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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000126_pilon:333048..342075+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036699 ID=XLOC_036699|Name=XLOC_036699|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9028bp|location=Sequence derived from alignment at sc0000126_pilon:333048..342075+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACTCCGTGGAGGGGACGGAGAGGAGGAGACCACCATTATAACCAC
TACAACCACTACTGACACCCAACTAAAGAAATATCGACAATCAAGAGAAG
TGAGCGAAAAAGAGGCCATTGAGAAAAGCACGACGCGTAAAGTGATCCGA
TTGGACGAGAACGGAAATGAAGAAGTGACGGTTAGAGAAAGACACCTCAT
CAATACTGATGAGGAACAAGTCAAACGGGAGGTCTCACGAAAATCCAAAA
ATTATGAGGTACTAACATTTTTTGTGACCGATCTATGTTTTCCATAGGTA
gccagtctgttcctctaaagaatacTGCATTgcaacacgcatgcgtaatt
tgtcgttatTTCCgtgataaagaaaaaagaatgaattCGTAGGGGTGGAC
TAACTAACCGGGTCGGAGTTGTGGACAGCGAAAATTGTCGTtcattatga
aatttgtcgttctttttgtctatttttagtaaatgtaggattctttagat
aaacccctcAGCACCCTTTATTCTGAAATGGGTTGCACTTTGCTTGCTTG
TTGATTTTCTCACTTTGTCAGCATCCTAAGCATTCGCGTTTTGAAACCTT
TCGGTTGCATACTTGTTGCTACACAACTTGTAATGGTTTCGTGGCTACAA
AGCATTTATACACCCATTTTTCATATAGAGGATAAAGTATTTGAAAAGGG
TTCaaaaagataaatgaaaaataagaacacacAAATCACGGATCAAAATA
CTTTGATAGGCATAAAATTCTTCAATTTAGCCGAGAGAATAAAAACAGGA
TCAATGCAATTTGAGGCccacaaaaataagaacagctgaacctcatgttc
ttataataaagcGTGTACAGTGTACCCATGATACATATTGAACAACTACA
AAACCTTATTTTCAACTCGTTTATTTTTTGTGTCTGCAAGCGATGATTTT
CGTATGATGAGCTTGAGACAAGCTCCATTTTATATATATGGTGCACAAGC
AGCGTGGTGAGTCGACTAAAATTCTGGCAAATTGGGGAGACAATTTTCAG
GTTTTCATTTGGCACCTCCAATGAAAAGTATATATCTTTGTAAAAATTAC
ATGAGCGAGGCGAGCACGAGAATTTTGGgatattttttctcattttggcC
GAGAACTGCCATACCTAAGGTTAAAAGAGCAAAGGGGCGCCGATATTGGT
AATCTGAGGCGTCATTTTGcgccctttgtatttcggcgccCCAACAAAAA
GGCCGCTGgggccattgagtttcaagcccgaagggctagaggcgagactc
ctggatggaaaatgaaaccacttatttcccatccagaacgcccgcgcgta
gtttttacacaaacgccgaattgaaactaaaatctatcgctagatttcaa
aaaatgtagtcctccaaaacaaagaatCCGTCGTCAtaattacggcgcgt
tctatgcccGTTTTGAATgagaaataagtagcttcaatttctcttgcctg
agaagggttaaagtttcgcctctagaccttcgggcttgaaactcaatgac
tGATGGTACACTTCAAACCAAATCAGAAGCACCGAGGGAATTCAGCTAGT
GACTTGTCACATCTGTCATTCTTTTGATAGCAATCATGTGATCAGAATGg
