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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:706344..708392+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037265 ID=XLOC_037265|Name=XLOC_037265|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2049bp|location=Sequence derived from alignment at sc0000120_pilon:706344..708392+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGGCAGTTAGACTTAAGTTCAGTCACTCATAATGACACAGAGAAAAT
CATCCCTACAAATGAACCTTTAAAGAAGCCGCCACTTCCACAGATTGATC
TCAAATGTAACATCGAAAAAGACGTTATTCCCCAGTCTAATGAGAACGGT
GGAATCGAGGCTAATGTAGTTGTTAACGAGAACGGAGAATTAACATCAGC
TCGGTCGTCACGATCGAGTAGTTTGAATTCTAATGATAACAAAATGTCAA
GTGTAAACCGACCTTTAAACGGAGGAGGGCCCGCTTATGAGAGAagatta
ttgaaaaagaaactgaCAGTGCCTGAGATTtcgtttgatgatttttcggT
AGATGACTACCATGTCGATGATGAAACGAGAAATCGAATTCTCGATTACA
AAAGTGATGCCGAAAAATACTCGGTGGGAGTCGTTAGACATCGGAAATAT
AGTTTTAACGACAAATTAAGACATTTGGTTGATGTGGCCACACATCATAA
TCATCACAAAGATCAACCGACAATGACAACAACAGCACCGAGTAATAAGG
AAAAAGCAGCCGCAGCCGTTAAGAAACTCATCAAATCACCGAGTTTGTTA
AGAAAAAGTCCATCATTCAGTAAAACGACCGACTCTTGTGTGTCATCTTC
GACCGAGAACGAACAACGAGAAAAGCGGAAGAAACGAAAAATATCGCTCG
GTAAACGAACTCGTAAATCGTCGAAAGGACCGATCGAAAAACCGAAAGAA
CCGGATGACGAGAAAGAAATTTCAAGCAAACCAGAACGAACCACAAAATT
TCGGCGCCGTAAATTAGTCAAATCACAAAGTGAATCATCACTCGCCATGT
ATAATGTCAGTAAATCCAAAATGATTTTACTTTATTCCGGTGATTCACCT
GCGAAACGTAACAACAGTACATCACATTCCAATCGAAACAGAGTTGATAT
CTTACGAAAAGAAAGTATGGATAGTCGAAGCTCTTCGGAATACGAAGAAT
GCAGTAGCGCGCTATCTGATTTCGAAACTGTTCATAACAGCGGTACGAAA
TCGCGTAAAGTACGATCGAATTTCGCGAAACGTGTTTGGAAATCAATCAA
TAGTTTATTATTCGATGAACAATCCTCACCTCCACAAACCAAACATTTAA
ACACGCCTCCCTCGATTAGAAGACGCCATTCGACTAAATCGTATAAAAAA
TCACGTTCCATGCCGACTGGTTTGAATCGGATCAAATCGTTTAGTGGTCG
TAAAACGTCCCTTTTACGCGGTGACGATACGATTAGAGACGATTTCACat
taatgaaaaagaagaactcCCTTGATATGTCAATGAAATTTTTAGGCGTG
CCGAGTCGATCATGTTCTAAGGAACACGTGGACATTAAGAATAGCAAACG
CAGTAAAAGCAtggattttttaaatgatcattCACTGCTGCGTAGTAAAT
CCAGTGACATGTTATTTGAGAAACGAAAGAAAGCTCACTCCACTATAACG
TCTCGCGAACATCGTAAAAACGTTTGTAAGCAGGGTCTACACTATAAAAT
CATCGTTTCACATGCGCCTATTGCTGATTATCAAAATATCGAAGAGGCGC
TAGAGTTACCAGAACTAACAAACACTGACGAACATGAAATGCCATCCACA
CCAATATTACAATCGAAAATGAAGACGGGTCAAGAGAGACGCAAAGATTA
CGTTAAAGTTCGTTTACAAGACATGAAGGCCACGTGTCAACGTGAACTTG
AGACTTTTTTGGTGGGAAAAGAATATCACGCAGAGAATGTGAACCAATGG
TGTCGCACGCTCAGCGAATCTATCCAATCACGTATCGTGCAAATCACGGA
AGACAATTATAAGATCGTGGCTCAGGTATTTATCGGTGCTTTGTTTGATG
ATGGCATCCACGCGGCGGTGCAATGCACGACGAGCAATAacaatgataat
