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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000126_pilon:99191..104768+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036693 ID=XLOC_036693|Name=XLOC_036693|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5578bp|location=Sequence derived from alignment at sc0000126_pilon:99191..104768+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAATTGatgttaaagatattcaaatCATTAATAAAGGTAATTACAG
TTTTGTTAATTTGGAAATGCTAATTAATGTTAATTAATTGAACATTACAG
TCGTCACCATTGAGTTACCAAACCGGAAgagctagaggcgagactccttg
atgggaaatgaaaccacttatttcccatccagaacgcccgcgcgaaGTCT
Ttgcacaaacgccggattgaaactaaaatctatcgctagatttgaaaaaa
ttatagtcatccaaaacaaaggaaccactagatacaatccgtcgtcatga
ttacggcgcgttctatgcgcgttttgaatgggaaataagtagcttcaatt
tctcttgcttgagaagggttaaagtttcgcctttAGCCCTTTGGGTTCGA
AACTCAATGGTAGTCCCCTTCTTCAGACCTGTAACGTTTTTGCAGCGTTT
CCTTTGCGTAGTCACTTGAGTATCGTTACTACATAGCATCACCAACATTC
AGCCTTGGtcaggcccggtggaagcgAGGAGACTGGgaagacttcagcct
ccccacttgtgaacaaatgagatttttttctcaaactcctagcgaatttt
atctcattttgagccttcagcctccccacttttacggttgctCCGCCTGA
CCTGTTGGTGATAGTAGCACAACAGTATATCATTCagctacggtgcacaa
ggttgtgggttcgaccACCCATTCGGGTTATACCAAACATTTAGTAAAGA
TGATACTCTGATGCTTGAGGCTCccccagcggttttcgtgattgcgtgat
tggCATTTTTCCGTGATTGCATGATCAGACGAACCAGcgtgatcaacgtg
atcgtgatagaaagaaaatttaactcgtgataacgtgatttgggaatttt
ttgcgtgattgcatggctttgaaaggtgactgAAGGAAGGTCTCATAATT
CTATGCTTGATGCTAAGCAACTAAAGAGatggatcaagggtaagtggtgA
AATCCAGGGAAAAGAGTGGCACCCTAAGCTACCTTCAGttagacagctag
agaaaagggagccttataaacatccaatattttttatacCTTCGAATGTT
CTTGACTGTTTTACTTTTAAGCCTATGAATGTTcgtaagatgttcttatt
ttcaccgttttgcGAGTACTTTTGTGTggtttcctaagaaatttggtccg
ctaagccttaaatgttcttagcttgttcttaatattttggccatcggcCA
TATATTGTtttatactttgttcttataaaaacggtGTATTTCATTTGGTT
GTCCGTAAAAACTTAAttccttttttcaaaagctaGCCCAGCTGTCACAc
cacgttgtttcaatgttcatacAACGTTATATGgccgttgtgaacgttag
aaaaacgttgaaacaacgttgtgtgccagctgggagtaCACAttacttat
ctggcacccagatgatgaaattttcatccgacacgctaaagctctaaaag
tcgggaaaattttcaacatctggaaggtttacattacggaattttgcgag
accacgtcaagaattttgcagcgggaggtctggtaacccagccctcgttt
tcggggattggtgggtccaaccgaaatatttctaGGTTTACGGGCAAGGA
CTGTTAAACCCAActgaggatgcggcacatcaaaaaccgactatcattcc
tctccgatgggaaattggcccgctccctttagagcttcagcgtgggcggc
cgccaatccgccatcggaatatcagataaacacATTACAGATAATTCAAG
AATATCTTGggaaatttataaacaaaaagcaGAGTTAAGCTCTAAGCTCC
ATGATCGGCAACATCAAAGAAACTAAACAGATACTTAAAAGCTACTTTAA
GACACTTTTAGAAAATAGAATGATCTCATTTTGTAATAAATCACAAGAGG
GTTTGTTTATAACTTGAAGCCTCACTTAGTATCTGTTTACAAATGAAAAG
TATGTGATTTCAATGAGAATCTTATACGTTCAGGAAATCTCAATTGAATC
CTGGACTGAACTGAAATCGTGTGATGAGAATCACGTCaaagaatacacct
tttcgaccgtattcgccaattgccgcgcgggcattttttttcctgtttta
cCACCCAAAAACcgccccagtctttttttttcgcacctaaaggcaataga
aaaaagtgtaaaaaggattggatcgagtttagggtggtaaatcaAATAAT
