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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:751215..755983+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037267 ID=XLOC_037267|Name=XLOC_037267|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4769bp|location=Sequence derived from alignment at sc0000120_pilon:751215..755983+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGCCATCTCCAAGAAAGAAGAAGCTAACTGTTAAAGTTGCTTTAACTCC
AAGTCGAAGCAGAAGTGCTAGAATTAAGGCCAATGAAGTTAAGAAGGAGG
AAGTGGATGATGAGAAGCCTACAACATCTAGAAGAAATTTGCAGAAAAAG
ACAAACTCACCTAGAGGTTTGTACAAGGTTTCCATTTGTCACAACGCGTA
CATGAAactaagaaaaaataaacattttcattCATACATCATAATTTTTA
TTCTAGACGTCTTGTGAAATTGATGCACAGATTTCACTTTTTAcagttct
tctttttttggtAACTAATTTATGCAGAACTGGTTTTCACAGTTTTAGGT
CTCTACTGATAGAAAATACAGTTTTCACTGAATGGaatggaaaatgaaga
aatatcTCATAACATATTACCACATACCTTTAAATCCACTGAGGAGATTT
TAACTTTTCAGTATTTGCTGTTTATCTAGTTTCTCTTCTTCAATTTACCT
AGTCAGGAATAATTTCATATGataaaacttttcatttatttcaggAAAGG
GTGGTCTTTCCACTCGGGACAAATCAAAGAAATCGGCTAAAGGAAAAGGT
TCAAATCAATCTTCTAAAATGACAGTTTTGGCGTTAGCTGCAGCACGAAA
AAGAAAGTTAAACGGTGAAGACGATGACGAAGATGAAGATGAGaaaccta
aaagagctaaaagaaaaaaggttgttaaaaaggtaaaaCTTCTATCACTC
AAATAcaaaactcaatttgaattaGAAATTAAAATGTTTGTTCCTGTTAC
GACCTTGCCTTAAGCCAAGAAGACAGATCATGATTAATCATGGgggtttg
taataaaaaatatcaGACATCACAAGCTTTAGTGGTGATTTGGACTGTCa
aaaaaaaaCTcgagaaataattttgataagtATCAAGAATTATATACAGa
aaaaaacttaagattttttgcatttgttactaaaattaaagattttaatt
tttagaatatttttcagaccttttagttttctaattttttctacacttgt
ccaaatttttgaaatcttaacACAACCTTagcaccatgaaactctgagtt
tgtaATCAGAACTTACTCACTCTAAATATGTAGTAAAAATCAGCATTATT
TGAAAAATGGTCCCTAGAAAACCAAAAAGGGTGGTCTTTCTGTACATGTC
ATCACTAAAGTAAATTTACAATTACACCCATTTTGGTGATGGTCTGCaaa
aaaaaTCCCACAATCCTTAAAGtcatgtctgagattttagtataGACCCC
TGTTTCAATTCTTAATTTATAAGGtcgttttttttggaaatacatTCAAT
TTTATCCATTTCAAAGTGCCTGGTTTGGCAAAAATCTGCCTGGCTTTCAG
AGGTTTTATTACTCCCTATGGGGATATGAGGCCCCAGACCCTAACCCTTG
TTTTGGCCTGCATTTAGCATTTTCAGCAACTAATCATTAGCTGAATATTC
AATTACATTGCAAAGTAGAAAAGTGTGAGATTGCTTCTTCGGATCTGGAA
AACCTTGGAcaagaattttttgcaaaaattatttattgtatATCTTATTT
CCTTTAGACTGGTCGTAAAAAAGCTGTTCaaaaaaaGACCACTTCCAATT
ATCTGGATCCTATTGATGAAAACAACGAAGAGGTACTGTATGCTTCTATA
