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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:565235..569100+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037257 ID=XLOC_037257|Name=XLOC_037257|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3866bp|location=Sequence derived from alignment at sc0000120_pilon:565235..569100+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGAGATTCAATGTATTGTTGTGCAGAAGCATCACCGAAACTTGTT
GGGCAACAAAGGCAAATATGTTCAAGACATTAGCGCCAAGTTCAGCGTTC
AGATCAAATTTCCTGATCGCCGAAAAGCTGAAGACCCACCGCTCGATGAG
GCTCCACCAGAGGGTGAAGTGAATAAGAATGATATCATTATTATTCTTGG
TAGAAAAGATAATGCTGAAAACGCTAAAGCCGCTCTTATGGTATGTTTCC
CATACTCTTTGAACGTTGTTGTTGCTCTGttttacaatttcattttcatc
attgaaATTTCTAGTTGATAAGTTATAATGTATACGAATGAAAGAGTACG
TATGATTTCTCTTTAACTGTATCATTAACCATCATCCTTTGTGGCTATTA
ACTAACGTAAAACACTTACTTCAGGAATTGATTCCAGTTTCAAAAGAAGT
AATGATCCCCTTCGACAATCACCGTTTCATTATCGGACAAAAAGGTGCCG
GCATCCGAAAATTGATGGATGACCATGACGTCAACATTAACGTACCACCA
CCAGAACGTAAAGAAGAAATCATCATTGTTACCGGACCAATTGCCAACGT
TGAGAAAGCTATTATTGCTTTGAATGTTCGCAATGATGAAATTGAATCTG
GGAATGAAGATCGCCGTTTGAGACAATTCGAATTGATTTTGGATGTTCCA
CACAGACATCACCCTAAattgattggtaagttttgattgattgattgatt
gattgattgatttttctaaatttgacattgTTTATAAAATTCTTAATCGA
ATCGAATATTATTGCCCAAAAAGTTCGAAAGTCAAGAACTCTCATTTTGT
TTCTATACCATGAGTCTGCCAGcatgtgtttttcttttttgcgtttggtt
tctaattgtttttCAATCGGCTACTTCCGGTTGATGATGCCTCAAGCTTT
AGCCGACAATCAACTTAATTGCTGTAAATGGACACATTTTTATGACTTCC
TATATACAGATTCACGATTGTCATTATAAACCGCTTTTTGTTCGCTAATA
ACAATGTTTCTTAAATTTCCTTTGCTATTAAGGGAacaaaaaacaagatt
ttttccAGGGACCGCCAAACTTTGAATTCAGTGcctaattttcaaagttt
tagtcCCAGCTTTACGATACTTCTTTCCATAGACAACCCACTAATACACA
CTTCTTATTATAAATCAACATCATTgcaggcctcgttttcaaatgaaata
attatttcaaacgACATTTGCAcatctaccttaaaggaagaaattttggc
gggaatttaatttggcggatggccaaaaaagttttttcagagggaattta
atttggcggatggacgaaaaaaactaaatttggcgggaatttaatttggc
ggtcgcttaaaaatttaaccttaaagatggcgtcaaaacagcgaaaaaat
accaaaaacaccttaaaagagatcaaattttcaaaatgtttaatttggcg
ggaatttaatttggcggatggcggaaaaaagaaattatggcgggaactta
atttggcggatttcagtcaaatccgccaaatccgccaaattttctttccg
ccaaaatttcttcctttaaggtaaaatgttttcccaaaagaccgttttca
attttgatataaaactGCAAACGCTTGTGCCAACATTAATTATGTCTGAT
GGCGTTGCAGTATCTTCgtaaaaatattctgaaaacgAGGACCGCACTTA
TTTTTCATATAGAATAACCAAATTTGTTTTCCTATACAGGACGCAAAGGT
GCCGTCATTCAAAAACTTCGCGATGATTTTGGTGTCATGATTAATGTTCC
CTCTCCCAAGACCCCCACTGAAGATGATAAGGCTGACCAGATTAAACTCA
TTGGTTACGAAGACAGATGCGTGAAAGCTAAGGCTGCTATCGACGAGATG
ATCCGAGAATTGGTACGTTTTATATTTCCTTCTTTTCCACTGTTTCTATC
CTTTGATTGGTAAAATAATTATCAAGTCACCAAAACTATCCTGTTAACTT
