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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000028_pilon:771023..776457+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036635 ID=XLOC_036635|Name=XLOC_036635|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5435bp|location=Sequence derived from alignment at sc0000028_pilon:771023..776457+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGCCCCTTTTCAAAGCATCATGGGATAGTGTGGAAAACGCAAAGGA
TTATATACTCAATTACAGGAACACAGAAGATTGCTCAACGAATGAGATGT
CGGCTCTAATCCCGCGAACATCTGTAATTGGACCATTGGAAAGGACTGGa
tctactttcgttttccacGTGAGAGTTCAAAGCACAAAACCGAGCACTTC
ATCCTACAGACCGGTAGCTCCACAACTTCGAAAACTTGTTCAAGGTAACA
TGATCTTTTATtataatatatttgaaaaagttttcattttacaCTTTCAT
AATCTTTAGGCCGaacagattttgaatttttcctttgGTCTTACTTTTCG
TTATAAACCTACAACATCTTAATATAGTCTAATTTtaacatcaaaacaat
aatcGTTCGGGTTTTTGAGAGTCTTAAGCACCTAAGATTCTGTCAGAGAT
TAAGAAAAACGTTCAACCTTGGGGAAGGATTTGACAACTTTATAAGCCAT
AGGCTCTCCCTAGATCTTTCCATGCTTTCTTTTTTAGAGGAACTCGCAGA
TGCTCAGATCCTCAAAAGTGGCAACAATTCCATTACACTTCTCCTTGGTA
ATGACACCGAAGAATACCACATTCTGATTGGTGCAAAGAGGTTGACTGCC
AAACCTGGACGATTTGTCATCACCAACCCTCCATATGATGATCAGAATAC
TGTCTTCATTACTGTTCTGTCTGCATCTTTTGGAGATCGACTTTTAAAGA
GCTTGTTCACAGTACAAGGTATGtcttttttcttccatttcagGCTTCAA
GACTTCAAGACTTGGGATGCATGGCTTTATAATAGAAGACTCGATTGTCT
TAAAcatcaaggatttattatactgTCTCAACAAGTGTCAAGACGTGTAC
ACACATAGCGTAAAAGATTTTAGTCTAAAAAAGCTACTTGAACTGCAATG
AGATTAGAAGTCGCGACTTTTGCTAGAACAACTGTTCTACTATTCTCTAT
ACCTATCTTTTCTTTATAGTTTGTTCACAAGTCTGTCCGGCTATCATTGA
AGGAGTTTGCGGATCAGATGGGAAGACTTATTCCAATCAATGTCAACTTG
AAGTTGCAGCTTGCAAAAGTCATGGTAAAATCACCAAAAAGAACGATGGT
CCATGTGAAAGTAAAGGTAAAACACAGAAAAAGCATGTCGGTCTAACCTT
TCTAAACTTGAAACTAGAAACCAGAATTATAGTAACTTAAAAACTCTGAT
TAATAACCACATGAGAAAATTGTCGATCCTTTGCCTAGGGATTGTCCATT
TTCAGTTGTGGATTTATAGTTCGATCACGTAAGTTTGGAATTTTAAATGC
GGGAAAGAAAAGAAACTGGGCAAACCTTTTTTCCCATTATGGAAGTGTAT
TACCAATGTATTAGTGATAACGGATTTCCACACGTGGAAAACGAATATCT
TTAACTTTCTAAAGGCACAATTACATCTAATTGCATCGGGGAATCAAAAA
CCCAAGTTCTTAATTGATTATGGATGGGTTGGGAAAAGAGAGATCGCGAG
CTTTTAACATGACTACTCTCTACAAGCTAGGGAAAGTAAATATCACGAAC
TGTGCCCTTGCTTGCTTTATTCTATTCTCTATTTCTGGATCGGGAAAAGT
GATTTATTAAATTAAgttaaggaaataaaatttccaCTCCAGTAGATCAT
ACAATGCCGCAAATTGGGTATTGGTGTAGAATTTACAAATGGCTATAAAT
TGGCTTAATCTTTTCAGGTAGCGATTTTGGGCACAACAACTGAACACCAT
GACTCTTTACACCAATAtcttaccgtgaaaagcacagctcaaaatcatat
atttacgctgtgccgacgaatcgagattctattcatcgcgcaatcagcga