AATTGTTTATATAATTGTGTACatcatttttggtaaaatttatcTAACCA
AAACTGAAACTGTTTTCCAGAAAACTCTTTTGccgtaaaaatcagatttt
tgtatTTGGGGAAACTTCCTTCTGTCATTTTCTGTTCTCgcgattggctt
ggtattttttctgattttttagtttgcattctcttactattgttgccctt
tttttctgttttcttataACATTagccttcaggtaggtccaatctgcaaa
aaatttgttgatataaaattattgaaatcaCCGTTTCCTTAAAGACAAAA
GGTTCATCCTAGCCCCTTCTGACTTGAAATTCAACAGTTTATGGACATGC
TATTATCGTCTGCTGATTGAAAATTTAAGTTAAGTTGATTAATTGCTTCA
CATGGTGACAATTTATATATTTTGCTGAATAGGGTTTGGAAGAGGACGCA
TTAGAAGAGCAACAAATGTTAGCAGCAGTGAAAGAAGAGAACGAGTTGAG
TGCATTGGGAAGCAGTGGTGTTGGTGATgaggaagatgaagaagatgatg
atCTAGATGAAGGTGACCAAGATGTAGAAGACGGAGAAgacgaggctgaa
actttggctgaggatgatgacgaggacgatgatgatgatgacgatgaagT
GGCTGAAGATGAACAGAACCAAGGAATCTTCATCAGTGATGAGCATCAAT
ACATTGAAACTATGAATCATGAGCATACTGAAGCGTCACACCATGAGGTG
ATTGAAGAATCTGAAATTGAGGTGATTTTTCATCCTATTgcttattttct
gtttttggacctaccttaaggggggtcctataaattaacctgtgtatGTC
CGtgtgtccgtccgtctgttattaggttttctcaggattggctcattcgA
TTTTTCGCTCAATGATGTAAAGTGGTAATTCCCAAAATGTGATTATTGCT
ATCttgaaaaaacaaaggaactgtCTTAATAAATCAAAACAGAACCTATC
GCCTCCTTACGTTGAAAATTTCAGGCATGCGATgacaaaataacattttt
gtaAGACCAGCCTCATattattgcatttttttctttatcccAGGTACCAC
AAGAGCAGGTGCAAGCTGAACTACAAGAACAACAGGAGCaagaagatgat
gaagatgaaaatgatgacgatgaagacattgatgaaaaCCTCTTCTTTGG
AATCCCTGAACAACGCTCACCTGAGCTTGCAACATGCACACATTGCAAAG
GTATTAAACAAAAAGTTCAGCTGACTACACCAGTTTTACGTTTGACCAAT
TGCACCTAAAATTATTTGAGTATCAAGCTTTTTCAAACGTTTACCTATAG
TTCGATGGTAAAAGTTGACAAAGCTCAAAGCTGATTTGATTGATGTGGTG
TGGATTGCTGTGTTTCCATGCATATAATATCTTCTGAGCGTTATCTTTCA
AGTGATTGGATTTTACTTCATTTCAGGTAAATTCCGTAAAGAAGATGTCC
ACGAGCACATGTTAACTTGTCCAGAACGATATGTACAATGTCGAGAGTGC
GGAAAGATTTTATCCAATCTTCAAACACTAGAGCGTCACCATAAAAGGTT
TCATCTCAAGATCCGAGAAGTTCCGTGCACTTTATGCGATAAGATGTTCA
TCGATGAGGCAGCTGCTAGAAAGCATTTGAAAACAGTtcatttcaaagtc
aaaaacttCCATTGCCCACACTGCGATAAATCGTTTTCACAACGTAACAA
GTTGACCTATCACGTGCGAACACACTCGGGTGAAAAGCCATACTCTTGTG
CTGAGTGCGGTAGAAGCTTCTCGTTGTTGTGGAATCTCAAGACACATTTA
CGAACACATACAGGTACGTTCGACTTATTGAAGACTCATTACGATCTCGT
AGAATTCGAAAATGTCCTTCTCAATCTTAATAATCAATCAATTTCCACCC
AATCAGTTTTTCAATTGCTTTCACAATTTGTGCACCTTTCTAAATAAACG
GTTACCTATCTGTATTTATCATGAGAATTATTTCCCAAATTTTCTAGGTG
AGAAGCCATACGCTTGTGAAATATGTGGTCGCCGATTCacgcaaaaacaa
