACAGCCTTAGAAAAGTTACTGGAATCAACAGGGATGA
TTTTGACCAATATATTGTTTGCCCTGAATGCAACTCACTTTATAAGAAGG
AAGATGTACTTGTTATTGGTTCAGGTAAGCACTCTTTTTTGTTATCATAT
AACACCCATGTTTCTTGACCCGATGGAAAACTTTAATCAAATGGATTAAC
ATAAAGGAACTAAATGCTTTCAATTTACAACAAGATGAAATTTTTTGGAT
AGGGACTTAAGCTGAATGTTACCAATATTCTTTTCTCAATTGGAGTTAGA
TTTTACTGCAGTTCTCCAATGAGGATCAAGTTTCAGGGTATTTTTATCAC
CTTGACAATCTTTTGGCCTTTTATCTAAGGGATAATAAAGGGTCATATCG
GATCCACCAGGTCTGTAACACAAGCCTGCAATACTTAAAAAGAAATCCAG
GACTAAGTCTAAGATTTATGAATGCTTTCACCTTTTAGCTCTTTTTCGAA
AATGGGATTAAAACAATTCGCTTCATAACATAAGGATGAATCACTCTATA
ATCGATCAAATCTACTTGTTTTTTTTTCTACAGATGGCAAACCAAAAGCA
AAGAGATGTTCGTACGTACCGTTCAAACACCACCCTCAAAAAAGATTCCG
CACCCCATGTAACGCAGAGTTGCTGAAGAAAATATCAAATGCTAGTGGAA
GTAAAGAAAATTTTTATCCAAAGAAAGTTTATTGTTATCGTGGCATTAAA
AGATCGTTCCAGGAAAAGCTATTGAGGAAAGGATTTTTGGAAAATTTGCT
CTCTGCACCACAACGTTCATCGAAATATTCTGATATTTACGATGGAAAAT
ATTATTCTGAGTTCAAAGATGCTGATGATTTACCATTCTTCAACGAGAAA
AGAAACATTGGGCTTCTTGTGAACTTCGACTTTTTTAATCCGTTTAAAAA
ATCCAAGTATTCACTTGGAGTTGTGTATGCTGTAATTGTTAACCTACCAC
GTAAAGTCAGATTTTTGTGGGAAAATGTTTTGGTATTGGGGATCATACCG
GGACCAAGAGAACCAAAATTACATATCAATACATATTTACGTCCATTTGT
CGATGAACTTCTTATAGCCTGGTCTCCTGGTATCAAACTGGTGGAGCCAG
ATGGTTTAAGTGCACAATACCAGTTTGGCCTTTTCTCTTTGTCGTGTGAC
TTACCAGCACTTCGTAAAATTGGAGGATTCTTATCTCATAATGCAAAACA
AGGTAAATCACAAACGTTACACCAATTTGTTGCGATTTCTTTTCAGCGTT
AACTTCTTTTGTTTCTAGCTTGTTTTGGCATTAATTGTAGATATACTTTC
AGGTTCAACTCAACAATAGGTAATTTAAACATTCAAATGTGTGTTTGTTC
TTGTAAAATGATATCGTCATCTGGTACTTCAGCCACGAAAGAATTCGATT
CGATTCATTCTTTTTTAAAATGCTTATTTTTTTAGGATGCAGTAAATGTA
CTACTAACTTTACAATCGATACAAAGTCGGAAAATGTACGCGACATTGGT
GGTTTCGATCAGACAAAATGGACAGCAAGAAATGGTGAAGATCATAAGTC
AGCTGGATTTGCTTTGTTACAACACAACACGCTAGAGAAAGTCAAAACAG
AAGAAAGAAGGACTGGAGTTCGATTTAGTGAACTTTTCCGCCTCACTTAT
CATGATCCTATTCGCGGCCACGTCATTGATCCAATGCATAACTTGTTTTT
GGGTAAGAAATAAAAAATTTTCAAACATTCCTTTGTTCAGTTATTATTCA
TTCTATATTGTTTGATTTAGCCAGTATTTCTCCATCAATTCGTCAAAACT
GCCGACGACTTTTAACTACCTAACTCTAAGTGATTTGCAATGAACAATTA
TAAATTATACGGCTCAAGTAAACTGATCACGAAAATTTGAAATAGGTTAA
TAGAAAAGTGAATTTCTATGGCAAGGGAAGCATAGTTTTGTATTGCCCTA
CTGACTGACAATTTTACAATATGGGACATTCATTGAGACAGAGATGTAAG
TAACTTTAATTTTCAATCTATTTTTAGGAGTAGCGAAACATGTGTTTAAT
GTATGGGTGGAGACCGAAACTTTGAACAAAACAAACTTCGACACCGTTAC
TGCGAGGCAAGAAAAGTTACGGATTCCCTCTGATGTTGGGCGTATCGCTA
AGTCTGTCAGTGAAAACTACAAGACTCTAAAAGCTGACGAATGGAAACAC
TGGACGATGGTTTATTCCATCTATTGTCTAAAGGACCTGATTCCAAGACG
TGATTTGGTTATTTGGAGTTACTTTGTTCGAGGTTGTTTTCTGATTTGCA
GACCGGTCATTACGGAGAAAGACATCAAAGATGCCCATGATCTTTTTGAA