agtaatattttttcattatggTAAATTATACCACAAGATTATCCATCCGT
AATCACATTGCTTAACTTACGAATTAACATTGTATCATTTTCGAAGCCAT
ATTTGGTATGCTCCGTCATGTTATTACACGCCTGCATCAAGTTATCGCAA
AATCCGATTTATTTCTCTATATGTACCTTCTAATGCGATGATTCATTCCA
GATTACATATTTGTCTTTCAAAATCTCCAGAAACCAAAACGTATATCTAG
CATTCTTTTTGGCTAGTGTGGAAATCCAACTgtatatacacgctttttta
taaggaacacgtttataaggagcTTTAGCCTGAAAATGGTCCGAAAAACT
AAGGAAtagttaaggaactgctcaggctgagaataacaAAACAAGTTAAG
GAATGGAAAGTTAAACTTGAATTTGTACGCATTTATAAACGCCTAAACAA
AAAGATGGACAAAATATTGACGAAACAACATCCAATGAACGTCTTTTTCT
GTACTGTAGTCAGTCAAGTTACATACTTAGCAAATCCAATCTTAGCAGCT
AAGTAAATAAGGGACTTTGAAGCTGAATCTTTCTGGAAAAAttaggaact
ccaggctcggagcaaagttaaggttccttataaaagaCGTGTAACTTGAG
CCAAAGCCTCGATCCAAACCAGCTAATTAAGATTATTTAAGACATAACAA
ACATAACAAAATGGTCTTCTTGTAAGTCGAAGGTGAAGTGGAAATCAATT
TGCACAAATTAAAAGTTATGATACATCGTTTGGAATTTCAATCAGGAAGg
atgcaaaaaaattttatcgTTTACataaatttgtctttttatgGAGATCT
TCATTTATTGCCATCTTTATAAAGAAATATCCTCGgcatgtttcttattt
tatttaattgtttccTTTCTcgatacacgtcttttttataagaacaagct
atataagaacataaggctttgatggccaaaatactaagaacaagttaaca
acattttaaggctttaattaaaccaatttcttaggaaaatgaacaaaata
ttcaaaaaatggagaaaatatgaacatgctaagaacatttttaggcttta
aaacttaaaaagtttatcccaaggcttcaaaaattttggatgtttttata
gaggaaagaaaacgtgtatcttGTCATTAGAATTCCTTCGTCTTTAAATT
TTGGCAAGTTAGTTTTGTTGTTGAATTTTTCTGATTCTTCtaacatcttc
tttttcaacCTCTAAACTTTACAATTCAATTAATCTGGACATTTGACATA
ATGGGCGTGGCTCTTCCATAAGATGTCCTAGAAATAAAACTTTATGACGT
CAATTTCTTCGAATTTCTGAAACTCTGTCAACACCGACTCTTTTCTTTCt
gtaaccactgacctttacataccctggaccaagtttctcaatcccggtcA
AGCAATATCTTTGTTCggggttttttgaaaagtggtaccctaatggtggc
actactcaatagcggtgtaaatgcatcgagagcgctagatctactttccc
tcgaaaacttttgatgatgtgcgccgttagacgttaataatttttaacac
tgaaatggcttctttacggctaccaatttaaagaaaacttcgatcaaaga
tggcggatatatcttggtccagggatatacaAAGGTCAGTGCTTGTGACT
TCTCAACCAAAATAGTACCTCTCAATGAAGTGCGGTCTTAACTATCATGA
TAAAAGAATGCTGCAATAAATTTTGTATCGAAACGATAATTTGTCTAATG
TATAAGCGAATCAATTAGCAGAGAGATTAATCAACCTCTTATTGCTATTT
GATGAGTATAGACTAACCAAACGAAACCAAATATAATAATCCCTCCATTC
TAGTTCCTTCCACTATCACTTAAACATATTAGACGTCTGAAAGATCACCC
TTTAAAAGTCGACATGTCAATATTCAGCCCGTAATTCGATCAGGCCTATC
aaaaaaaTCATCGATCCTTCTTATGGTTTGATTATAAGAAGGCCTACCAG
AGAGAGGGGTTGAGTACAGACAGACAACATTTTCTAATTACCGCAGTAAA