aacatgacGTCACACTTGACCACTCACAGAAAACCAAAGCCAGACAAAAG
TTTCCGTGCACATTTCAGTAGCGAAATTGAAGAATACGATAACAACGCTG
CCGGAATCATCTCTGGTGGTGATTTCACCAACAAAACTGCCACAGCCGCC
AAGAATTTCCGAGCTTTTGAACAGGCGAAACAATTGAACGCACAGACCAT
TGGTAGTAATCATTACGTGCTTGGTGACATGCAGAACATCGAAGTTCACA
CTGCAAGCGAAACTGGTGGTGATCAGAATGTCAACTTGGAGCACGGGCTA
GGTCTCTTATCCTCTGTTGCGCGTAAGGGTGATTCAACCGATGTCCAAGT
TGACGGGATTGTCAACATCCCTGAAAGCCAGTTCCAATCTGCTGCTTCCA
GTGGAAATATGGACCAAGTTGTCGAAGTGCTCATCAGAAACAACTCCAAC
GAAGACAAAACAAGTAACGTTGGTAGCACACTTTCCGTACAAATGCCTTC
TGGTAATTCACAAAACAAAATCATCCTTGATCCAAGCACACAAGCTGTCA
CAGACGCAGATGGTCAGGAAATTCCTCTTGACACCAACACAGCAGCCAAC
CTTGCAAACATCCTACAAAACCCTGACGTATTGGCTGCCATCAATAATGC
AGCTTCCACCAACAAATTGATCGTCATCGGTCCAGTCAGTATGTTTGATG
GTTCAACTTCACAATCGAGCTCAGTGGTCGCGCTCTCTGCTGCTGATAAT
TCGGCAGATAGTTCGGTCACTACAACTTTCTCACAGGAGCAATTAGCGCA
GATTTCAGCCATGGTTCAACAAGAGCAAACAGCGGCTGCAGCAGCTTCTT
CCCAAGTCTCTTCACAAACAGTCAACGATTCCATTTCAGCTACGTCTGCA
CTAGCTGCTGTCGAAAGCTTTCTTCAAAACGAGCAACAACCAACAAGCTC
CCTCAGTGCTGCCAAAAAT Coding sequence (CDS) from alignment at sc0000120_pilon:751215..755983+ >XLOC_037267 ID=XLOC_037267|Name=XLOC_037267|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4668bp|location=Sequence derived from alignment at sc0000120_pilon:751215..755983+ (Clytia hemisphaerica_ch_hm2_pilon)
aTGCCATCTCCAAGAAAGAAGAAGCTAACTGTTAAAGTTGCTTTAACTCC
AAGTCGAAGCAGAAGTGCTAGAATTAAGGCCAATGAAGTTAAGAAGGAGG
AAGTGGATGATGAGAAGCCTACAACATCTAGAAGAAATTTGCAGAAAAAG
ACAAACTCACCTAGAGaTGCCATCTCCAAGAAAGAAGAAGCTAACTGTTA
AAGTTGCTTTAACTCCAAGTCGAAGCAGAAGTGCTAGAATTAAGGCCAAT
GAAGTTAAGAAGGAGGAAGTGGATGATGAGAAGCCTACAACATCTAGAAG
AAATTTGCAGAAAAAGACAAACTCACCTAGAGgAAAGGGTGGTCTTTCCA
CTCGGGACAAATCAAAGAAATCGGCTAAAGGAAAAGGTTCAAATCAATCT
TCTAAAATGACAGTTTTGGCGTTAGCTGCAGCACGAAAAAGAAAGTTAAA
CGGTGAAGACGATGACGAAGATGAAGATGAGaaacctaaaagagctaaaa
gaaaaaaggttgttaaaaaggAAAGGGTGGTCTTTCCACTCGGGACAAAT
CAAAGAAATCGGCTAAAGGAAAAGGTTCAAATCAATCTTCTAAAATGACA
GTTTTGGCGTTAGCTGCAGCACGAAAAAGAAAGTTAAACGGTGAAGACGA
TGACGAAGATGAAGATGAGaaacctaaaagagctaaaagaaaaaaggttg
ttaaaaagACTGGTCGTAAAAAAGCTGTTCaaaaaaaGACCACTTCCAAT
TATCTGGATCCTATTGATGAAAACAACGAAGAGACTGGTCGTAAAAAAGC