tttttcacgGTGACTTTCAAAGGCAAAGATATGTTTGTCGTAGCTTCGGT
GATGACTTTCGAAATTTCGCCGCTTGACACAGGAAATAGTTCTTTGTAG Coding sequence (CDS) from alignment at sc0000120_pilon:706344..708392+ >XLOC_037265 ID=XLOC_037265|Name=XLOC_037265|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4098bp|location=Sequence derived from alignment at sc0000120_pilon:706344..708392+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCGGCAGTTAGACTTAAGTTCAGTCACTCATAATGACACAGAGAAAAT
CATCCCTACAAATGAACCTTTAAAGAAGCCGCCACTTCCACAGATTGATC
TCAAATGTAACATCGAAAAAGACGTTATTCCCCAGTCTAATGAGAACGGT
GGAATCGAGGCTAATGTAGTTGTTAACGAGAACGGAGAATTAACATCAGC
TCGGTCGTCACGATCGAGTAGTTTGAATTCTAATGATAACAAAATGTCAA
GTGTAAACCGACCTTTAAACGGAGGAGGGCCCGCTTATGAGAGAagatta
ttgaaaaagaaactgaCAGTGCCTGAGATTtcgtttgatgatttttcggT
AGATGACTACCATGTCGATGATGAAACGAGAAATCGAATTCTCGATTACA
AAAGTGATGCCGAAAAATACTCGGTGGGAGTCGTTAGACATCGGAAATAT
AGTTTTAACGACAAATTAAGACATTTGGTTGATGTGGCCACACATCATAA
TCATCACAAAGATCAACCGACAATGACAACAACAGCACCGAGTAATAAGG
AAAAAGCAGCCGCAGCCGTTAAGAAACTCATCAAATCACCGAGTTTGTTA
AGAAAAAGTCCATCATTCAGTAAAACGACCGACTCTTGTGTGTCATCTTC
GACCGAGAACGAACAACGAGAAAAGCGGAAGAAACGAAAAATATCGCTCG
GTAAACGAACTCGTAAATCGTCGAAAGGACCGATCGAAAAACCGAAAGAA
CCGGATGACGAGAAAGAAATTTCAAGCAAACCAGAACGAACCACAAAATT
TCGGCGCCGTAAATTAGTCAAATCACAAAGTGAATCATCACTCGCCATGT
ATAATGTCAGTAAATCCAAAATGATTTTACTTTATTCCGGTGATTCACCT
GCGAAACGTAACAACAGTACATCACATTCCAATCGAAACAGAGTTGATAT
CTTACGAAAAGAAAGTATGGATAGTCGAAGCTCTTCGGAATACGAAGAAT
GCAGTAGCGCGCTATCTGATTTCGAAACTGTTCATAACAGCGGTACGAAA
TCGCGTAAAGTACGATCGAATTTCGCGAAACGTGTTTGGAAATCAATCAA
TAGTTTATTATTCGATGAACAATCCTCACCTCCACAAACCAAACATTTAA
ACACGCCTCCCTCGATTAGAAGACGCCATTCGACTAAATCGTATAAAAAA
TCACGTTCCATGCCGACTGGTTTGAATCGGATCAAATCGTTTAGTGGTCG
TAAAACGTCCCTTTTACGCGGTGACGATACGATTAGAGACGATTTCACat
taatgaaaaagaagaactcCCTTGATATGTCAATGAAATTTTTAGGCGTG
CCGAGTCGATCATGTTCTAAGGAACACGTGGACATTAAGAATAGCAAACG
CAGTAAAAGCAtggattttttaaatgatcattCACTGCTGCGTAGTAAAT
CCAGTGACATGTTATTTGAGAAACGAAAGAAAGCTCACTCCACTATAACG
TCTCGCGAACATCGTAAAAACGTTTGTAAGCAGGGTCTACACTATAAAAT
CATCGTTTCACATGCGCCTATTGCTGATTATCAAAATATCGAAGAGGCGC
TAGAGTTACCAGAACTAACAAACACTGACGAACATGAAATGCCATCCACA
CCAATATTACAATCGAAAATGAAGACGGGTCAAGAGAGACGCAAAGATTA
CGTTAAAGTTCGTTTACAAGACATGAAGGCCACGTGTCAACGTGAACTTG
AGACTTTTTTGGTGGGAAAAGAATATCACGCAGAGAATGTGAACCAATGG
TGTCGCACGCTCAGCGAATCTATCCAATCACGTATCGTGCAAATCACGGA
AGACAATTATAAGATCGTGGCTCAGGTATTTATCGGTGCTTTGTTTGATG
ATGGCATCCACGCGGCGGTGCAATGCACGACGAGCAATAacaatgataat
