|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000084_pilon:1072663..1078340- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_037191 ID=XLOC_037191|Name=XLOC_037191|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5678bp|location=Sequence derived from alignment at sc0000084_pilon:1072663..1078340- (Clytia hemisphaerica_ch_hm2_pilon)
ATAGAAAACGAATATTACTTGAAAAATTTGTTAAAAAACAAAATGGCTTC
CCTAACATTGAAAGAGAGTTCATTGACGATGACTTTATCTTTGACAATCC
TGTTCGGTATATTTGTTTCTTCTAATTTGACGGCAGCCGAAACATTTTCT
TGTCACCGTGGAAACTATGCTAATGGAACAGACAATGCTCAGCCAGACAA
AAACTGCAGTAAGTTATTTTTTATTTATAGCATAGGTAACACGAACAAAT
AGTACAACACACAATGTGGATATCCCACAATGTTCCTAACCTCCCGCAGT
ACACGTCTTTTGTAAGAACATCCAAAAGTTTCGAAGTCTTTAGGGTGTTT
TCGCGCAATATAGCAAAACAACTCGATGCATTTACACCGCTATTGAGTAA
TGCTGCCATTAGGGTGGTACCACTTTTCAAAAAACTCCAATCAAAAATTT
TGCTTGGCCGGGATTGAGAAACTTGGTCCAGGGTATATAAAGGTCAGTGC
TAGGATCCACATGATCCAGATGCAAGCTCAAACGTCAATTATATGATTTA
TAGCAGGAATTTGTCCTGAATTGTATGAAATATACCCAAAACCTTTTGAT
GCTAATAAATTGCGATTATGTAAAACTATCCGACGATCCCTGCCATCATT
CGTTCCCACTCTTCTACTAACGATAGACCTATTTTATAAGTTACTTCATG
AACATCACTTACCTCGTATTTGAACTATTTCCATGGTGATTAATTCCACG
AGCGGATTTTATTAAAACTGTTTCCTATTCATAAAATAATCATTTAATGT
CTCAAGAGACATAATCACCATGGTAATTGCTAGAATACGAGATAAGTGAT
TTCATGACGTAATTGCCACCGCAGGAAGCCTAAAGCTTCCGAGGATGGCA
TTCATAGCTTCACTCGTGAGGGAAAGTTGGGAAAACATCTCATAATTTTG
CGCGCGCGTTTCAGTATTTTAGTTCCGCTTAGCGGAACATTATCAATTAA
CGGTTATTTGATTTCCCGGAATGAAGAGCGATAAGCCGTGTTTTACAGGA
TAGCTCTTTTTTAGCTTGCGCGGCGGACGTTTGTTTCTTCCTATCGTGTC
GGAGCTTTCAAACAATGTCAATTGAATTATCTGGTATTTCTTCTATTGAC
TATGTTTCAAACGATCAGCCGATGGCTCTGGCTTTAGGTATAAGGTAATG
TCAGCGATAAAAAAGGAAAGTTGGTGGACCTGATGTGATGGTGGCAGACA
TCTTGAATTTCTCCCTGTTTCTTTAAATCTGTTTTATTCCAGTTATTAGC
ACAGTCCAGTAGTCCAATCGCACTACTTTTCTATAAACCCAACAATCCAG
TGTGAGTTTGCTGAAAGGAAAACTAAACAATTTGAATCCTTTTTAGACAT
TGAGATTGATTTATATTTTCCAGCGAAACAGAACACAGACTGACAGAACA
ACAGTCTGACAGTTATTTATATAGTTTTTTCCATCATCGTTCTAACACTA
TTGATACAGAACAGCACACAGCTGACAATTAAAAGAATTTTTGAAACTGA
ACTAAAGTATAAAACAAGGCGCCCTATAAAAGGGAAATTCCATAAAGGAA