TGTTCaaaaaaaGACCACTTCCAATTATCTGGATCCTATTGATGAAAACA
ACGAAGAGGGTTTGGAAGAGGACGCATTAGAAGAGCAACAAATGTTAGCA
GCAGTGAAAGAAGAGAACGAGTTGAGTGCATTGGGAAGCAGTGGTGTTGG
TGATgaggaagatgaagaagatgatgatCTAGATGAAGGTGACCAAGATG
TAGAAGACGGAGAAgacgaggctgaaactttggctgaggatgatgacgag
gacgatgatgatgatgacgatgaagTGGCTGAAGATGAACAGAACCAAGG
AATCTTCATCAGTGATGAGCATCAATACATTGAAACTATGAATCATGAGC
ATACTGAAGCGTCACACCATGAGGTGATTGAAGAATCTGAAATTGAGGGT
TTGGAAGAGGACGCATTAGAAGAGCAACAAATGTTAGCAGCAGTGAAAGA
AGAGAACGAGTTGAGTGCATTGGGAAGCAGTGGTGTTGGTGATgaggaag
atgaagaagatgatgatCTAGATGAAGGTGACCAAGATGTAGAAGACGGA
GAAgacgaggctgaaactttggctgaggatgatgacgaggacgatgatga
tgatgacgatgaagTGGCTGAAGATGAACAGAACCAAGGAATCTTCATCA
GTGATGAGCATCAATACATTGAAACTATGAATCATGAGCATACTGAAGCG
TCACACCATGAGGTGATTGAAGAATCTGAAATTGAGGTACCACAAGAGCA
GGTGCAAGCTGAACTACAAGAACAACAGGAGCaagaagatgatgaagatg
aaaatgatgacgatgaagacattgatgaaaaCCTCTTCTTTGGAATCCCT
GAACAACGCTCACCTGAGCTTGCAACATGCACACATTGCAAAGGTACCAC
AAGAGCAGGTGCAAGCTGAACTACAAGAACAACAGGAGCaagaagatgat
gaagatgaaaatgatgacgatgaagacattgatgaaaaCCTCTTCTTTGG
AATCCCTGAACAACGCTCACCTGAGCTTGCAACATGCACACATTGCAAAG
GTAAATTCCGTAAAGAAGATGTCCACGAGCACATGTTAACTTGTCCAGAA
CGATATGTACAATGTCGAGAGTGCGGAAAGATTTTATCCAATCTTCAAAC
ACTAGAGCGTCACCATAAAAGGTTTCATCTCAAGATCCGAGAAGTTCCGT
GCACTTTATGCGATAAGATGTTCATCGATGAGGCAGCTGCTAGAAAGCAT
TTGAAAACAGTtcatttcaaagtcaaaaacttCCATTGCCCACACTGCGA
TAAATCGTTTTCACAACGTAACAAGTTGACCTATCACGTGCGAACACACT
CGGGTGAAAAGCCATACTCTTGTGCTGAGTGCGGTAGAAGCTTCTCGTTG
TTGTGGAATCTCAAGACACATTTACGAACACATACAGGTAAATTCCGTAA
AGAAGATGTCCACGAGCACATGTTAACTTGTCCAGAACGATATGTACAAT
GTCGAGAGTGCGGAAAGATTTTATCCAATCTTCAAACACTAGAGCGTCAC
CATAAAAGGTTTCATCTCAAGATCCGAGAAGTTCCGTGCACTTTATGCGA
TAAGATGTTCATCGATGAGGCAGCTGCTAGAAAGCATTTGAAAACAGTtc
atttcaaagtcaaaaacttCCATTGCCCACACTGCGATAAATCGTTTTCA
CAACGTAACAAGTTGACCTATCACGTGCGAACACACTCGGGTGAAAAGCC
ATACTCTTGTGCTGAGTGCGGTAGAAGCTTCTCGTTGTTGTGGAATCTCA
AGACACATTTACGAACACATACAGGTGAGAAGCCATACGCTTGTGAAATA
TGTGGTCGCCGATTCacgcaaaaacaaaacatgacGTCACACTTGACCAC
TCACAGAAAACCAAAGCCAGACAAAAGTTTCCGTGCACATTTCAGTAGCG
AAATTGAAGAATACGATAACAACGCTGCCGGAATCATCTCTGGTGGTGAT
TTCACCAACAAAACTGCCACAGCCGCCAAGAATTTCCGAGCTTTTGAACA
GGCGAAACAATTGAACGCACAGACCATTGGTAGTAATCATTACGTGCTTG
