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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:1124394..1127405+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037200 ID=XLOC_037200|Name=XLOC_037200|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3012bp|location=Sequence derived from alignment at sc0000084_pilon:1124394..1127405+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAATCAGTTTATCTTATCAATTTCGAATCATCAATTCGCCTATAAAAGG
AGGTGGACTCAATTTAGAAATTAAAACTcaattcaaaatgaagatacAAC
TTAGCTTATTAGCAATTGTTTGCTTAGTGTTTCCAACACTATCACATTGT
AAGTATGCTTTCATATTTCGCTTTCTTGACCCAACCTTTGTAGCATTTTA
TTTTTCGTATCCATGTGTATTAAACTGTTGAAATTAAATCTACGACATAG
TTCAACTACTGTTTCCAGATCACCCAAATAAAGACATATACGCATGCGTA
AATTCTTGTTCTTTTAACCAGCGTCATTTAGCGTAATATAGCAAAAAGGA
GTGAATAAGTAGGGGTAGTGGCCCTCATAAGGTCGGGGTTGGGTGATAAA
ATGTGCCGTGCTCTTTCgttctttttatcatttgttGTTCTTGTTAGAGG
GTCTGGAAAGGCTGTTGAACAGTCTCCGTCCTCCCTACCagggaaagttt
ttttttcgagttaccccactaaaaaattttttttttgatcagTTTTTGTT
TCAGTAGTAAGGtactttttaagatcattaatatattttgaaaatgcagA
TTCAATCATagttgtcaatataaaaaactgGTAGTCAATTGTTATAACTT
TTTCCTAGTGAAAGCAATGCTtcaaaatcgatttgctcagtttttgatca
cccTACCCAATAATTTTGTTTGGAtttgttcaaaaattaataacatgacc
aaaatttgaggaaaataaACCATTTTATGATTGGTAAGTTTAAGGTGTTA
ACAAAAGGAAGAAACAAGAGGCTTCCatacaaattttgatttttttaagc
aAGTCTGCCatcataaaacataaaatgaaatcCCCTAATTACCCAGATTT
CAGGATTTCAGTATTCTGACCGAAATACAGAATAGATTCTGAAATCTCGT
AGACCTCCACTTTTATGTGGACTATGATTGAATCTAGTCGAAGAGTTATT
ATTTGCTTCCCTACACGAAATATTCATTCTAAATTTCTAATTACTTAACA
GCGTATCAAATCAATGATGTCCAAGATGATTCTCTCTACGATCTAGTATC
ATTGCAACCGAAATCATCCGAATCACAAAGTGATGACAAAAACCGACATG
TCGCCGACATGATTGGTGATGATGACGTTAATAACAAAGAGAATGACAAC
AGTTATGTTTTTGATCCTAATGGTGATGCGATTGGTGAAAATAATGAGAT
CAACCAAGATGTAGAGGATACAAAGTCGGTTGAAGATGGTGATGGTGACT
TTGAGGATGAACAATTGAATGATAACatggatgaaaatgaagatagtGAA
GACGACGACGATGATGAGATTCTCAATGGTAAATAAATCTTTCATAtcat
tttcaaaggttttgtttttaaataagagtgatatcgtttgcttactcatc
aatttcggattgacacgaatgtggagcgaGATTGGTCAgaaggagaaaaa
gaaaaacattttttgcttatatcagcataatataacaatagacactgtcc
tgatatgaaacagaacacttatgtaaaaataaaacctttaagttaaCCTT
TAATTTGATTGATCGACCGCCGggggcggtttctttcatagtggtacgct
aatatcgttttgccttggctcattactttgtctgacatttactttcggtt
tttttaactagattacccaggtgtttctctttttttttccttgaatgtct
tttattcggaattgaataatcgagacatgaaaaatgactatattgtaatc
tgttttcaatgaataatctaaaatgtactggagatgacatgtaggcgtta
ataatgtgcacgcgctctttcgcgagcgtgatgcgtgatggaaggcggtc
gtttcagtgtggtttagattcacactgtgacctagttttaATATACATAT
ATATTGAGTTTTCtgacataaaaacaaaagaaatgaaatccccagccata
aaaaacgtTGGAAAACCAATCCCCACCGAGAGAttcagtccattattttt
atccccactggctgaacaAATCCTGCCGGGTCTGTGGGAAGAGGTTGTGA
AACGGGAATACTTATGTAACAAATGACGGTATACACTCTTAATCTATAGA
TTTCAACGCTAACGAAGAAAATGACAATAGCAATGATGGAggagaagaag
atgaagatgaaaacgagGAAGCAGACACACGAGAACTTGCTGAGAATGCA
GCTGATGAAGAACTTATCCAAGGTTTGACTTTCGattcgtgatatgcacc
actgcaatgacttcacgaaactatgcaacttttctgtttttgttccaccc
aatacgtcactttttctattgtttaaatgacgtattgggtggaaaatctt
aaaagttctcagaagaatctccagtggtgcatatcatgattATTCATATA
TACCCtaggggggaggggtacttaggcaaaatgtgTGCCGAGTATGTGCA
AGCCATAAGGCTCCCTTTtacacaccctcgaaagtctctcaaaggagtCT
