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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000285_pilon:392812..395844+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037308 ID=XLOC_037308|Name=XLOC_037308|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3033bp|location=Sequence derived from alignment at sc0000285_pilon:392812..395844+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACTCAACtgctatcaaaacaaaatggaaatTGGTTTAGAATTCGA
TCACCTATCACGTCACTCCTTACCTTATATCGTCAAATTTCATGGTGATA
ATAACTGCCCAACATTAAATGCATCTTCAGCATCTTCAATATACGATGGA
CGTCTATGGATGAATGCAAATTACAGTGAATGTGGTATCAAAGCTTTTGA
GAGCGGAAACAAACTAGTGTTCAAACAAATCGTTGAAGTTGTGTacggaa
aacaaatgaaatctttAGATGTTTATCGACATTTTATTGATACTTATAAC
GCTTCTTGTTCGATTGATAGAAATGTTACACATAAATTAAACATCGATGT
TAAAGAACAGGAGACTCTCGACGATGAAACAGGTAGGCACTTTACCtgta
gcacacaacgttgttttaacgtccatctaatgtttacaacgtccatataa
cgttagatgaatacAACAACGTCGGGCGCCATCCGGGTTTCTATACTTGT
gatgcatatttatttttaatgtatgTTTTTATGAGGCCCTCCAAGCGGTT
TTCTTGATGTCGTACTAGAGACTTTCTTCTGGCGAGGAAACAGGTAGGTA
CTTTAcaggggggtttcatggttgacGGAGGAgtggaatcggcccttttt
cgaacggagtggcggaatttgacgaaaattttgacggaatttcggaaatt
gaATCTGCTGACGGAGatggaaaattagacaattttagtgtggaaaaacg
gaatttagcaaatgtttttgcagtttttcgGAATTATGGCTAAAGATATT
TGAATCACGCAGAATTTTTTACAAAGAAAGCTTGAACTTCAAAGGAATCT
TTGATGGTGgagttcttattttcaccctgaaaattgtaaaaaatcaccaa
aagtCGTCCCTTtccagatacacatcttgaaaattagtaaaatttGGGAC
CCTaccagatatcttcagagcctaaaaaagggatcCTGACTAGCAACATA
TCCCCCCGTACCCAATTATGCTTACCTTTTCTGAAGGTGAATGGTAAAAT
ACGATGGCTTTTTTACGGAAAAACTTAATGAAGAACTAACTCGGCAAAAA
GTACTCTAGGGGTTCACGACTTGGCGAAAATAAAGTTGATTCAATAATAC
AGTGGGACTTCCAATTTGCGGACACCACGGGGAAAAGGGTGGTTAGTGTC
TGCTATAGTGTCCACTAATAAGTacatatttcaaactttttttttattca
acagAGGAGAACGccgatttcaaattcaaatttagtGCTTTCAAAGACGA
TAAAACAGCGATCAGTGGTTTGGTCTTTCTTGGAGATTTAATCCATTTCG
AATTGGAGTTACTTTCCAACTCTAAAGTTGTGAAAACGTCTCCTCAAGAT
TGTTTTGCTACGCGTTTGGATGGAACAGGACGCTACGATCTTATTAAAGA
TAGGTAAACATATATTTATTGTATAGTCAAAAACGTCgcaaaaacctttc
ttttgGGATGAGATTTAagtaataaaatttcaaattaatttctcaaaaaa
ttgtgtgaagaaaatctccatgaagaaaaacaacaacaataggTAGAAAA
GGTAGCTAAGAAATGCTATGTTCAGTTTCAAAACCTTCGCGAGTGTTTTg
ccttaatttcttttttagcGGAAACCTTTACCAACTTTAATAACCTTAAA
ATCATTTAGACGATGCTATAGTCTGTTAAAGGGATAGTTTATCGGCGGTA
AAATGTATATGTGTGGAGTTTTCAACCGTAATGTCAGTATACGGAAAAAT
TGGCGatagagttttgaaaaaatgtcaagctctaccggctgtaaactatt
ttcgCCGCaaaaaaaTATCTGTTTGCTTTGGCTTTGGTTTTATTTCTTAG
TTAGTGATTTGAAATcattcaatacaccttttctaacgtagccgccaatt
gccacgtGAGCATtgttttgtccgttttaccaccctaaaaccgttccagt
ctttttttcgcacctataagacaatagaaaaaaaccagctggcacacaac
gttgtttaaacgttaatctaacgttcacaacgtccatttaacgttagatt
aacgttaaaacaacgttgtatgccagctgggaagtgtaaaaaaaaggatt
agatcgagtttagggtcgtaaatcaaataataaagtggcaagtgtctgac
cgcgcgactacggtcgaagaGGTGTATTGGCCAAATattcttatcatttt
tttagATGTGTAGGTGATGATGAAACACTCGCGATCACATCGTCCAATCA
ACAAACACACATGTTCTCGTGGGAAATGGAAGCTTTCAGATATTTTGGAA
ATTCTGACGGTATTGTAATCACCTGTCGAGTTTTGGTTTGTCGAAATAAT
CCTTTTGATCAACTGACAGATGAATGTAAGAGATGTGGACAAACTACCGT
CAGACGAAAACGAAGaaatgatgaagatgaagaggaGAAAGATGTTTTGA
GCGAAACTTCGCTGAAGAGTGATCCCATTTTCCTTGTTGAAAGACCAGGT
ATAGGTATGTCGCTCTCTCTCTCATTATTTCTCTTCTTACATGTTGTAAA
TTGTCGATTTGAGTGATACTTCATTTCCTGTATTAAGTTTCCACTGACTT