CGGAAATATCAACTCTTCCTTGTTTTCATTTAATTGGTTGAGctgatgat
gatgaaagttattGTTTTCGTTTCTAGTATACATCTACagtgtgttttga
aagttggtgtattttgttgacattttgtttgtgttgtgtaaagaacgttt
tgttgtttcatatttgtCGAATTGACATTTTTCTCTTGTCATATGTTTGA
CACTGTTTTATTACAAACCATACTTAAAGACGATCGCTTCATTTATATTA
GAAAGTTTGGTCACTTTTTTGAGACGGAATCGGACTTGTTATACAACGTG
TTTCACTACACTTGACATCAGTTATCAAACCTATTTGGCGATCATCATCA
ATTCTAAAGATTCTTTTGGTGGAGGATCATCAAAACGTTGGCGatataaa
gatttgtttttatggAGTAAATATTTACCGTTCAAACAGACGTTTCATGA
TTTATATTATTTGATGGTTTTATACGTATCCAAGTGGAGGATTTGTAATT
GACActctcgctcgctctctctatctctctTCAATTTGACGTACAAAACT
TTCCTTCGCTCACGTATTCGTTTCTCACTTATTAGTTTTTGGTGTTTTGA
CTGGAATCGTCTGAATTCTTCTTGGCGTTATCCCGTGGAGGATAGAGTTT
TTACTGGAACTTTCGGACGTAGAATTGAATTGACTGTTTGTTCAACACTT
GTATACGTTTTGATGacacttttgaaaaattacatataGAAGTAAATCTA
TCCTATGTTAACATTGCAACCAAGTGTCGATTGGAAAGCTACCATTTTTA
TTGGTCGTTTATTAAGTCAACTTTAGTGGACGGGTTtgtgtgtgtgtgAC
TTTATAAAAAGTGttgtttgaaaaaagataatgtCATTGATCAAGATGAG
GTCCAAAGCATTCGAATCAACTTCTGGTGGCAAGGGGATTGTGGGTAATA
AAAGTGACAAAGCATTGCTTATCAATCAACCTATCTCTATGCGAATCAAG
TACTGGGTAAGGTGGTTCTTCTTTGACTGatgttttagaccatgttcgca
cgtgacagTTCCATTTCGCTCCAAAACGGAATGAAGCCGTGGTTCTAGTT
AAAAGTGACGGAAGACTTGTATGTAACCAAGAgacttcatttcgtttcgg
agcgaaacggaaccgtcacgtgcgaataTGGCctcagaccatgttcagac
gttacggtttcgtatcaCTCCGGCATGGCTTCCGTTACAGATtgagagtg
ttcatattggtttcggaacgttttggagcaagaaaacggagcagttccct
tccgatgaaaaaagtggaacgaaaacgtttcgatctgttttggaTTGTAA
CGCCTACTTTTTtaacgtttcgaattttgacgttcacacttgtttcggga
ccgtttcgtttcggaatgatacggaacagtaacgtctgaacatggtttCA
AGCTTGGTTCAATCAAAAACTCAATGTCTTTCTGGGGAGTGCACTGACCG
TATTGGAAGCTAATTTGAAAAGGTTTTACTGGGATAATCTTTCGTGATTG
AAAACGGAAATCACTCCAAATTATCACTACTTACTTGCCTAAAAAAGATA
TCCTTTGTCTCTTAGGAACTTCCTGAAAGCATTTTTGCATGTGTAAAGCT
CACAATTCTTCAGTTAGAAATCTTTATGATTGAAAAACGGAAATCACTCC
AAATTATCACTACTTACATGCCTAAAAACGGAAAAatgtgttatgtttta
ttttgattttggttaCACATCTCAAGGCTGTTTCATTTACatgcctaaaa
agatattctttGTTTCTTAGGAACTTTCTGAAAGCATTTTTTCATGTGCA
AAGCTCATAATTCTCCAGTTAGAAATCTTAAAAACGTACTCCATATAGAA
AGGAGTGTTGTAAGATGTTGTATATGATTTTATGATCTGCTTACACTTTA
AAGCTTCAAATTCTTTCTCGGAGCTAAAGCAGGTCTGTAAAATCTGTCTA
AGAGgtgtttttgtttatcttttctttatgaaaaatactctacacgtttt