AGGTTTTGTACAGATTTCGAAAAAAGATACGGTTCGATCTATCTTGTTCC
TAACTTGCATATGTCATTGCACATCAAGGAATGCCTTAAAGACTTTGGTC
CTGTGTATGCATTTTGGTGCTTCGGTTTC

Coding sequence (CDS) from alignment at sc0000030_pilon:951785..955563-

>XLOC_037316 ID=XLOC_037316|Name=XLOC_037316|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4074bp|location=Sequence derived from alignment at sc0000030_pilon:951785..955563- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTGTATTCATTGCAAAAGAAAATATTCCAAATCAGTATTTTACCGATC
TCACAATAATCGGAAATGTCAAACAAAGAAGATGGTTTTGGATCCTCCAA
ATATTCTCATAGAAGATGGGAATAATAATTATGATGATCCCAATGATGCA
GAAGAGAATGAGTATAATCATGATGACAATGTCTCAGTTTTGTATTCATT
GCAAAAGAAAATATTCCAAATCAGTATTTTACCGATCTCACAATAATCGG
AAATGTCAAACAAAGAAGATGGTTTTGGATCCTCCAAATATTCTCATAGA
AGATGGGAATAATAATTATGATGATCCCAATGATGCAGAAGAGAATGAGT
ATAATCATGATGACAATGTCTCAGATAATGAACAAGATGCACCAGAAGAC
AGTGGAAATGATCAAAACTCTGACGAAAATGATGTGGAAGACGATTTTCC
TCAAGATCAACCTGAAGATATAATGAACAAGATGCACCAGAAGACAGTGG
AAATGATCAAAACTCTGACGAAAATGATGTGGAAGACGATTTTCCTCAAG
ATCAACCTGAAGATGTTATAACGGAGGTGTGGGACGAAGAAGAAATTCCT
GATTTTTTTGAGGAGGAAATAGAAGAAGAATACAGTGAAAGCTACCGAAA
AGTATCAAGTGCACTTAAAGAATTACTGAAATGGCAATTGAAGTATTCTG
TTTCTGATGGATGCCTTAATGCCCTCTTAAAGGTGATAAAAGTTTTCTTG
GCAGCACTCAACGTAGTTATCAACTCTAACTTCCTTACCGAAGTATTGGA
GCTTTTACCAGAGACTCTTCACAGCCTTAGAAAAGTTACTGGAATCAACA
GGGATGATTTTGACCAATATATTGTTTGCCCTGAATGCAACTCACTTTAT
AAGAAGGAAGATGTACTTGTTATTGGTTCAGGTTATAACGGAGGTGTGGG
ACGAAGAAGAAATTCCTGATTTTTTTGAGGAGGAAATAGAAGAAGAATAC
AGTGAAAGCTACCGAAAAGTATCAAGTGCACTTAAAGAATTACTGAAATG
GCAATTGAAGTATTCTGTTTCTGATGGATGCCTTAATGCCCTCTTAAAGG
TGATAAAAGTTTTCTTGGCAGCACTCAACGTAGTTATCAACTCTAACTTC
CTTACCGAAGTATTGGAGCTTTTACCAGAGACTCTTCACAGCCTTAGAAA
AGTTACTGGAATCAACAGGGATGATTTTGACCAATATATTGTTTGCCCTG
AATGCAACTCACTTTATAAGAAGGAAGATGTACTTGTTATTGGTTCAGAT
GGCAAACCAAAAGCAAAGAGATGTTCGTACGTACCGTTCAAACACCACCC
TCAAAAAAGATTCCGCACCCCATGTAACGCAGAGTTGCTGAAGAAAATAT
CAAATGCTAGTGGAAGTAAAGAAAATTTTTATCCAAAGAAAGTTTATTGT
TATCGTGGCATTAAAAGATCGTTCCAGGAAAAGCTATTGAGGAAAGGATT
TTTGGAAAATTTGCTCTCTGCACCACAACGTTCATCGAAATATTCTGATA
TTTACGATGGAAAATATTATTCTGAGTTCAAAGATGCTGATGATTTACCA
TTCTTCAACGAGAAAAGAAACATTGGGCTTCTTGTGAACTTCGACTTTTT
TAATCCGTTTAAAAAATCCAAGTATTCACTTGGAGTTGTGTATGCTGTAA
TTGTTAACCTACCACGTAAAGTCAGATTTTTGTGGGAAAATGTTTTGGTA
TTGGGGATCATACCGGGACCAAGAGAACCAAAATTACATATCAATACATA
TTTACGTCCATTTGTCGATGAACTTCTTATAGCCTGGTCTCCTGGTATCA
AACTGGTGGAGCCAGATGGTTTAAGTGCACAATACCAGTTTGGCCTTTTC
TCTTTGTCGTGTGACTTACCAGCACTTCGTAAAATTGGAGGATTCTTATC
TCATAATGCAAAACAAGATGGCAAACCAAAAGCAAAGAGATGTTCGTACG
