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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000223_pilon:334739..339072+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037310 ID=XLOC_037310|Name=XLOC_037310|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4334bp|location=Sequence derived from alignment at sc0000223_pilon:334739..339072+ (Clytia hemisphaerica_ch_hm2_pilon)
AACGATTTATATCAGCATTTCCAGAACAACAACATCGAGTCCCACATGTA
TGCTTCACAATGGTTCTTGACCTTATTCACAGCCAAGTTTCCGCTTTCCC
TGGTTTTCAATATCATTGATATCATCTTTTGTGAGGTATGTACGCTTAAA
CCTGTTACAATGCGATTTCCTTTTCATGTTAACCCGGCattgtacagtgg
agtctctttgaTCCGAACCTTTAGATCTCAAGTTTTCTAgtcctttcagt
taacaatgccttataaaccttacttcataactcgaaaatctccttaactc
gaacaaacttGCGTTTTCCGTGCGTGTTAGAGTtttggagactctactgt
agcACCCCTTTAACTTGATATTGATCTAGGTGCAAattatttgaactttt
ttccgtGCAACCTTTTCCCTGGATTGTATTGGATTAGACATTATTCTGAT
TTAAATAATTTCACCGCTTGTTTATTTTCAGGACCTTGATTCAATTTTCC
AAATAGCTGCTGCACTTCTAAAGGTAAATTCAAGTATGCATGTGACGTAT
CTTTCCGCGAAACTCGGTTTAACTTTATCTATTACTTACTGGTAGACAAT
GTTCTAGtcaaaaatgtcgtcaaaaaCCGTCAAAAGTTAGCCACGGCGTT
TTGATTCTTAACCTAGTCTAGCTCACTGGACATATAATTTACTCGTTTTC
CGCTATTTTTCTTGGTTACAATCTTCTATCTTTCTAATTTTCAGACAGCA
CGGAAGGATTTACTACAATTGGATTTCGAAGGGATATTAAAATACTTTCG
TATCAACATGCCAAAATATTACATGTTGGAACCACACAGAAAAGATCTTG
TCAAAACTATCTACGATATTAAGGTATCATTTGTTAGAGCTCTGATAAAA
ATCCTACACGATTCAAGCAAACGTTATGAATCCGGCAAATTATTAAGATT
TGTCGAAGATCACAAGGTTTTCTTACTTTACACTAAGGCTATTATACAGT
GAACTTTCCAATTGGGTCTTAAAGGTATTaaggttgttttttttgaaTCG
GAAAAATGTTATCTCTTGTAGAGCTTCTTGGCTGAAGGTACCATAGATTT
AGTTCGAGCTACAAGAAGGCTTGAAGCagattaaaattagaaaaaatcaa
CTGTGTACCCTGATTTAGGATCACCATATACCCAAACTAATTGTCTGAAa
tgcagacctctatagatatacttcctatacaaaaaactcttttcgctaga
gcATGAGCAGAAGCCTGCCGTGCATGTGACGTTGTTTGGAGGGCGTTGTA
ATCTTTTAGATTACCTTTGCCCATTGTGGATTTTGTTATAAACAACTTGG
TTTCTGTATTCAGCTTACTgaagattaaagaatttttatgctaaaaaagC
ATAAGCAGAAGCCTGCCAAACTAACTTCTAAACAAGTTTCCATTAAtcta
ataaaattcatttcatccatggggacgagatggagtttttacaagctctt
atttgatttggttggtcgttaaccagtaataaaacaataaagAAGGCGTC
ATTTTTGTCCATCCATATCCATCCATCATGATTTCTCCCTCATTCATTAG
ATTTCCAAGAAGAAGGTGACCAAGTACAAACAAGAATACGTTCAAATGAA
GGAAGAACAAGAACTAAAAGAAGACCCTGTGGAAAGATTAAAGGTTAGAT
TTGATATTGCTGCTTTCACTCTGGGATAAAGTCTCGTTACTTTGGTATCA
TTATTCCActaaaagattgaaaatgaaagtttttgatcCCGCAACGCCCT
TTCAACGCCCTTTTGAAGGGCAGAACTATGCCTCAAAAAAGTTATCTTTG
CCTTCAATAGTGTAGGGATGCCGGGCTGAGATTTGTATCCTATTCTACTC
CTAATAGAGTCCCGGTACCAGTGTCTCTAATACTATTAACCAGTAATGAT
AATGCCAGATAACGTCGAGTTGATTATTGTGAGGCATTATTAAAAACCTT
AGTTCTAtccattttaatatttttcattcttcCTATCTGTTTTAGAGAGA
AAATGGTGAACTTCAAATGGAGAAATTACGCTTAGAACGTGAGAATGACA