TTCTGAGATTTTTCCGCTAAATAATGTTTTCAAGGCAGTTGTTGCACTCA
TaatgatttatgaaaaggcccaATGTCATTATTAAATCTGTCATAATTTA
AATACGTACTATGTACTTATCGTGCCTTTTACTGATGCATATTTCGTGAC
TGTTCCCCAGCTCCCGGACTATAACTTTAGTCAACTCTGatgttattgtt
ttatttattcTACACAAAGGCCTTGCCAAAGTATCTGGCGATGAAGCAGG
TCTCGATCACACTGAAAAGATGGCAATCATTGTCGTTTGTGGTGTTGTTG
CTTTGGTTCTTTGTGTTGCcatcgtcaaaaagtttttcttcaaACCTCAA
AGTGGAATGCCAGAAAAACCTGTTGTTGGATAA Coding sequence (CDS) from alignment at sc0000285_pilon:392812..395844+ >XLOC_037308 ID=XLOC_037308|Name=XLOC_037308|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2088bp|location=Sequence derived from alignment at sc0000285_pilon:392812..395844+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAACTCAACtgctatcaaaacaaaatggaaatTGGTTTAGAATTCGA
TCACCTATCACGTCACTCCTTACCTTATATCGTCAAATTTCATGGTGATA
ATAACTGCCCAACATTAAATGCATCTTCAGCATCTTCAATATACGATGGA
CGTCTATGGATGAATGCAAATTACAGTGAATGTGGTATCAAAGCTTTTGA
GAGCGGAAACAAACTAGTGTTCAAACAAATCGTTGAAGTTGTGTacggaa
aacaaatgaaatctttAGATGTTTATCGACATTTTATTGATACTTATAAC
GCTTCTTGTTCGATTGATAGAAATGTTACACATAAATTAAACATCGATGT
TAAAGAACAGGAGACTCTCGACGATGAAACAGATGAAACTCAACtgctat
caaaacaaaatggaaatTGGTTTAGAATTCGATCACCTATCACGTCACTC
CTTACCTTATATCGTCAAATTTCATGGTGATAATAACTGCCCAACATTAA
ATGCATCTTCAGCATCTTCAATATACGATGGACGTCTATGGATGAATGCA
AATTACAGTGAATGTGGTATCAAAGCTTTTGAGAGCGGAAACAAACTAGT
GTTCAAACAAATCGTTGAAGTTGTGTacggaaaacaaatgaaatctttAG
ATGTTTATCGACATTTTATTGATACTTATAACGCTTCTTGTTCGATTGAT
AGAAATGTTACACATAAATTAAACATCGATGTTAAAGAACAGGAGACTCT
CGACGATGAAACAGAGGAGAACGccgatttcaaattcaaatttagtGCTT
TCAAAGACGATAAAACAGCGATCAGTGGTTTGGTCTTTCTTGGAGATTTA
ATCCATTTCGAATTGGAGTTACTTTCCAACTCTAAAGTTGTGAAAACGTC
TCCTCAAGATTGTTTTGCTACGCGTTTGGATGGAACAGGACGCTACGATC
TTATTAAAGATAGAGGAGAACGccgatttcaaattcaaatttagtGCTTT
CAAAGACGATAAAACAGCGATCAGTGGTTTGGTCTTTCTTGGAGATTTAA
TCCATTTCGAATTGGAGTTACTTTCCAACTCTAAAGTTGTGAAAACGTCT
CCTCAAGATTGTTTTGCTACGCGTTTGGATGGAACAGGACGCTACGATCT
TATTAAAGATAGATGTGTAGGTGATGATGAAACACTCGCGATCACATCGT
CCAATCAACAAACACACATGTTCTCGTGGGAAATGGAAGCTTTCAGATAT
TTTGGAAATTCTGACGGTATTGTAATCACCTGTCGAGTTTTGGTTTGTCG
AAATAATCCTTTTGATCAACTGACAGATGAATGTAAGAGATGTGGACAAA
CTACCGTCAGACGAAAACGAAGaaatgatgaagatgaagaggaGAAAGAT
GTTTTGAGCGAAACTTCGCTGAAGAGTGATCCCATTTTCCTTGTTGAAAG
ACCAGGTATAGATGTGTAGGTGATGATGAAACACTCGCGATCACATCGTC
CAATCAACAAACACACATGTTCTCGTGGGAAATGGAAGCTTTCAGATATT
TTGGAAATTCTGACGGTATTGTAATCACCTGTCGAGTTTTGGTTTGTCGA
AATAATCCTTTTGATCAACTGACAGATGAATGTAAGAGATGTGGACAAAC
TACCGTCAGACGAAAACGAAGaaatgatgaagatgaagaggaGAAAGATG
TTTTGAGCGAAACTTCGCTGAAGAGTGATCCCATTTTCCTTGTTGAAAGA
CCAGGTATAGGCCTTGCCAAAGTATCTGGCGATGAAGCAGGTCTCGATCA
CACTGAAAAGATGGCAATCATTGTCGTTTGTGGTGTTGTTGCTTTGGTTC
TTTGTGTTGCcatcgtcaaaaagtttttcttcaaACCTCAAAGTGGAATG
CCAGAAAAACCTGTTGTTGGATAAGCCTTGCCAAAGTATCTGGCGATGAA
GCAGGTCTCGATCACACTGAAAAGATGGCAATCATTGTCGTTTGTGGTGT
TGTTGCTTTGGTTCTTTGTGTTGCcatcgtcaaaaagtttttcttcaaAC
CTCAAAGTGGAATGCCAGAAAAACCTGTTGTTGGATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000285_pilon | genome | sc0000285_pilon:392812..395844 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1006-1038:3001 |
| Aaloc | 883-1005:2872 |
| Aaloc | 583-879:2257 |
| Aaloc | 385-579:1257 |
| Aaloc | 1-381:1 |
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