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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000338_pilon:314593..316764- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036713 ID=XLOC_036713|Name=XLOC_036713|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2172bp|location=Sequence derived from alignment at sc0000338_pilon:314593..316764- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTTTTTTGAACATACAAACATTACAACTGGTCAAGGATGAAGATAT
ATCTTGCAATGTTTACATCGTCAAAAAGGGTATGTTTCAATCCATTCAAT
ACTACAAATTGCCAGTTTTACAAAGAAAATTACTACAGATATTTTCCTTT
TACCTTCTTTGTAAGGGGATAAAGTTAAGGGGAAATGCACTCAATAAAGT
GCAGCTACATACTTGTGTAATATTTTTTTCAAAAAAGGCTTTTTTAGTAT
ATAGATTGATTCCATGTGACGTCATTTTCACCCACAATTGGCCATTTTTC
TTAGGAATGATAATTGATAGAAAGAATATGTTAAAGGATGATTTAGTAAC
ACCTTGATAGCTCACAATAATCAAATATATGTTATTTCAGGTTGGACACT
GCACTTTTTACTAGATCCTGTGCTCGATTCAAAAGTTACCACATTTTACT
GCAATCATCCAGTATCTGCTTCTGAAGAGTACAATCATGAAACATTCCAT
AATTACCAATGGACAAGTCATCATAATGACATCTTATTCCCGGACAGTTA
TGCTCAAGTAGAAATCAAAAGAGCCGGTGTTTTCAAATTTTATTTAGAAT
CTGAAAACAAGGAAAGATGCTGTAATGGATTCTTTATTGTCCAGCCTGAT
TTGTATTTTGATTCTGGCAATGTTATAGATATCCAAAGTGTCACCATGCA
AACTGTTCTTACCAAATGCCTTGGTAAGTTTGCTGGTTGGAAAGGTAGAC
TCCAAGTAGCACGAGAATGTAATTACAATACAATTCATTTCACACCTATT
CAAGAACTCGGTGAATCAAATTCCAGTTATTCTATCCGTGATCACCACAG
ATTGGATCCACGGTACGGAGATGATTTCACCGAATCCAATTTGGAAGCTT
TTGTCTTGAATCTACATAAATCGTGGAATATGTTTTCAATAGGTGAGTCT
ATCTGATGGTTTGTGTGTATTACTGTGTATTTTTGTATTGTAATAATCGT
AACTTTAAATTTAGCAAAAAATTCAATAAATATATAAAAAAAACTTACAA
AAACAAAAGAAATTTGATCCGTTGATTATTTACAGATGTGCAGATTTTGA
GAGAATTCCACAAAAAAAATCAAGTCCCAATGCAATGGAATTTTGTTGAA
GGGAACATTATCCCCGAAATATTTTCATGCCATGCATTACAAATCTACTT
ATGATTCTATTTACTCAAACCCTAAGATAGTATCCACTGGAAGCTGTATT
TTTTAGTTTCTAAACTTACATTTTCTCCGTTTTATAGTTGATGTAGTTTG
GAATCATGTTGCCAACGATTGCAAATGGATTACAGAGCATCCAGAAGCAT
CCTACAATCTGGTGAACACACCTCATTTGCGACCAGCCTTTCTGGTAGAT
CGCTTATTATGGTATTTCAACAAAGAGATTATTGACAATCAGTGGAAGGG
TGAAGGATTACCCAATTTCATTTCAGAACAATCTCATTTGGAATCACTGG
AAAAGATTTTAAGGTAAGTGAGGCCGTTTGTTTTGGCTAGGTAAATATAC
TCTGACTGTTTTTAACACTTTTTAATTTATAAAGATTTTAAGTTGGTGCT
GGAAAAAAAAAACGGACTGAATTTTCTTTGTGAAGTAAAATGTGAATCTC
AAATTTATATATCGAAAGGGAAACACTTTGCTTTGAGCTTCTAGTTTCAG
GGATTTTTCTAAGCACAGCACAAGCTGGGGCCGTTTTCGTAAACTTAGAT
TGAATTTGTAATGCCTGAAAGGGAACTTGTTCATCAAAGCTGTACATTGA
TGAGGGCAAAGCTCCCAAAAACTCACGAATATGTAGATAATAAGTAGTTA
TTGTTGCTCATAAACAACAAAAAAGGTTAATTTCGCTAGAAAAAATCTCA
TTTATATATTTTAGATTGAGTTTCAAAAACCCAATCTTAGATATTAGTAT
TTTGGCCGGTATACGGACATAAAAAAGTGGTTGGAAGAATCCCTGTTTTA
AGACTGACTGTGGAATGTGAAATTTTTTTTGTATCTTTGGTTGGTCAGGC
GATCAGATCGAATTCTATTTCTGTCAATTCCTTCTGATTGAATGTATTTT