AGTTTGCATTTTGCAAAAATCTATATATACAGTAGTTGACACTCTCTAAT
TCAAATTTCAAGGGATTCTCATCGAATACCACAGCATATTGAATATTGAG
AAAGTCTCCCAAATCCCTAAAGTAAATATTGAATTATAGAGTAACACGGG
AAGAAGAAGGCGAAGCGAAGGTTGATTATTGCGATTGGTTTTTGAACGTC
GAATCAGTACAATAACCGAAGATCTTGCTGAAAATTTATATAAGTTTTTT
GGAAGAAATCTTTGATATTTGCAATATTTGAGGAGTCAAATTTTGAGTTT
CTAATTTGAACGCAACAAAATCGAACATTTGAATTTCAAAATATCTGGCA
TTTTTTTTGTTACTAGAAATCAAATAAGAGAGTGGTTTTTCAAAACCTTT
AAAGTGACTTCAAATTTTTATCCAAAACGGGCTTATCAAATAGTAGAACG
TCAAATTAAAGTCTATTCACGATAAGTGTGCACTCTTTTTTCTTTTACTT
ATAACTTTTGAAGGAATTCTTCAATCTTTATAAATTTGGCATCATTGGAA
AGATATTAGTGAGTGGAACAATTTGAAATAAAAAAAGCTTTAAACAGATC
ATAAAAATGAAGATGAAAATGAAGAAGAAAAAAATGAAGATCTTGTAGAA
AAGTGCTATAGCTATCATTTTCACTGAAGTGAATCCTTAATCATCGAACG
TCATTACTGTGAAAAAAATTCTCAAAAATAATCATTCAGTCAAAAGATAT
CAAACAAAGTTATAAGCTGATTGACGTCTAAAAACGCTGTTTTCTGCAGT
TTTTTGCTGTTTTTTGGGGTCAATCACTCATTAACTTTGTATCATAACTT
TATATTGAATAAATATTTTAATGAAATTTCTTCACAGTGATGATCTCCTA
AGATCAAGGAATCTCTCTAGTGAAAATGAAAGTTATAGCACTTTTCTACA
AGATCTTCATTTTTTTCTTCTTCATTTTCATCTTCATTTTTATGATCTTT
TTAAGGTTTTTTTTATTTCAAATTATTCCACTCACAAATATCTTTCCAAT
GATACCAAATTTAAAAAGAATTAAGAATTCCTTCAAAAGTTATAAGTAAA
AGAAAAAAGAGTGCACACTTATCGTGAATAGACTTTAGACAGTGTCAACT
GTAATTACATTTTTTGCTTTTTGCTCCTAAAATAATTTGAAGATTTTTCA
CAGTATGGCAGAGGAAGACTTTGCGATTAATCTAGACACTGCATTGAATG
TTGCACATTTCCGAAATTCAAGCAGGACAACTGGCAGTCGTACCTATTCT
TGCGCTGTTGATTGCTTTCTTGAAATATGTTACCGCTTGCTTCTTCCAGA
AATGAAAGCTAAAGTATCATATGAAAAATCAAGTGATTTTTTTAAGCTGC
TTCAATTAAGTGGATCAATGGAAATTTCACTTGAAGATTACGATATGAAA
AGTAATGCTTTTCGACTGCTGGATGAAATTAGGGAACCGGTATGGTCTAA
GATTATTGAAAATTGTGGTACCTTTGTGAGAAGAAATAGCGACGCAGAGT
TTCAAGAGATTTTTGGAAGTAATATTTTCAAAGAATTATCAGAAGAAGAG
AGACATGTTTTTGAAACAAGTTTTGTAATTCAGGGTACTTGTAATAGTTG
TGGTAGTGAGAAGGAACAAAGAGAAACGGGTAGCATTGTCAGTCTTCTTT
CGCATTTTTTATATCCAGAGATTTTAGTTGATGCAAGTTTGTGGCCAAAC
TGTGTATCAAATTCTCTTAATCCAAGCTCAGAAATTAATTGTGATTCTTG
CTCTGTCAACATACCAGCACAGATTCAAGTTGTCAATTTGCCTATTTTTC
TTCTTATAGAACTCTGTACAACAGTATGTATAAACAATTGTAGATTTTTT
GAGGAGATTATAGTAAAAGAAAATAGCTACACATTACATGCCATTGTAAG