GTTTAGCATACGAAGTTGTCACAACTCAAGTCTCAATGCAAGAAATCATC
ACTGATGTAtactttttgttcatttttggtccttttgcgtctttcctatt
acattttttctaaattcttttttcttggCATTACTCGTTAAAGTCGCCAC
ATTTAgccttttttcaaaaggaaaccgcCCTGGAATTTGGGTTCACTTAA
GGTGTTTTAGATTGGCTTTTTATCTTTGGACTTGAAATCTGTATATAGCT
CCCTACAGTTGACTTTCTCTCCCTCTCTGATCTCTATcatccgaatcttt
ctgtaatccAAGCTAGTACATTGGTCACCTGACCTGGAAATTCGTATAAA
TTACTCTCCGTAATGATAATCTTTCCCTAATTCGAACAAGAAAGTTTGGC
CCCTTGAAGCCTTTTGGATTTCTGACCtcgattttgttttcattttccgC
AGAGAGAAGAGAAATTGAACGAGATGATTAAAGAAACGGAACAATTACGT
AATCATTTAACTGACGCCGAAGAAGAAGCGGAAAGACTGAAAGTTGAAGA
AGCAAGGGTATAAAagttgttttgtgttttgtttgttatctttttcagat
attttcGCTGTTCCTATTACCAAGAATGGTCTTAAGTGTTGGACCGGCAt
gattttgaaacaatttacaCTTGATCTTTATCAGTTTGATGTTGTTTCAA
GGATTTTGTTGCCTAGGTTATATAACCTAGTTATCCACGAGCTGATATTT
TTGGTGCTTACAATTTGACTTATAGAGACATTTTCTTGACCATAATTTAC
ATAATAAACTtgtttcattcattcattcaatcattcgttcattcattcaa
tcattcattcattcattcattcattcattcattcattcattcattcattc
gagCGGTAACAATAAtggtttattatttttctttcatattcagGTCAAAG
ACATGTGGCGTGATAGCATGAGACAGGCTGATGAAAATAAAGCAAAACTA
AATCGAATCATTGATGATTATAAACAGGTACTATTATAGCCTGTCTACGT
TTATTCTTACtcattcttcttttgttttaatccCTCACCCCTACCAGTCG
ACAAAACTATGTGATATCGAAATACTAAAATTGGTTGGCAGTGTTGCCCA
AAATATTCCGAACTGATTCGAAAACAACTATAACACTGAAAAAATGGTTC
ACCAAAAGCTCCTGCATGTTGTGATGGTAAATGTTTGcatatttttacat
aatttcagACTCCCTCAATCCCCGAGTTTTCCAGGGTTTTCAGGTACACC
TTTACAGATATATGACCTTCCCAATATGAGGGGTTTTACTTGAGCCCAGT
CGTAGGGATGCTTGAGAATGGCTTCTGTTTCCATTGCTAAGTCTCACGTT
TTACGTATACTTCATTTCCCTACTTTAGATTTTGGCTCGACTAGAAGAAC
GCAACGAAAAATTAAAACGAGATTTCACTGCTGAAACAGAACTGCTGAAG
GTAAGGACAAATGAAATAGGTCCATAGTTTATCCTATATTTCGATCTCAA
CAAAGCCTTCTTCTATCAAAATctatcattttcatttgaaaaaaaaattg
atttgaacCGAGATTATGAGACGTAGGTCCAGCAGCGTTTTGCTTACTTT
TGTTTGAGACTGTTTTCTGGCTTCATTTctcattttggaaaaatatgatt
AGACATTTTATTCTCAGTGTaaagagatttttcaagttGGCTAAACATAC
AAAATTATCAGTATCAATCTTCATAAGGAATCGTTTCTtcaaaatcgaat
gttttcatCAATAATGACGGGTTTTCCTGTATGTAACACAACCTTGCTCT
ATTATAGACCTCTATTATAGAATCAGGTCAAATTTGGGAAATTCTTAACT
TTCACCATTGTTCATGGCACTTTTTCAATGATTCTTCCAATCTTCTTTAT
AGAAACAGTTATCAACGTGCGAGAACTGTACGAACGCTTTGATGAAAAAC
ATTTATCCAGACGAGGATGACGAGGGCGGACCGAGAGAACCAACCATCAC
TAAATTACTCTCCAAAGAGGATCACGAAGAACAGATGCGTAGCTTAGAAG
AAGAGCTCATTAAAACAAAAGTCGCACTGGCGGAAGaaaaaaaTCGCGCG
GACGAAATCGAAATGAAATTACACAATTTGATGAGTGCGAACGAGAAGCC
GTGGTATAAGAAGGTAACTGTGATTAAAAAATAG Coding sequence (CDS) from alignment at sc0000223_pilon:334739..339072+ >XLOC_037310 ID=XLOC_037310|Name=XLOC_037310|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2106bp|location=Sequence derived from alignment at sc0000223_pilon:334739..339072+ (Clytia hemisphaerica_ch_hm2_pilon)