TAAGTGACGTGACTACAGTCGAAAAAGTGTATACCGTATGAATGGAATTA
TTAGGAAACGATTTGTCAATACCACAAATTTTGTCCATGCGTAAAGTATC
CTACTTGCCAAATAAAGTCGTATTTGAAATtataaataaattgaaagatT
CTAATTTGCAATACATCCCAGCTGGCATATAACGTCAAATAAatgacaca
caacgttatttcaacgttcatctaacgttatatggacgttgtgaacatta
aaggttttgtttttacataagtgttcccgtttcatatcagacacatattt
catatcaggacagtgcctGCCTATCACTGgtttaaaaaattctaccgggt
ctgtgagaagggagtgtagtTAAATGTGTAGTAAAACCTCATTCCTACCC
TAACTTTTCCTGCGTGATATCCGCGTCTCAACCcaactggcgtgccagtc
taaatATGTTCTAAGCATATAGAAAAATTCACGCCGTTAAAGCTGGAATC
TCAGGAGTATATTTTGACCATATTTTTAGATTTCCTATAGCCtagaaaac
gctatattgccaaaAACCAGTGTGTCTTAGCCTactgaatacgggcttag
ttaactaggctttCTCTGCATGGTGAGGATGAGGAAATCGAAAATGTATA
AGCACTTCCGAACATATCGTCAAGCCCTCCTTTCACAGCTTCCCTTCCAT
TATGCGGGTTATACcacctctctctctctctctttgcATGGTAGGATTTT
CTATATTAGCTCCTCTTTATCTTATTTTTCCTGTAGCCAAATGATCTCAA
TTTAGTCTGAATAACGTCACATGACGTCACATTATGACTACGCAATCAGC
GCTCCGCATACATAACCATAGTCCGTAAAAACCTGGAAGTCTGGAagctt
atttttttaactttttgtcagctttttcctttgttgctatcaaaaaataa
agatcaatttgctcagtttttgatcaagTTTTTGACCAAGTAcccctctt
gggattggtttaagattcaatcacatgatcaaaaagtgagcgaaacaaac
gcaagttcaagtaagaaacaatggaaagacacAAAAGGCTTCCGCAAAcc
gggttttttatacggactatatGGCGTAACCGACCAATTTGACCACGTTC
AAGCAATACTCCTCTCCTCTTATCAGTAACATTGTCTATatgaaatttga
tatttctaAGCAAATGCCAAACTCGTTCTCAATCCTTTAGATcgattttt
atgattctgacaGCGCTCACGGTTGTGTCACGTTCACCAGTATAAACAAA
AAGTGATGCAAGAGGCTCAGGGTACGTGACCGagatttgataataaaaat
ttttccttttttacttCTAGCTATTCCACCATCGACGCCAGGATGTCAAC
CACATCACGCAACACCGCATTTCCATGGCAGCTCTAAATCTTTAAACATG
ATCATTGGGTACAAAACAACACCTCAGTACCCACTCCACGCTATTGATAC
TATAAGCCAAAGAGATGTACACAATCTAGTTTCATACGCTGGGGAATTAA
ATTATAACACAGCGGGAACTCCACATGGCAGTAATAAAGATATTCGAAGT
CTTTATTCTACAGAAGATCACCATAATGTCAATAAAATGTATTTACCAAG
TCGCCAGAATTCGATCATCTGCGCGCAGAATCCAAGATTTTCAACATACG
GATATGTGAGTATTAAATaaagtcaactctctctaattcgaacttctgtt
atccaaatctttctgtaattcgaactaaaatatttctcCCTTCAGCttaa
aagtggtttaaattaatCTCTGTtactcgaatctttctctaattcgaaga
aaacttTTGGTCACATGAAGATCGAGTTAGAGAGAGTCAATTGTATTATC
TTTTGGGATTTTAATCTAGGATGAAATACTGTTACAAGTCAGTCTAATCG
AAAGCCAAAAATAGAACTTTTTAATCCTTTTTTGATTCGTATTAAAAGct
ccatttttaaaaattcgaCTAAACTGCAAGTTTCTGGAGTTTCACTGACA
AGAGCAATTTCTCCGAATGaaaaaaaGTCTTCTACTATCTAATCTATCCT
TTTGCCCTCCCTGTTCATATCAAGTAGACCTAATTTCAAAGTATGTATTC
CCCTACGgtaaaactttattatttttcCAACCTCGTTCGAATGCCTAATC
CCTTTTTTGACTGATGAGGATATAATCCCACAGATTTCTGTCcgaaaagc
ccgaagggctaggtCTCTCATACTTTAAGCTCTTCAAAGcaacaaaaatt
gaatatcgcaaaaaatattgctgttatttttttcgaaaacccgcgaagct
ccTTACTGGTCAAGCGCTGagattctattgtaatgtcacgtgacctatgt
aggatttcctacgaaagcacgacatctagccctttgatCTGTGGATTAGC
CCTGTAGGGAATGATAAACATGACATAAACATTTAGAGATAACgcaatat
tttccaaaatccGAGACCTGGGCCAAAActcatcaaataaaaaaaaaacg
tcgaTGACGTTCACCCTGGGATCAAGGGTGttgttttaagtcaaaattaa
aattgaaatttcgacTTACCGAATCTATCTTTTATTGACAATGATTTTCA