TCTGCATTctccaaatttaaaaatactcTCAAGTCTGTTAAGTCTATTTT
AAGTCTTGTATGAAAAATCTATTTACTTCCATCACTGATGGATGTCAAAT
AATAAATGCCACATTTATTTAAAATGAATCTTCCAATGATGACTAGCTTA
GGCTAGATTTGCTAATCCCAGCTCTCTGAGAACTTCCTGACTGAGAAAAG
CAACTGAGGTAGATTCGACTTTAACAGTGCTTATGATGAATTGCATTTCG
CGACGTTTTTGAGACTCTGAAAGGATATCATTTATCGTAATAGTTTAAGG
GCTGGTCTCCAATTTCGCGTGAAACTTTCTAACGTTTTTGtatgtaaggt
cattggtcggttggaAAAGGAAGCAATTTTATTGGGcaaatctgacgtaa
cggtttaaaaaagttgaacttctctcaactttttctttcgctggaaactt
ttttgatgacgtaatcttttctgcaGGCAAAAACGATTACTTTAATAATT
taagcgtatattagcgagtcaggaaaatcttgattttttttggatttatt
ttagcgaatcacgatttcaaaaaatttcgcgtggataaattttagcgaat
actcgtattataTTATTAAccgaattcgttttctagcatttctttgcact
gaaatcctttttattgataaaaatgtatcaaggcaatataaccagaaatt
tcgcacAGATAAATTTTAGAAATCTGTCGATTCGGTGttttttagcgaga
tttattttagcgaaaatagggaaaactcgctaaaacgctaaaattagtct
cgctaaaatttttacaattaaagTCACTAAAAGTTATCGgtcatttcgcg
cgaaagtggagagcGGCCTTTaacagttttaaaacaaaaggaaGAACGAT
TTTTGCTCCCTATCTGAACACACtttcttttgtgaattttgcTAACTATT
TTCTCATCTAACCATAGGAAGAACAAATGGTCATGGAAATCGAAATCGAC
AGTCGTATACACAACCGCATCATTGGCCCGCGTGGAAAGAGCGTCCGCAA
ATTGATGGATCAGTTCAAGGTGGACATCCGATTCCCGAAAGGCGAAAAAG
ACAAGTGTGTAGTGACTGGACTTGAAGAAAACTGTGAAGCGTGTAAAGAA
CACTTGCAAATGTTGGAGGAAGAATATGTAAGTGTTATCCACTGATCTTT
AACTACTTGACTGGGTCGGGCTACCCGTATATATAAGAAGCGTGTCCAGA
TTTAGAGTTGACTTGTCAGCGGTTAGCCCATCTATTGTATaaagaatatg
atatctgtggTGTTATctttcaaagatattttttttgttttctaactCGA
CATATCCCTGCTGACATAAAATGGTTATAGTGCGTCGTGTTGTGGATGTT
AGACTGGCATTGTTTTTACATTATTTGCTGGCTGAGATGGATTGAGTCTG
GAATGTCAAAGGTCCATTATTGTCAATAGAACGCTAACTCGttttttcat
tgtaatttttatttttcttctttagatgGAAGAAGTGAATGAGCGAGCCC
AAGAAAGAGACATGATGGATGCTTACATGGCGCCACGTCGTGGTGGTGGC
GGTAACGCCCGTGGTGGAAACGATCTCTTCGGTTACGTCGTTAAGGATGC
TCCTTGGAACGGTTCCGCTCAAAACGGAAAATCTGCTCCAGCTCCCGAAA
ACCCGAAATCTGTTTCAGTTCCCGATGCTGGAAACGAATCTGAATTTCCA
GATCTTGGTTTGAAAGCTGCAAGTAATGGTCAAGGCAAAGCTTGGGGACC
ATGGGGCAACCACTAA Coding sequence (CDS) from alignment at sc0000120_pilon:565235..569100+ >XLOC_037257 ID=XLOC_037257|Name=XLOC_037257|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2430bp|location=Sequence derived from alignment at sc0000120_pilon:565235..569100+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGAGATTCAATGTATTGTTGTGCAGAAGCATCACCGAAACTTGTT
GGGCAACAAAGGCAAATATGTTCAAGACATTAGCGCCAAGTTCAGCGTTC
AGATCAAATTTCCTGATCGCCGAAAAGCTGAAGACCCACCGCTCGATGAG
GCTCCACCAGAGGGTGAAGTGAATAAGAATGATATCATTATTATTCTTGG
TAGAAAAGATAATGCTGAAAACGCTAAAGCCGCTCTTATGATGACTGAGA
TTCAATGTATTGTTGTGCAGAAGCATCACCGAAACTTGTTGGGCAACAAA