tttttcacgGTGACTTTCAAAGGCAAAGATATGTTTGTCGTAGCTTCGGT
GATGACTTTCGAAATTTCGCCGCTTGACACAGGAAATAGTTCTTTGTAGA
TGCGGCAGTTAGACTTAAGTTCAGTCACTCATAATGACACAGAGAAAATC
ATCCCTACAAATGAACCTTTAAAGAAGCCGCCACTTCCACAGATTGATCT
CAAATGTAACATCGAAAAAGACGTTATTCCCCAGTCTAATGAGAACGGTG
GAATCGAGGCTAATGTAGTTGTTAACGAGAACGGAGAATTAACATCAGCT
CGGTCGTCACGATCGAGTAGTTTGAATTCTAATGATAACAAAATGTCAAG
TGTAAACCGACCTTTAAACGGAGGAGGGCCCGCTTATGAGAGAagattat
tgaaaaagaaactgaCAGTGCCTGAGATTtcgtttgatgatttttcggTA
GATGACTACCATGTCGATGATGAAACGAGAAATCGAATTCTCGATTACAA
AAGTGATGCCGAAAAATACTCGGTGGGAGTCGTTAGACATCGGAAATATA
GTTTTAACGACAAATTAAGACATTTGGTTGATGTGGCCACACATCATAAT
CATCACAAAGATCAACCGACAATGACAACAACAGCACCGAGTAATAAGGA
AAAAGCAGCCGCAGCCGTTAAGAAACTCATCAAATCACCGAGTTTGTTAA
GAAAAAGTCCATCATTCAGTAAAACGACCGACTCTTGTGTGTCATCTTCG
ACCGAGAACGAACAACGAGAAAAGCGGAAGAAACGAAAAATATCGCTCGG
TAAACGAACTCGTAAATCGTCGAAAGGACCGATCGAAAAACCGAAAGAAC
CGGATGACGAGAAAGAAATTTCAAGCAAACCAGAACGAACCACAAAATTT
CGGCGCCGTAAATTAGTCAAATCACAAAGTGAATCATCACTCGCCATGTA
TAATGTCAGTAAATCCAAAATGATTTTACTTTATTCCGGTGATTCACCTG
CGAAACGTAACAACAGTACATCACATTCCAATCGAAACAGAGTTGATATC
TTACGAAAAGAAAGTATGGATAGTCGAAGCTCTTCGGAATACGAAGAATG
CAGTAGCGCGCTATCTGATTTCGAAACTGTTCATAACAGCGGTACGAAAT
CGCGTAAAGTACGATCGAATTTCGCGAAACGTGTTTGGAAATCAATCAAT
AGTTTATTATTCGATGAACAATCCTCACCTCCACAAACCAAACATTTAAA
CACGCCTCCCTCGATTAGAAGACGCCATTCGACTAAATCGTATAAAAAAT
CACGTTCCATGCCGACTGGTTTGAATCGGATCAAATCGTTTAGTGGTCGT
AAAACGTCCCTTTTACGCGGTGACGATACGATTAGAGACGATTTCACatt
aatgaaaaagaagaactcCCTTGATATGTCAATGAAATTTTTAGGCGTGC
CGAGTCGATCATGTTCTAAGGAACACGTGGACATTAAGAATAGCAAACGC
AGTAAAAGCAtggattttttaaatgatcattCACTGCTGCGTAGTAAATC
CAGTGACATGTTATTTGAGAAACGAAAGAAAGCTCACTCCACTATAACGT
CTCGCGAACATCGTAAAAACGTTTGTAAGCAGGGTCTACACTATAAAATC
ATCGTTTCACATGCGCCTATTGCTGATTATCAAAATATCGAAGAGGCGCT
AGAGTTACCAGAACTAACAAACACTGACGAACATGAAATGCCATCCACAC
CAATATTACAATCGAAAATGAAGACGGGTCAAGAGAGACGCAAAGATTAC
GTTAAAGTTCGTTTACAAGACATGAAGGCCACGTGTCAACGTGAACTTGA
GACTTTTTTGGTGGGAAAAGAATATCACGCAGAGAATGTGAACCAATGGT
GTCGCACGCTCAGCGAATCTATCCAATCACGTATCGTGCAAATCACGGAA
GACAATTATAAGATCGTGGCTCAGGTATTTATCGGTGCTTTGTTTGATGA
TGGCATCCACGCGGCGGTGCAATGCACGACGAGCAATAacaatgataatt
ttttcacgGTGACTTTCAAAGGCAAAGATATGTTTGTCGTAGCTTCGGTG
ATGACTTTCGAAATTTCGCCGCTTGACACAGGAAATAGTTCTTTGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:706344..708392 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2049:1 |
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