TTATATTTTCACTTCAGGAAGAAACTATTGGATTTACGTCTTGAAGAATT
CTACATGGTTGACATTAAAGAA Coding sequence (CDS) from alignment at sc0000338_pilon:314593..316764- >XLOC_036713 ID=XLOC_036713|Name=XLOC_036713|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1824bp|location=Sequence derived from alignment at sc0000338_pilon:314593..316764- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTTTTTTGAACATACAAACATTACAACTGGTCAAGGATGAAGATAT
ATCTTGCAATGTTTACATCGTCAAAAAGGATGGGTTTTTTGAACATACAA
ACATTACAACTGGTCAAGGATGAAGATATATCTTGCAATGTTTACATCGT
CAAAAAGGGTTGGACACTGCACTTTTTACTAGATCCTGTGCTCGATTCAA
AAGTTACCACATTTTACTGCAATCATCCAGTATCTGCTTCTGAAGAGTAC
AATCATGAAACATTCCATAATTACCAATGGACAAGTCATCATAATGACAT
CTTATTCCCGGACAGTTATGCTCAAGTAGAAATCAAAAGAGCCGGTGTTT
TCAAATTTTATTTAGAATCTGAAAACAAGGAAAGATGCTGTAATGGATTC
TTTATTGTCCAGCCTGATTTGTATTTTGATTCTGGCAATGTTATAGATAT
CCAAAGTGTCACCATGCAAACTGTTCTTACCAAATGCCTTGGTAAGTTTG
CTGGTTGGAAAGGTAGACTCCAAGTAGCACGAGAATGTAATTACAATACA
ATTCATTTCACACCTATTCAAGAACTCGGTGAATCAAATTCCAGTTATTC
TATCCGTGATCACCACAGATTGGATCCACGGTACGGAGATGATTTCACCG
AATCCAATTTGGAAGCTTTTGTCTTGAATCTACATAAATCGTGGAATATG
TTTTCAATAGGTTGGACACTGCACTTTTTACTAGATCCTGTGCTCGATTC
AAAAGTTACCACATTTTACTGCAATCATCCAGTATCTGCTTCTGAAGAGT
ACAATCATGAAACATTCCATAATTACCAATGGACAAGTCATCATAATGAC
ATCTTATTCCCGGACAGTTATGCTCAAGTAGAAATCAAAAGAGCCGGTGT
TTTCAAATTTTATTTAGAATCTGAAAACAAGGAAAGATGCTGTAATGGAT
TCTTTATTGTCCAGCCTGATTTGTATTTTGATTCTGGCAATGTTATAGAT
ATCCAAAGTGTCACCATGCAAACTGTTCTTACCAAATGCCTTGGTAAGTT
TGCTGGTTGGAAAGGTAGACTCCAAGTAGCACGAGAATGTAATTACAATA
CAATTCATTTCACACCTATTCAAGAACTCGGTGAATCAAATTCCAGTTAT
TCTATCCGTGATCACCACAGATTGGATCCACGGTACGGAGATGATTTCAC
CGAATCCAATTTGGAAGCTTTTGTCTTGAATCTACATAAATCGTGGAATA
TGTTTTCAATAGTTGATGTAGTTTGGAATCATGTTGCCAACGATTGCAAA
TGGATTACAGAGCATCCAGAAGCATCCTACAATCTGGTGAACACACCTCA
TTTGCGACCAGCCTTTCTGGTAGATCGCTTATTATGGTATTTCAACAAAG
AGATTATTGACAATCAGTGGAAGGGTGAAGGATTACCCAATTTCATTTCA
GAACAATCTCATTTGGAATCACTGGAAAAGATTTTAAGTTGATGTAGTTT
GGAATCATGTTGCCAACGATTGCAAATGGATTACAGAGCATCCAGAAGCA
TCCTACAATCTGGTGAACACACCTCATTTGCGACCAGCCTTTCTGGTAGA
TCGCTTATTATGGTATTTCAACAAAGAGATTATTGACAATCAGTGGAAGG
GTGAAGGATTACCCAATTTCATTTCAGAACAATCTCATTTGGAATCACTG
GAAAAGATTTTAAGGAAGAAACTATTGGATTTACGTCTTGAAGAATTCTA
CATGGTTGACATTAAAGAAGAAGAAACTATTGGATTTACGTCTTGAAGAA
TTCTACATGGTTGACATTAAAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000338_pilon | genome | sc0000338_pilon:314593..316764 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 859-912:55 |
| Aaloc | 634-855:884 |
| Aaloc | 82-630:1781 |
| Aaloc | 1-78:2173 |
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