GTGACATGCAGAACATCGAAGTTCACACTGCAAGCGAAACTGGTGGTGAT
CAGAATGTCAACTTGGAGCACGGGCTAGGTCTCTTATCCTCTGTTGCGCG
TAAGGGTGATTCAACCGATGTCCAAGTTGACGGGATTGTCAACATCCCTG
AAAGCCAGTTCCAATCTGCTGCTTCCAGTGGAAATATGGACCAAGTTGTC
GAAGTGCTCATCAGAAACAACTCCAACGAAGACAAAACAAGTAACGTTGG
TAGCACACTTTCCGTACAAATGCCTTCTGGTAATTCACAAAACAAAATCA
TCCTTGATCCAAGCACACAAGCTGTCACAGACGCAGATGGTCAGGAAATT
CCTCTTGACACCAACACAGCAGCCAACCTTGCAAACATCCTACAAAACCC
TGACGTATTGGCTGCCATCAATAATGCAGCTTCCACCAACAAATTGATCG
TCATCGGTCCAGTCAGTATGTTTGATGGTTCAACTTCACAATCGAGCTCA
GTGGTCGCGCTCTCTGCTGCTGATAATTCGGCAGATAGTTCGGTCACTAC
AACTTTCTCACAGGAGCAATTAGCGCAGATTTCAGCCATGGTTCAACAAG
AGCAAACAGCGGCTGCAGCAGCTTCTTCCCAAGTCTCTTCACAAACAGTC
AACGATTCCATTTCAGCTACGTCTGCACTAGCTGCTGTCGAAAGCTTTCT
TCAAAACGAGCAACAACCAACAAGCTCCCTCAGTGCTGCCAAAAATGTGA
GAAGCCATACGCTTGTGAAATATGTGGTCGCCGATTCacgcaaaaacaaa
acatgacGTCACACTTGACCACTCACAGAAAACCAAAGCCAGACAAAAGT
TTCCGTGCACATTTCAGTAGCGAAATTGAAGAATACGATAACAACGCTGC
CGGAATCATCTCTGGTGGTGATTTCACCAACAAAACTGCCACAGCCGCCA
AGAATTTCCGAGCTTTTGAACAGGCGAAACAATTGAACGCACAGACCATT
GGTAGTAATCATTACGTGCTTGGTGACATGCAGAACATCGAAGTTCACAC
TGCAAGCGAAACTGGTGGTGATCAGAATGTCAACTTGGAGCACGGGCTAG
GTCTCTTATCCTCTGTTGCGCGTAAGGGTGATTCAACCGATGTCCAAGTT
GACGGGATTGTCAACATCCCTGAAAGCCAGTTCCAATCTGCTGCTTCCAG
TGGAAATATGGACCAAGTTGTCGAAGTGCTCATCAGAAACAACTCCAACG
AAGACAAAACAAGTAACGTTGGTAGCACACTTTCCGTACAAATGCCTTCT
GGTAATTCACAAAACAAAATCATCCTTGATCCAAGCACACAAGCTGTCAC
AGACGCAGATGGTCAGGAAATTCCTCTTGACACCAACACAGCAGCCAACC
TTGCAAACATCCTACAAAACCCTGACGTATTGGCTGCCATCAATAATGCA
GCTTCCACCAACAAATTGATCGTCATCGGTCCAGTCAGTATGTTTGATGG
TTCAACTTCACAATCGAGCTCAGTGGTCGCGCTCTCTGCTGCTGATAATT
CGGCAGATAGTTCGGTCACTACAACTTTCTCACAGGAGCAATTAGCGCAG
ATTTCAGCCATGGTTCAACAAGAGCAAACAGCGGCTGCAGCAGCTTCTTC
CCAAGTCTCTTCACAAACAGTCAACGATTCCATTTCAGCTACGTCTGCAC
TAGCTGCTGTCGAAAGCTTTCTTCAAAACGAGCAACAACCAACAAGCTCC
CTCAGTGCTGCCAAAAAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:751215..755983 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1315-2334:3750 |
| Aaloc | 928-1311:3179 |
| Aaloc | 769-924:2794 |
| Aaloc | 430-768:2133 |
| Aaloc | 355-429:1608 |
| Aaloc | 169-354:547 |
| Aaloc | 1-165:1 |
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