GAATTGTGGTGCCCATTTTGCATGTGGTATATTTATTGAGAATAAATGGA
TTTACATTGATGATTTAAATCCTGAAAAAATTTGTTTTCAAAACATTAAT
GAAATGTTTTCTGAAAACAAAGGAGGTTGGTTTTTTGCCTTTTATAGAAA
ATCTGATTCTGAAAAAATTGACTTTGTTATAGATACTACTAACCCTCTTA
ACACAGAATTGTCTATCAATAATGAAGAAAATGAGATCAAAAAAACATAT
CCTAATCGAAAGAGAAATCCAATAAACTATGAAGGTCTTTGCAGTACAAG
CAACAAAAAAAAGTAAATTTGATGATTTATTTGAGAAAATCAACCAAAAG
GTTAAAATTTTGAAACGAAAGGAAGAAAATAAAAAATTTTACGACTCGCA
TTCTGTGAAAATAAAAGCAAATTATGACCATGAAAAGCGAATAGCTCATT
ACAACCCTGAAAAGCGAAAGCTAGTGTATGATTCTAATAAGCGAAAAGAA
CGATACAATCCAAAAGAGCGAAAAGAAAGATACAATCCAAAACAACGAAA
AGAAATGTACAATTTAAACAAGCAAAAATTAAATTCACAGTCTGAAGAAA
AGAAAGTCAACTACAATATATGTAGTGAAAATATGAAAAAATTTCAGCAG
TCAATGAAGTTTATTATGGTTCAATGTCAAACATGTTTTGAAACTTGGCC
TATGAAAAGCACGTTAAAGTCAGTTTGTAATTGCCACCGCAGGAAGCCTA
AAGCTTCCGAGGATGGCATTCATAGCTTCACGCATAAGGAAGTTGGGCAA
ACATCTCATAATTTTGCGCGCGTTTTTCAGTATTTTAGTTCCGGTTAAAT
GGTGTACCGGTAACATTCTTAGCTTGACTGTATTTCTATTGTTTTATCAT
CATTAAAAACACTTTTCCAGATTTGTTTTGATCTGATTACCCATTTTCAA
AGCTCTCTATGTCTTTTTTTATTACCTCAGGGACTCAAATTAAGGGAAAT
TCCTTTTTTGTTACGAAATTCCCTATTTAAACCACAAGTAGTTATTAACC
GCTCAGAGAAAGGCAAATTAGAAATTGTCATATCCTTTCAAAAGTTTGTC
GTTTGACAATTACAGTCAAATGGCAGTACAGTACAGTAGCGTTTAGTATG
ATATCAATTTTGCTTCAGATGAGATGCCATTCTAACAGAAGTAACGGCTA
TCAGTAACATTTCTTTCCAAATTCAACAACTTATTTGATCGTTCTTCTGC
GGTGGCACTTTAATGAAAATTATGGCTAGTTTATGAAAAGGTCTATCTAT
TATCTCTGGCTCGAGCTTGCAACAAAATTCAAACCTTGTCCAAATAAATC
TCATTACTTTCCTAGCGGGTACTTCATTGTGTTATATGGAGCGCAAAGAA
AATGGTCTGGAGCTCCGTGGCTGCTTACCACACCCTGAAGCACCAATCCA
AGTGAAGTGTAACCAAACAGAAAATGGTGTGTTTGCATGTTGTTGTCGGG
AATCGTTGTGCAACACGTTAGAGTTCCGTAGTGATTGCTATGAGAGATTC
AATGCAACTGACCCGTATGATACAACGACAACAACAACAACGACAACTAC
AACGACTACAACCACGACAACTTCGACGACCACGACAACTACAGGTTAGA
ATTTTTTGCAAAGTATACCCCTCTCAAAAATCGGTTTTGTTTTCAACCTC
AGCTTATCATTGGCTTTTCCAACACTCGCCATATAACTTTTCATGATGCC
TATCAGGCACTTAAAGCTTGGGTTGCCTTTTGATTCTGATAGCTTTGCCA
AAAGTAAATCCATTATTCGATAAGTATATTCAAAAGGCATTTCCCATATC
CTTCGGCTGCGAAATTGAGTTTTTTGCTTTGAGTATGATTTTTCAGAGGA
CCTTTCCAGGTCTTTTACACCGTTGTAGACTTTCGGTAATGAAACGGGGG