ttttttataaaacgtgTACAtatcttttaagaaaaattccACAGCCAATA
GATTAAAATGTGACTTTTTATGGAAACAAATATGGTCgggttttcatttt
cttcattatgAACATTTGGATCAATTTTTGCCTGATATGCACCATCTTGT
CCTGCTTTTGTAAATTTCCAAAGTGTCAAAAATACTGCTTGAAAAAACTT
GCTTTTccgtgtgtgtgtgtgtgtgtataTAATATTGATATCGCTTTTTA
GGTTTATGCAACCTTATTGTAAAGCATCCGatttcttgatatgcgtaagt
caagattacgtcatttttcatatcagaaacacccaaaaacaccggaattt
atatttttagtaACACTCAGGTGTTTTCGGGTGTctccgataggaaaaat
gacgtaatctcgAATTACGCATTTTAAGAATTACTAAAGCCTTCAACTAA
GATTGCCATTAGAAATACCTGAAAAGTGGTATTTTTGGTATTGTCTAGTA
AAagttattttcttcaaaatcaatACACGGGCAACTTTGAGGCTGGTACC
CTGGAAATTCCTATAACAAACAGTAAATCCAAAATCGGGTGCGGGTTACT
TTTATTAAAAATGGACATCATAACATTACATTTTGaactaggcttctgct
cattcTCTGGctaaaagagtttcttatataggaagtatatctatagatgt
ctgcgattcagactaacttTCAACCTACATTTGTCGGAAAAATTTGTTAG
CAGTTTCTGCTTAGCTGACAAGACTCCTATTTTCGTACtgaaaataaaca
cttttttttaataacaacTTGGATGTTCCCATGACAACTTGTTACATTAA
ATCCGTTAGACacatcaaaacattgaaagcaAAATATTTCTCCTTGACAC
CCACATATCAGCTTGCAAATAAAGTACTTGAAACAGGCACATTCAAGCAC
TCTCTgaaagtacacgcttttttataagaaccaactatacaagaacataa
ggcttcggtggccaaaatgctaagaacaagttaagaaagttaagaacatt
ttaaagttttgcggggactcaaaaacactcgattctttaggaaaatgggt
caaaatggtcacaaaatggagaaaataagaaaatttcaagaacattctta
ggcttaaaacccagaaagttaagaacatctaaaggcttcaaaaaaacgtg
tacattgcATAAgtagatgtttttttataagcatacttttttggaaaaca
cGCTCAGTTATGCTTACCTTGTATTTTGGAATATCGAGCTCAAATTATGT
TTTGCTTATtcttctgaagaaaaaaatggttcgtttaaaatggaaaagaa
aaacgaaTTTTCCCAAGCACATAACCCATGACTTATGACCAAATGACCTC
AATGAAGCTCCCTGACATGCTTATgatataagtaagtaagtctgcgaccg
cagtgagaagcgacccgaaggctcctctttcgatagctatctacccgaag
gtaggggagggcgccactctttctccctggatttatccacttacccttga
tccttctcttaactgttgagcatcaagcagagccggatgctctaccactg
catcACGGTTCGCTCATGATATacttattttttcaccaaatccagGTGtc
aagtatgcttataaacgtgatgcttataaaaagaaaaatatcattgCTCA
AAATATGATCCTACGCTGAAAACTACTAAATAACTTCTTACTCCATAtca
tatacactttttttataagaacaaactatataagaacaagcttGACACCC
TTGACACCCACACATCAGCTTGCAAACAAAGTACTTGTGATAGGCACATT
CAAGCACTCTCttgaagtacacgtttttttataagaacaaactatacaag
aacataaggcttcgatggcaaaaaatgttaagaacaagttaagaaaaaaa
aattggacagtcttattaaaaaaacgtgtactcgaACTGAAGCCGATCTC
TATACATGTATGCCATACttctctccataactcgaataaatTGACGTTTC