TACCGTTCAAACACCACCCTCAAAAAAGATTCCGCACCCCATGTAACGCA
GAGTTGCTGAAGAAAATATCAAATGCTAGTGGAAGTAAAGAAAATTTTTA
TCCAAAGAAAGTTTATTGTTATCGTGGCATTAAAAGATCGTTCCAGGAAA
AGCTATTGAGGAAAGGATTTTTGGAAAATTTGCTCTCTGCACCACAACGT
TCATCGAAATATTCTGATATTTACGATGGAAAATATTATTCTGAGTTCAA
AGATGCTGATGATTTACCATTCTTCAACGAGAAAAGAAACATTGGGCTTC
TTGTGAACTTCGACTTTTTTAATCCGTTTAAAAAATCCAAGTATTCACTT
GGAGTTGTGTATGCTGTAATTGTTAACCTACCACGTAAAGTCAGATTTTT
GTGGGAAAATGTTTTGGTATTGGGGATCATACCGGGACCAAGAGAACCAA
AATTACATATCAATACATATTTACGTCCATTTGTCGATGAACTTCTTATA
GCCTGGTCTCCTGGTATCAAACTGGTGGAGCCAGATGGTTTAAGTGCACA
ATACCAGTTTGGCCTTTTCTCTTTGTCGTGTGACTTACCAGCACTTCGTA
AAATTGGAGGATTCTTATCTCATAATGCAAAACAAGGATGCAGTAAATGT
ACTACTAACTTTACAATCGATACAAAGTCGGAAAATGTACGCGACATTGG
TGGTTTCGATCAGACAAAATGGACAGCAAGAAATGGTGAAGATCATAAGT
CAGCTGGATTTGCTTTGTTACAACACAACACGCTAGAGAAAGTCAAAACA
GAAGAAAGAAGGACTGGAGTTCGATTTAGTGAACTTTTCCGCCTCACTTA
TCATGATCCTATTCGCGGCCACGTCATTGATCCAATGCATAACTTGTTTT
TGGGATGCAGTAAATGTACTACTAACTTTACAATCGATACAAAGTCGGAA
AATGTACGCGACATTGGTGGTTTCGATCAGACAAAATGGACAGCAAGAAA
TGGTGAAGATCATAAGTCAGCTGGATTTGCTTTGTTACAACACAACACGC
TAGAGAAAGTCAAAACAGAAGAAAGAAGGACTGGAGTTCGATTTAGTGAA
CTTTTCCGCCTCACTTATCATGATCCTATTCGCGGCCACGTCATTGATCC
AATGCATAACTTGTTTTTGGGAGTAGCGAAACATGTGTTTAATGTATGGG
TGGAGACCGAAACTTTGAACAAAACAAACTTCGACACCGTTACTGCGAGG
CAAGAAAAGTTACGGATTCCCTCTGATGTTGGGCGTATCGCTAAGTCTGT
CAGTGAAAACTACAAGACTCTAAAAGCTGACGAATGGAAACACTGGACGA
TGGTTTATTCCATCTATTGTCTAAAGGACCTGATTCCAAGACGTGATTTG
GTTATTTGGAGTTACTTTGTTCGAGGTTGTTTTCTGATTTGCAGACCGGT
CATTACGGAGAAAGACATCAAAGATGCCCATGATCTTTTTGAAAGGTTTT
GTACAGATTTCGAAAAAAGATACGGTTCGATCTATCTTGTTCCTAACTTG
CATATGTCATTGCACATCAAGGAATGCCTTAAAGACTTTGGTCCTGTGTA
TGCATTTTGGTGCTTCGGTTTCGAGTAGCGAAACATGTGTTTAATGTATG
GGTGGAGACCGAAACTTTGAACAAAACAAACTTCGACACCGTTACTGCGA
GGCAAGAAAAGTTACGGATTCCCTCTGATGTTGGGCGTATCGCTAAGTCT
GTCAGTGAAAACTACAAGACTCTAAAAGCTGACGAATGGAAACACTGGAC
GATGGTTTATTCCATCTATTGTCTAAAGGACCTGATTCCAAGACGTGATT
TGGTTATTTGGAGTTACTTTGTTCGAGGTTGTTTTCTGATTTGCAGACCG
GTCATTACGGAGAAAGACATCAAAGATGCCCATGATCTTTTTGAAAGGTT
TTGTACAGATTTCGAAAAAAGATACGGTTCGATCTATCTTGTTCCTAACT
TGCATATGTCATTGCACATCAAGGAATGCCTTAAAGACTTTGGTCCTGTG
TATGCATTTTGGTGCTTCGGTTTC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_037316XLOC_037316-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000030_pilongenomesc0000030_pilon:951785..955563 -
Properties
Property NameValue
Aaloc1588-2037:451
Aaloc1321-1584:1043
Aaloc652-1317:1945
Aaloc283-648:2773
Aaloc190-282:3114
Aaloc1-186:3780