agacaaaagtaaccatgacgaccatccaagatcttggatgagcgtcatag
tcgatatttttattcccgtcgttgaaaacacaacttacaaaaagtcatca
atgctttgtaaaaagagtcagtgatagagaatcataacataaaatctgtc
tattatttcgattcaattaaagtgacatttccataattaaaagtttagta
attactgttatacatttggggatcatgtaaaagatttctttcgaaataaa
ctcatttcaactacacttggaggtttctggggaattcgtaattagtaaac
tgcatactaatacagtctgctagacattaatatggtaatatttgctcttc
atctttgattttttctacagtgattagattgacacatgcgcgataaaatt
tctattatttgtcttcagaggttactattttctttgaaaacttaacctct
gatactcagggtaccaatatctctttttctttctctacCAATTTAGCATG
CTCTAACAAAGTTTGCGCACATCATAAGGCAAGTCCTGTGTGCGGCTCCA
ACAAATTAACTTATGAGAATGATTGCCAACTTCAATACGCTTCATGCAAG
AGTAATAGAAGTATAACGAAGGAACACGAAGGTGCTTGTGGCGATAGTAA
GTGATATATGCAAAGTTAATCCATCTCAATAACTTTTCTTTAAAGGGAAG
TTTACTCAAAGTTCTGATCCGCTGGTTCTACTTTATCTACTAGTAATTAG
TTGTGTAATAACAATACGCCCCTGCTTGTTTATTCttcaaagatattcaa
attcCTGTTTGAAAATACTTTCAGAATGATGCCTATACACTATTCCATCT
CACTCCTTCCCATGTTTATCACAGCAACCTAATATTAGCAGAAAATTATA
TCCTAAAAAATAACCaggttcaaaaaaatattttcataaggtaacttttt
catatattttaacTGACTTTGTTTAGGTGTGTTACTCGCAATGTCCGTTG
AATGCTCAGACCACCATCAAATTGATCTCGCATGGGAAGGCCCGAAATCT
CTCACATACAATCTGATAAAGTCTCAAAAACTTAACACCACCCACTATAA
AATTGTAGgtaatcaaactttgaaaggtGTCACGCGTCATTCTCTGACCT
GTTTGAAGCCGAATACAACTTATTCAATCTCACTGAATGTTGCTCATCAT
AACAAAAATGCGAAACTTTATATTATCAACCCACCATATCTCGACGTTTC
AACAGGTATAATTTTCTCTATCTATACTAAAACTCAACATATTCTGCGGA
ACGTCTTTCCATagtcaaaattttctcatttttgagtCGAATCAACTTAA
CGCTCTTGCTCCTAATATGGATTAGACTGTTCACAATACATTGCAAATGT
GTAGAGTATacgagactgttcatctaacgtttcctgACCATCTaaaaaaa
acgattaataactatttaaaaaaaacgagaaaaagaaCGATAAATCTCTA
AATagcgacaaatttcatatttcggGAATTAACTGCatatggtttaaaag
aacgacaaattacgcatgcgtataaggatctatttgggtgagctggaaac
attacatgaaccacggaggtaataaaaatatagatggagataacactcct
actattctattgtattgtatcattgatagcaaactgttgctttgttgctt
tgggaaaaagccattaattttgctttcgctcatgggaatacttgagtcga
agagaatttgaataaaatcacgctatatttttaatttgttcattgtgtga
tgacagttttgtttataaaacataagaaaaccttgcaagaaaaagcacag
aacatcgaatttAAAATGTTCGCTGCTCAGGATATCCTAGgcaatttttg
tcaatatttacatatttactaatgccaatctttcaactatattctatcaa
atttttgaggcagctgctattttagatctaaagatatttatagcaaagaa
ccttccacaaacaacaaagaattcgcaaaatttgaagaagtttacctctc
gaaagtttcccgataaaataaaaacttcttttaaaactataaattattac
tcgaaaaaaattcgcattttacctaaaaatacgaggtttcgttggacaga
aaactttactttagttcttataatctatatcttgattgatttttgctatc
aaggattggtaatcaaaggaggccgatttgaaagaaatttctaaagagtt
ttatgacttctctggctattacagaaaagttgttactccatctatttttt