GTGTTCGTGTTATGGAGAAGTCATAGTCTAACCCATTCGGTATCTAATAT
CAGACTATTAATTCATCCTCTGGATTCTTTGTTGAGATTTTTGGCAGTGC
ATCCTTTTATTACCTCCGTTTTATCAGATGACCTATGATTTCGAAGTCCA
AATTAGTTCAAATTAATAATAGtggttttctttttcacttgTTTCAGTCT
TTGCCAGAAGAAGATGAAACACCCTCCAAcgataaaaacaacaacaaacg
aAACGCTGAAATCACCATCGAGCCTCAAGAAAAAACCATTGAACAACGCC
GACAAGAACGTGCCGAACGTCGTGCCAGTAGACGGAAAGAATCTGACACA
CCGCCGTCAAGCGTTGAAAAGACGGTGACAGTTCAAACGTCCATTTCTAC
CACGGATAATGGAGTCGAAAATGTCAAGACCACGCGCACAAGCCGTTTCT
CGAGAGGCTCAACGAAGGAGAGTGAAAAAGTTGAACAGAAAACGGTGGAA
GTCAAAATGGAAGCTAAACCTGTGAAGATGgaagctaaagaaatcaaagt
ggaaacaaaagttgaagcaaaacctgaagaattgaaaaaagaggaaccta
aaaaagttattgaggaaaaaattgaagtcaaggaggaaaaaactgttgaa
agtgcgaaagttgaGGAACCAGCGAAAGTTGAGGAAACGAGGAGAAGTTC
GAAAGTGGAAGAAGCTCCTAAAAATGAAGTTAAAGATAAATTATcatctt
taaagaaaaatcaatttgaaagtAACAAAGGTAATTCAAGGAACAGGCCA
GGCTCCATGGTAgacttcaaatcaaaatttgaaaacaaatccaATACGAA
CGCAGTCAACAAAAGACCCGTCTCTATGAACATTAAATCGAAATTCGAAC
AAGACACAAAACCTGCTAATAAATTCGAACTTCGTAAAACCACATCCGTT
CCTTTGAAACCATCAGCGTTGAAAACCTCTACCAATAAAGTTGAATCCGA
TAAGAATGGAGTACACACAGAGAAAACCGTCACCAAGACAGATGCAACTA
TCGGAGAAGGAGCCTCCAAGAAAGAAGTCAAAGAGATCAAGTCAGTGGAA
ACCAAAGACACGGCTACAACCCATGCTGAAAAAACCACCACCATCACAGA
AACCAAAACTAAAGGAGGAAGCACTACT Coding sequence (CDS) from alignment at sc0000126_pilon:333048..342075+ >XLOC_036699 ID=XLOC_036699|Name=XLOC_036699|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2478bp|location=Sequence derived from alignment at sc0000126_pilon:333048..342075+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCACTCCGTGGAGGGGACGGAGAGGAGGAGACCACCATTATAACCAC
TACAACCACTACTGACACCCAACTAAAGAAATATCGACAATCAAGAGAAG
TGAGCGAAAAAGAGGCCATTGAGAAAAGCACGACGCGTAAAGTGATCCGA
TTGGACGAGAACGGAAATGAAGAAGTGACGGTTAGAGAAAGACACCTCAT
CAATACTGATGAGGAACAAGTCAAACGGGAGGTCTCACGAAAATCCAAAA
ATTATGAGATGGCACTCCGTGGAGGGGACGGAGAGGAGGAGACCACCATT
ATAACCACTACAACCACTACTGACACCCAACTAAAGAAATATCGACAATC
AAGAGAAGTGAGCGAAAAAGAGGCCATTGAGAAAAGCACGACGCGTAAAG
TGATCCGATTGGACGAGAACGGAAATGAAGAAGTGACGGTTAGAGAAAGA
CACCTCATCAATACTGATGAGGAACAAGTCAAACGGGAGGTCTCACGAAA
ATCCAAAAATTATGAGTCTTTGCCAGAAGAAGATGAAACACCCTCCAAcg
ataaaaacaacaacaaacgaAACGCTGAAATCACCATCGAGCCTCAAGAA