CAATCTTTCTTTTCACCAACATATTTAGCCACATACGGTTGTATTGAGTC
AAGGTTCATCAGAACTGGAGAAACACCAAGCAGCAGATATACCAAATTAT
GGAAAACTGGCCTGGTTTGCTTGTATATTCTTTTTTCCTCTTGGTTTGAT
TGCACTGAAGAAACATTACGAGGTAAAATGAATTTCAACATTCAgataac
taaagtctgtcccaATATTcctttcattttctaattctAAATCTCGCTAA
ATCTTTTCTATCTCATAATATCCTACTCcttattatcttttcaacaagca
aaaaatcactATCAAATTTTATATACTATCAAAAATTATATCCTGTTCTT
ACTTCACTATTTGTGAGTATTGTTGGTGtttttttAGTCCGCAaagccta
aaaaatgttcttaatttgttcttaatattttagccaacgaagccttatgt
tcttgtttagttttttcttatatagAAAGCGTGTATATAATCTGAATATA
TCTGATTCCGTTACAGACACGAAAGTTTCGTTATCGGAACCCGGATAAAG
CACGAGCAGCATCAGACGTGACTCGATTCTTTGGAGCGTTTTCTATTCTT
CTTGGAATTGTTCTTTACGCCCTAATTGTTGTAATTCGGTTACGTTTATC
TTACGAAAATGGCGAAAAGTTCATATGA Coding sequence (CDS) from alignment at sc0000126_pilon:99191..104768+ >XLOC_036693 ID=XLOC_036693|Name=XLOC_036693|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1362bp|location=Sequence derived from alignment at sc0000126_pilon:99191..104768+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACAATTGatgttaaagatattcaaatCATTAATAAAGATGACAATTG
atgttaaagatattcaaatCATTAATAAAGCTATTCCACCATCGACGCCA
GGATGTCAACCACATCACGCAACACCGCATTTCCATGGCAGCTCTAAATC
TTTAAACATGATCATTGGGTACAAAACAACACCTCAGTACCCACTCCACG
CTATTGATACTATAAGCCAAAGAGATGTACACAATCTAGTTTCATACGCT
GGGGAATTAAATTATAACACAGCGGGAACTCCACATGGCAGTAATAAAGA
TATTCGAAGTCTTTATTCTACAGAAGATCACCATAATGTCAATAAAATGT
ATTTACCAAGTCGCCAGAATTCGATCATCTGCGCGCAGAATCCAAGATTT
TCAACATACGGATATCTATTCCACCATCGACGCCAGGATGTCAACCACAT
CACGCAACACCGCATTTCCATGGCAGCTCTAAATCTTTAAACATGATCAT
TGGGTACAAAACAACACCTCAGTACCCACTCCACGCTATTGATACTATAA
GCCAAAGAGATGTACACAATCTAGTTTCATACGCTGGGGAATTAAATTAT
AACACAGCGGGAACTCCACATGGCAGTAATAAAGATATTCGAAGTCTTTA
TTCTACAGAAGATCACCATAATGTCAATAAAATGTATTTACCAAGTCGCC
AGAATTCGATCATCTGCGCGCAGAATCCAAGATTTTCAACATACGGATAT
CCACATACGGTTGTATTGAGTCAAGGTTCATCAGAACTGGAGAAACACCA
AGCAGCAGATATACCAAATTATGGAAAACTGGCCTGGTTTGCTTGTATAT
TCTTTTTTCCTCTTGGTTTGATTGCACTGAAGAAACATTACGAGCCACAT
ACGGTTGTATTGAGTCAAGGTTCATCAGAACTGGAGAAACACCAAGCAGC
AGATATACCAAATTATGGAAAACTGGCCTGGTTTGCTTGTATATTCTTTT
TTCCTCTTGGTTTGATTGCACTGAAGAAACATTACGAGACACGAAAGTTT
CGTTATCGGAACCCGGATAAAGCACGAGCAGCATCAGACGTGACTCGATT
CTTTGGAGCGTTTTCTATTCTTCTTGGAATTGTTCTTTACGCCCTAATTG
TTGTAATTCGGTTACGTTTATCTTACGAAAATGGCGAAAAGTTCATATGA
ACACGAAAGTTTCGTTATCGGAACCCGGATAAAGCACGAGCAGCATCAGA
CGTGACTCGATTCTTTGGAGCGTTTTCTATTCTTCTTGGAATTGTTCTTT
ACGCCCTAATTGTTGTAATTCGGTTACGTTTATCTTACGAAAATGGCGAA
AAGTTCATATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000126_pilon | genome | sc0000126_pilon:99191..104768 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 520-681:5417 |
| Aaloc | 376-519:4929 |
| Aaloc | 43-375:3623 |
| Aaloc | 1-39:1 |
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