XLOC_037246 (mRNA) -

Overview
NameXLOC_037246
Unique NameXLOC_037246
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000174_pilon:466055..467166+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037246 ID=XLOC_037246|Name=XLOC_037246|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1112bp|location=Sequence derived from alignment at sc0000174_pilon:466055..467166+ (Clytia hemisphaerica_ch_hm2_pilon)
GCATCAGCCAGAATCCGAAAAGAAATGACCAATGCTATGATGCTTGAGCG AAGAAAGAAGAGGACAGAAAAGTAAGCACTCTTGAGTTTTTAAATTTTCT AAATGTAGTTCCTAGCAGCTTAATATCGTCATGTTTTAACTAtgaattgt tttgattttttgtgacTTCCACTATTTTATGATCATATTTTGAAACTATC TTTTCCTTAACCAACTCGACACAATATTTTTCGCTAAATCATGAGAAAAC TTCTAACTAAATGATATTAACCTAATTTTTATCATAATTGCTTCTTTTGA TAATGGCTTTATTCACTACTTTACTTCTAGAGAGCACATGTCAACAATCA GAGAGCGAGAACGTCGTAATCGGCAAGCCATTATTGCGTCCAAAAAGAAC CGCGAAGTAGCCATGCGTAACCTGAAGACAACAATGTCCAAAGTTCGTCA GCGTGAAAGTGAAGAGGAAGACAGAAGTCGAAGTGATTTGAACCAGCGCA TGAGTGCGTTGTTATCTctgaagaaaaatattgaaatgagcaAGGTAAGG AAACAAGGGAAAGGATATGGTTTAAAAGGGATTATCAGATAATTTGActt agagataccttttatggtcTTAAAGAAACACCTCGAAAGTTTTTGACCCA ATCTTTTTCCAAAGCTGAAGTATtcgactttgaattttcaaatttttacc tgaaaacaatagaaattcaacgtaaagactgtgtaaagacttatttttag agatttcaaagcTGATTCCACGATCTTTACGACggtgccaatttttttaa atatccaTTTTCAGACACACAATGTAatggttttggcaaaaaaaaagttt acaaaggGAATTACAGAGTGTTCAAGGTTAATCTTTCAGCAAACAAACTT ATATTTAGACGTATCAAGTCTGACTTACATCTTGTATTATTTGTTTCACT CAGGAAAACATATCCGCAGTGCAAGCACGTGACACGTATAAGAAAAAGCA AGAAGATACAAAGGAGAAAGACGAACGACAAAAATTGTTATTAATGGGTG AAAACCCTGACGAAGTGGTCACTCGTAGGAAAAGAATACGACAATTCGAA AGGGACAAagag

Coding sequence (CDS) from alignment at sc0000174_pilon:466055..467166+

>XLOC_037246 ID=XLOC_037246|Name=XLOC_037246|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=888bp|location=Sequence derived from alignment at sc0000174_pilon:466055..467166+ (Clytia hemisphaerica_ch_hm2_pilon)
GCATCAGCCAGAATCCGAAAAGAAATGACCAATGCTATGATGCTTGAGCG
AAGAAAGAAGAGGACAGAAAAGCATCAGCCAGAATCCGAAAAGAAATGAC
CAATGCTATGATGCTTGAGCGAAGAAAGAAGAGGACAGAAAAAGAGCACA
TGTCAACAATCAGAGAGCGAGAACGTCGTAATCGGCAAGCCATTATTGCG
TCCAAAAAGAACCGCGAAGTAGCCATGCGTAACCTGAAGACAACAATGTC
CAAAGTTCGTCAGCGTGAAAGTGAAGAGGAAGACAGAAGTCGAAGTGATT
TGAACCAGCGCATGAGTGCGTTGTTATCTctgaagaaaaatattgaaatg
agcaAGAGAGCACATGTCAACAATCAGAGAGCGAGAACGTCGTAATCGGC
AAGCCATTATTGCGTCCAAAAAGAACCGCGAAGTAGCCATGCGTAACCTG
AAGACAACAATGTCCAAAGTTCGTCAGCGTGAAAGTGAAGAGGAAGACAG
AAGTCGAAGTGATTTGAACCAGCGCATGAGTGCGTTGTTATCTctgaaga
aaaatattgaaatgagcaAGGAAAACATATCCGCAGTGCAAGCACGTGAC
ACGTATAAGAAAAAGCAAGAAGATACAAAGGAGAAAGACGAACGACAAAA
ATTGTTATTAATGGGTGAAAACCCTGACGAAGTGGTCACTCGTAGGAAAA
GAATACGACAATTCGAAAGGGACAAagagGAAAACATATCCGCAGTGCAA
GCACGTGACACGTATAAGAAAAAGCAAGAAGATACAAAGGAGAAAGACGA
ACGACAAAAATTGTTATTAATGGGTGAAAACCCTGACGAAGTGGTCACTC
GTAGGAAAAGAATACGACAATTCGAAAGGGACAAagag
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_037246XLOC_037246-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000174_pilongenomesc0000174_pilon:466055..467166 +
Properties
Property NameValue
Aaloc286-444:954
Aaloc73-285:332
Aaloc1-69:1