AAAACCATTGAACAACGCCGACAAGAACGTGCCGAACGTCGTGCCAGTAG
ACGGAAAGAATCTGACACACCGCCGTCAAGCGTTGAAAAGACGGTGACAG
TTCAAACGTCCATTTCTACCACGGATAATGGAGTCGAAAATGTCAAGACC
ACGCGCACAAGCCGTTTCTCGAGAGGCTCAACGAAGGAGAGTGAAAAAGT
TGAACAGAAAACGGTGGAAGTCAAAATGGAAGCTAAACCTGTGAAGATGg
aagctaaagaaatcaaagtggaaacaaaagttgaagcaaaacctgaagaa
ttgaaaaaagaggaacctaaaaaagttattgaggaaaaaattgaagtcaa
ggaggaaaaaactgttgaaagtgcgaaagttgaGGAACCAGCGAAAGTTG
AGGAAACGAGGAGAAGTTCGAAAGTGGAAGAAGCTCCTAAAAATGAAGTT
AAAGATAAATTATcatctttaaagaaaaatcaatttgaaagtAACAAAGG
TAATTCAAGGAACAGGCCAGGCTCCATGGTAgacttcaaatcaaaatttg
aaaacaaatccaATACGAACGCAGTCAACAAAAGACCCGTCTCTATGAAC
ATTAAATCGAAATTCGAACAAGACACAAAACCTGCTAATAAATTCGAACT
TCGTAAAACCACATCCGTTCCTTTGAAACCATCAGCGTTGAAAACCTCTA
CCAATAAAGTTGAATCCGATAAGAATGGAGTACACACAGAGAAAACCGTC
ACCAAGACAGATGCAACTATCGGAGAAGGAGCCTCCAAGAAAGAAGTCAA
AGAGATCAAGTCAGTGGAAACCAAAGACACGGCTACAACCCATGCTGAAA
AAACCACCACCATCACAGAAACCAAAACTAAAGGAGGAAGCACTACTTCT
TTGCCAGAAGAAGATGAAACACCCTCCAAcgataaaaacaacaacaaacg
aAACGCTGAAATCACCATCGAGCCTCAAGAAAAAACCATTGAACAACGCC
GACAAGAACGTGCCGAACGTCGTGCCAGTAGACGGAAAGAATCTGACACA
CCGCCGTCAAGCGTTGAAAAGACGGTGACAGTTCAAACGTCCATTTCTAC
CACGGATAATGGAGTCGAAAATGTCAAGACCACGCGCACAAGCCGTTTCT
CGAGAGGCTCAACGAAGGAGAGTGAAAAAGTTGAACAGAAAACGGTGGAA
GTCAAAATGGAAGCTAAACCTGTGAAGATGgaagctaaagaaatcaaagt
ggaaacaaaagttgaagcaaaacctgaagaattgaaaaaagaggaaccta
aaaaagttattgaggaaaaaattgaagtcaaggaggaaaaaactgttgaa
agtgcgaaagttgaGGAACCAGCGAAAGTTGAGGAAACGAGGAGAAGTTC
GAAAGTGGAAGAAGCTCCTAAAAATGAAGTTAAAGATAAATTATcatctt
taaagaaaaatcaatttgaaagtAACAAAGGTAATTCAAGGAACAGGCCA
GGCTCCATGGTAgacttcaaatcaaaatttgaaaacaaatccaATACGAA
CGCAGTCAACAAAAGACCCGTCTCTATGAACATTAAATCGAAATTCGAAC
AAGACACAAAACCTGCTAATAAATTCGAACTTCGTAAAACCACATCCGTT
CCTTTGAAACCATCAGCGTTGAAAACCTCTACCAATAAAGTTGAATCCGA
TAAGAATGGAGTACACACAGAGAAAACCGTCACCAAGACAGATGCAACTA
TCGGAGAAGGAGCCTCCAAGAAAGAAGTCAAAGAGATCAAGTCAGTGGAA
ACCAAAGACACGGCTACAACCCATGCTGAAAAAACCACCACCATCACAGA
AACCAAAACTAAAGGAGGAAGCACTACT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000126_pilon | genome | sc0000126_pilon:333048..342075 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 259-1239:8048 |
| Aaloc | 1-258:1 |
|