ATAAAAACcataaaagaaaattgagtctctgttaaGGCCCACCCAATatc
acgaaatttaaaattttttctctcaaaggaCCGtaactttcaaatgaaaa
tcttttctcCTATAGATCCAGAAGTGCGTTCAATGATGAAAGAGGATCCC
TTGTTTTTTCGACGTGCTATACGACGTATCGGCCGTCGTGTTGTTCGTGT
CGTTCGTCGTGTCGGGAGACGTCGCTTTATACGTCGTGTAGGCAGGACAA
GACTCATACGTCGAGTAACACGACGACGATTTTTACGCCGTATCACACGA
CGTGTAATCCGTCATGTAACACGCCGCCGTTTCTTGGTTTGTCGGGGAAA
ATGCTTTGCCTACAAAATGTGCTTGGCGAAAACGAAAGGGATTGGTTATT
TGATGTGCCGTTTAATCAAGAAAGGATGTCGATGTGGCGTATTTGGATtg
attggaaaataa Coding sequence (CDS) from alignment at sc0000084_pilon:1124394..1127405+ >XLOC_037200 ID=XLOC_037200|Name=XLOC_037200|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1890bp|location=Sequence derived from alignment at sc0000084_pilon:1124394..1127405+ (Clytia hemisphaerica_ch_hm2_pilon)
AGAATCAGTTTATCTTATCAATTTCGAATCATCAATTCGCCTATAAAAGG
AGGTGGACTCAATTTAGAAATTAAAACTcaattcaaaatgaagatacAAC
TTAGCTTATTAGCAATTGTTTGCTTAGTGTTTCCAACACTATCACATTAG
AATCAGTTTATCTTATCAATTTCGAATCATCAATTCGCCTATAAAAGGAG
GTGGACTCAATTTAGAAATTAAAACTcaattcaaaatgaagatacAACTT
AGCTTATTAGCAATTGTTTGCTTAGTGTTTCCAACACTATCACATTCGTA
TCAAATCAATGATGTCCAAGATGATTCTCTCTACGATCTAGTATCATTGC
AACCGAAATCATCCGAATCACAAAGTGATGACAAAAACCGACATGTCGCC
GACATGATTGGTGATGATGACGTTAATAACAAAGAGAATGACAACAGTTA
TGTTTTTGATCCTAATGGTGATGCGATTGGTGAAAATAATGAGATCAACC
AAGATGTAGAGGATACAAAGTCGGTTGAAGATGGTGATGGTGACTTTGAG
GATGAACAATTGAATGATAACatggatgaaaatgaagatagtGAAGACGA
CGACGATGATGAGATTCTCAATGCGTATCAAATCAATGATGTCCAAGATG
ATTCTCTCTACGATCTAGTATCATTGCAACCGAAATCATCCGAATCACAA
AGTGATGACAAAAACCGACATGTCGCCGACATGATTGGTGATGATGACGT
TAATAACAAAGAGAATGACAACAGTTATGTTTTTGATCCTAATGGTGATG
CGATTGGTGAAAATAATGAGATCAACCAAGATGTAGAGGATACAAAGTCG
GTTGAAGATGGTGATGGTGACTTTGAGGATGAACAATTGAATGATAACat
ggatgaaaatgaagatagtGAAGACGACGACGATGATGAGATTCTCAATG
ATTTCAACGCTAACGAAGAAAATGACAATAGCAATGATGGAggagaagaa
gatgaagatgaaaacgagGAAGCAGACACACGAGAACTTGCTGAGAATGC
AGCTGATGAAGAACTTATCCAAGATTTCAACGCTAACGAAGAAAATGACA
ATAGCAATGATGGAggagaagaagatgaagatgaaaacgagGAAGCAGAC
ACACGAGAACTTGCTGAGAATGCAGCTGATGAAGAACTTATCCAAGATCC
AGAAGTGCGTTCAATGATGAAAGAGGATCCCTTGTTTTTTCGACGTGCTA
TACGACGTATCGGCCGTCGTGTTGTTCGTGTCGTTCGTCGTGTCGGGAGA
CGTCGCTTTATACGTCGTGTAGGCAGGACAAGACTCATACGTCGAGTAAC
ACGACGACGATTTTTACGCCGTATCACACGACGTGTAATCCGTCATGTAA
CACGCCGCCGTTTCTTGGTTTGTCGGGGAAAATGCTTTGCCTACAAAATG
TGCTTGGCGAAAACGAAAGGGATTGGTTATTTGATGTGCCGTTTAATCAA
GAAAGGATGTCGATGTGGCGTATTTGGATtgattggaaaataaATCCAGA
AGTGCGTTCAATGATGAAAGAGGATCCCTTGTTTTTTCGACGTGCTATAC
GACGTATCGGCCGTCGTGTTGTTCGTGTCGTTCGTCGTGTCGGGAGACGT
CGCTTTATACGTCGTGTAGGCAGGACAAGACTCATACGTCGAGTAACACG
ACGACGATTTTTACGCCGTATCACACGACGTGTAATCCGTCATGTAACAC
GCCGCCGTTTCTTGGTTTGTCGGGGAAAATGCTTTGCCTACAAAATGTGC
TTGGCGAAAACGAAAGGGATTGGTTATTTGATGTGCCGTTTAATCAAGAA
AGGATGTCGATGTGGCGTATTTGGATtgattggaaaataa
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:1124394..1127405 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 601-945:2668 |
| Aaloc | 478-597:2152 |
| Aaloc | 151-474:1054 |
| Aaloc | 1-147:1 |
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