GGCAAATATGTTCAAGACATTAGCGCCAAGTTCAGCGTTCAGATCAAATT
TCCTGATCGCCGAAAAGCTGAAGACCCACCGCTCGATGAGGCTCCACCAG
AGGGTGAAGTGAATAAGAATGATATCATTATTATTCTTGGTAGAAAAGAT
AATGCTGAAAACGCTAAAGCCGCTCTTATGGAATTGATTCCAGTTTCAAA
AGAAGTAATGATCCCCTTCGACAATCACCGTTTCATTATCGGACAAAAAG
GTGCCGGCATCCGAAAATTGATGGATGACCATGACGTCAACATTAACGTA
CCACCACCAGAACGTAAAGAAGAAATCATCATTGTTACCGGACCAATTGC
CAACGTTGAGAAAGCTATTATTGCTTTGAATGTTCGCAATGATGAAATTG
AATCTGGGAATGAAGATCGCCGTTTGAGACAATTCGAATTGATTTTGGAT
GTTCCACACAGACATCACCCTAAattgattgGAATTGATTCCAGTTTCAA
AAGAAGTAATGATCCCCTTCGACAATCACCGTTTCATTATCGGACAAAAA
GGTGCCGGCATCCGAAAATTGATGGATGACCATGACGTCAACATTAACGT
ACCACCACCAGAACGTAAAGAAGAAATCATCATTGTTACCGGACCAATTG
CCAACGTTGAGAAAGCTATTATTGCTTTGAATGTTCGCAATGATGAAATT
GAATCTGGGAATGAAGATCGCCGTTTGAGACAATTCGAATTGATTTTGGA
TGTTCCACACAGACATCACCCTAAattgattgGACGCAAAGGTGCCGTCA
TTCAAAAACTTCGCGATGATTTTGGTGTCATGATTAATGTTCCCTCTCCC
AAGACCCCCACTGAAGATGATAAGGCTGACCAGATTAAACTCATTGGTTA
CGAAGACAGATGCGTGAAAGCTAAGGCTGCTATCGACGAGATGATCCGAG
AATTGGACGCAAAGGTGCCGTCATTCAAAAACTTCGCGATGATTTTGGTG
TCATGATTAATGTTCCCTCTCCCAAGACCCCCACTGAAGATGATAAGGCT
GACCAGATTAAACTCATTGGTTACGAAGACAGATGCGTGAAAGCTAAGGC
TGCTATCGACGAGATGATCCGAGAATTGGAAGAACAAATGGTCATGGAAA
TCGAAATCGACAGTCGTATACACAACCGCATCATTGGCCCGCGTGGAAAG
AGCGTCCGCAAATTGATGGATCAGTTCAAGGTGGACATCCGATTCCCGAA
AGGCGAAAAAGACAAGTGTGTAGTGACTGGACTTGAAGAAAACTGTGAAG
CGTGTAAAGAACACTTGCAAATGTTGGAGGAAGAATATGAAGAACAAATG
GTCATGGAAATCGAAATCGACAGTCGTATACACAACCGCATCATTGGCCC
GCGTGGAAAGAGCGTCCGCAAATTGATGGATCAGTTCAAGGTGGACATCC
GATTCCCGAAAGGCGAAAAAGACAAGTGTGTAGTGACTGGACTTGAAGAA
AACTGTGAAGCGTGTAAAGAACACTTGCAAATGTTGGAGGAAGAATATat
gGAAGAAGTGAATGAGCGAGCCCAAGAAAGAGACATGATGGATGCTTACA
TGGCGCCACGTCGTGGTGGTGGCGGTAACGCCCGTGGTGGAAACGATCTC
TTCGGTTACGTCGTTAAGGATGCTCCTTGGAACGGTTCCGCTCAAAACGG
AAAATCTGCTCCAGCTCCCGAAAACCCGAAATCTGTTTCAGTTCCCGATG
CTGGAAACGAATCTGAATTTCCAGATCTTGGTTTGAAAGCTGCAAGTAAT
GGTCAAGGCAAAGCTTGGGGACCATGGGGCAACCACTAAatgGAAGAAGT
GAATGAGCGAGCCCAAGAAAGAGACATGATGGATGCTTACATGGCGCCAC
GTCGTGGTGGTGGCGGTAACGCCCGTGGTGGAAACGATCTCTTCGGTTAC
GTCGTTAAGGATGCTCCTTGGAACGGTTCCGCTCAAAACGGAAAATCTGC
TCCAGCTCCCGAAAACCCGAAATCTGTTTCAGTTCCCGATGCTGGAAACG
AATCTGAATTTCCAGATCTTGGTTTGAAAGCTGCAAGTAATGGTCAAGGC
AAAGCTTGGGGACCATGGGGCAACCACTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:565235..569100 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 925-1215:3576 |
| Aaloc | 715-924:3018 |
| Aaloc | 544-714:1792 |
| Aaloc | 241-540:425 |
| Aaloc | 1-240:1 |
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