TGTGTTTACATATTCTAAGAGAAAAATCATTTGCAATTTAGATCCATCAA
CTACGACGAGTACTACCACAACAACAAACGCTCCGTCCACAACAACACCT
AGCAAAAGCTCTGTCTTGATGTCATCTTGCTATTTGGTCATGATGCCACT
TATTTTGGGTGTTTTTACTCTGTATTGA Coding sequence (CDS) from alignment at sc0000084_pilon:1072663..1078340- >XLOC_037191 ID=XLOC_037191|Name=XLOC_037191|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1248bp|location=Sequence derived from alignment at sc0000084_pilon:1072663..1078340- (Clytia hemisphaerica_ch_hm2_pilon)
ATAGAAAACGAATATTACTTGAAAAATTTGTTAAAAAACAAAATGGCTTC
CCTAACATTGAAAGAGAGTTCATTGACGATGACTTTATCTTTGACAATCC
TGTTCGGTATATTTGTTTCTTCTAATTTGACGGCAGCCGAAACATTTTCT
TGTCACCGTGGAAACTATGCTAATGGAACAGACAATGCTCAGCCAGACAA
AAACTGCAATAGAAAACGAATATTACTTGAAAAATTTGTTAAAAAACAAA
ATGGCTTCCCTAACATTGAAAGAGAGTTCATTGACGATGACTTTATCTTT
GACAATCCTGTTCGGTATATTTGTTTCTTCTAATTTGACGGCAGCCGAAA
CATTTTCTTGTCACCGTGGAAACTATGCTAATGGAACAGACAATGCTCAG
CCAGACAAAAACTGCACGGGTACTTCATTGTGTTATATGGAGCGCAAAGA
AAATGGTCTGGAGCTCCGTGGCTGCTTACCACACCCTGAAGCACCAATCC
AAGTGAAGTGTAACCAAACAGAAAATGGTGTGTTTGCATGTTGTTGTCGG
GAATCGTTGTGCAACACGTTAGAGTTCCGTAGTGATTGCTATGAGAGATT
CAATGCAACTGACCCGTATGATACAACGACAACAACAACAACGACAACTA
CAACGACTACAACCACGACAACTTCGACGACCACGACAACTACAGCGGGT
ACTTCATTGTGTTATATGGAGCGCAAAGAAAATGGTCTGGAGCTCCGTGG
CTGCTTACCACACCCTGAAGCACCAATCCAAGTGAAGTGTAACCAAACAG
AAAATGGTGTGTTTGCATGTTGTTGTCGGGAATCGTTGTGCAACACGTTA
GAGTTCCGTAGTGATTGCTATGAGAGATTCAATGCAACTGACCCGTATGA
TACAACGACAACAACAACAACGACAACTACAACGACTACAACCACGACAA
CTTCGACGACCACGACAACTACAGATCCATCAACTACGACGAGTACTACC
ACAACAACAAACGCTCCGTCCACAACAACACCTAGCAAAAGCTCTGTCTT
GATGTCATCTTGCTATTTGGTCATGATGCCACTTATTTTGGGTGTTTTTA
CTCTGTATTGAATCCATCAACTACGACGAGTACTACCACAACAACAAACG
CTCCGTCCACAACAACACCTAGCAAAAGCTCTGTCTTGATGTCATCTTGC
TATTTGGTCATGATGCCACTTATTTTGGGTGTTTTTACTCTGTATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000084_pilon | genome | sc0000084_pilon:1072663..1078340 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 499-627:130 |
| Aaloc | 490-495:136 |
| Aaloc | 211-486:762 |
| Aaloc | 1-207:5679 |
|