AACGATTTATATCAGCATTTCCAGAACAACAACATCGAGTCCCACATGTA
TGCTTCACAATGGTTCTTGACCTTATTCACAGCCAAGTTTCCGCTTTCCC
TGGTTTTCAATATCATTGATATCATCTTTTGTGAGAACGATTTATATCAG
CATTTCCAGAACAACAACATCGAGTCCCACATGTATGCTTCACAATGGTT
CTTGACCTTATTCACAGCCAAGTTTCCGCTTTCCCTGGTTTTCAATATCA
TTGATATCATCTTTTGTGAGGACCTTGATTCAATTTTCCAAATAGCTGCT
GCACTTCTAAAGGACCTTGATTCAATTTTCCAAATAGCTGCTGCACTTCT
AAAGACAGCACGGAAGGATTTACTACAATTGGATTTCGAAGGGATATTAA
AATACTTTCGTATCAACATGCCAAAATATTACATGTTGGAACCACACAGA
AAAGATCTTGTCAAAACTATCTACGATATTAAGACAGCACGGAAGGATTT
ACTACAATTGGATTTCGAAGGGATATTAAAATACTTTCGTATCAACATGC
CAAAATATTACATGTTGGAACCACACAGAAAAGATCTTGTCAAAACTATC
TACGATATTAAGATTTCCAAGAAGAAGGTGACCAAGTACAAACAAGAATA
CGTTCAAATGAAGGAAGAACAAGAACTAAAAGAAGACCCTGTGGAAAGAT
TAAAGATTTCCAAGAAGAAGGTGACCAAGTACAAACAAGAATACGTTCAA
ATGAAGGAAGAACAAGAACTAAAAGAAGACCCTGTGGAAAGATTAAAGAG
AGAAAATGGTGAACTTCAAATGGAGAAATTACGCTTAGAACGTGAGAATG
ACAGTTTAGCATACGAAGTTGTCACAACTCAAGTCTCAATGCAAGAAATC
ATCACTGATAGAGAAAATGGTGAACTTCAAATGGAGAAATTACGCTTAGA
ACGTGAGAATGACAGTTTAGCATACGAAGTTGTCACAACTCAAGTCTCAA
TGCAAGAAATCATCACTGATAGAGAAGAGAAATTGAACGAGATGATTAAA
GAAACGGAACAATTACGTAATCATTTAACTGACGCCGAAGAAGAAGCGGA
AAGACTGAAAGTTGAAGAAGCAAGGAGAGAAGAGAAATTGAACGAGATGA
TTAAAGAAACGGAACAATTACGTAATCATTTAACTGACGCCGAAGAAGAA
GCGGAAAGACTGAAAGTTGAAGAAGCAAGGGTCAAAGACATGTGGCGTGA
TAGCATGAGACAGGCTGATGAAAATAAAGCAAAACTAAATCGAATCATTG
ATGATTATAAACAGGTCAAAGACATGTGGCGTGATAGCATGAGACAGGCT
GATGAAAATAAAGCAAAACTAAATCGAATCATTGATGATTATAAACAGAT
TTTGGCTCGACTAGAAGAACGCAACGAAAAATTAAAACGAGATTTCACTG
CTGAAACAGAACTGCTGAAGATTTTGGCTCGACTAGAAGAACGCAACGAA
AAATTAAAACGAGATTTCACTGCTGAAACAGAACTGCTGAAGAAACAGTT
ATCAACGTGCGAGAACTGTACGAACGCTTTGATGAAAAACATTTATCCAG
ACGAGGATGACGAGGGCGGACCGAGAGAACCAACCATCACTAAATTACTC
TCCAAAGAGGATCACGAAGAACAGATGCGTAGCTTAGAAGAAGAGCTCAT
TAAAACAAAAGTCGCACTGGCGGAAGaaaaaaaTCGCGCGGACGAAATCG
AAATGAAATTACACAATTTGATGAGTGCGAACGAGAAGCCGTGGTATAAG
AAGGTAACTGTGATTAAAAAATAGAAACAGTTATCAACGTGCGAGAACTG
TACGAACGCTTTGATGAAAAACATTTATCCAGACGAGGATGACGAGGGCG
GACCGAGAGAACCAACCATCACTAAATTACTCTCCAAAGAGGATCACGAA
GAACAGATGCGTAGCTTAGAAGAAGAGCTCATTAAAACAAAAGTCGCACT
GGCGGAAGaaaaaaaTCGCGCGGACGAAATCGAAATGAAATTACACAATT
TGATGAGTGCGAACGAGAAGCCGTGGTATAAGAAGGTAACTGTGATTAAA
AAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000223_pilon | genome | sc0000223_pilon:334739..339072 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 772-1053:4053 |
| Aaloc | 700-771:3529 |
| Aaloc | 616-699:3044 |
| Aaloc | 511-615:2553 |
| Aaloc | 400-510:2046 |
| Aaloc | 307-399:1601 |
| Aaloc | 178-306:745 |
| Aaloc | 136-177:482 |
| Aaloc | 1-135:1 |
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