attacctctataCAGTATACTTTACTGTTACCTCTGTCAGATGTGAGCAG
TGGAAGGTGATTTTTTGCACCCAGCAGTGACGCCTTTCGGAAAtctctaa
atttaattttgtaaaagaggCTGTTCTCAGGGTTAAAGGATTAAAACAAT
CTTGAATATTTTCACAGGATACCGATCAGATGGAAACATCAGatgttcaa
atattttttatgaagatcAATGCACTGGAAAAGCAAGCAGTAAGTTCCAT
GCTATTTTACCATCATTATCACAGTCTCtgatagacgatgctatcgcccg
tgtaatatattattatgatattacgATATAACAAATCTaattgtatatta
taaaacgtaatatgttgcgcggcgGAAAATAGAGTCTGTGCTAAATCCAT
TCATTTGTTTTGCTTGGACTGACCATAGAAAATTGAGCCCCTCCGACTAT
TTTTCGCCCGCGCGGACAAAATTTCCGCCCGACTGCTAATTTGATCGTGT
TTGaggttattctttatttttcgaatttgtcttagactatagcatagttt
AAGTCTCTGAGAATTACACTGTGACGACAGACCGCCATTCATTCAAAGGA
GGGGAAGATAGGTCTTATTCCGAAGAGTATACAATTTCCCCCAGAAAGCC
TCTTCTACACTTTACAGATATCATTTAAATAATGACGcaatgtttcgagc
tccaaccctgactgatgagatcgaaataatcaaaaatcgaaaatatcgaa
aaggtcaaaaaggaagaataaaaaaagtccaCTTTTTGCCGTCTACAACC
CCGACCACCGATTCATTTCTAATAGTTTATCACgtgaattaactacatgt
ggtctaaaagaacgacaaattacgcatgcgtgttaacGCAGAAGTCTGAT
ATTTTAACTCTTCGGAATGGTACCTTTCTCTGACTGAAAGAgggcataca
cgttttttttataagaacatccaaaaatttttaggccttctgatgctttt
tgatttttgataatctatatttttctaaaaatacgTTTAAATTCGTAAAT
ATTTGCTCATAAATCCTCAACCTCGATTGATAAGGTATAATTaatttcct
ataaaaaaagtgtgaaaatatCAGTATTCATTTTCccatgatgttttttt
tctaggTATGGCGTCACAGATTCAAATAACGAGCCTCGTTttcaatttat
tgttttcattcaTGGTCTACTACACCGTACATTGA Coding sequence (CDS) from alignment at sc0000028_pilon:771023..776457+ >XLOC_036635 ID=XLOC_036635|Name=XLOC_036635|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2406bp|location=Sequence derived from alignment at sc0000028_pilon:771023..776457+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAGCCCCTTTTCAAAGCATCATGGGATAGTGTGGAAAACGCAAAGGA
TTATATACTCAATTACAGGAACACAGAAGATTGCTCAACGAATGAGATGT
CGGCTCTAATCCCGCGAACATCTGTAATTGGACCATTGGAAAGGACTGGa
tctactttcgttttccacGTGAGAGTTCAAAGCACAAAACCGAGCACTTC
ATCCTACAGACCGGTAGCTCCACAACTTCGAAAACTTGTTCAAGATGCAG
CCCCTTTTCAAAGCATCATGGGATAGTGTGGAAAACGCAAAGGATTATAT
ACTCAATTACAGGAACACAGAAGATTGCTCAACGAATGAGATGTCGGCTC
TAATCCCGCGAACATCTGTAATTGGACCATTGGAAAGGACTGGatctact
ttcgttttccacGTGAGAGTTCAAAGCACAAAACCGAGCACTTCATCCTA
CAGACCGGTAGCTCCACAACTTCGAAAACTTGTTCAAGAGGAACTCGCAG
ATGCTCAGATCCTCAAAAGTGGCAACAATTCCATTACACTTCTCCTTGGT
AATGACACCGAAGAATACCACATTCTGATTGGTGCAAAGAGGTTGACTGC
CAAACCTGGACGATTTGTCATCACCAACCCTCCATATGATGATCAGAATA
CTGTCTTCATTACTGTTCTGTCTGCATCTTTTGGAGATCGACTTTTAAAG
AGCTTGTTCACAGTACAAGAGGAACTCGCAGATGCTCAGATCCTCAAAAG
TGGCAACAATTCCATTACACTTCTCCTTGGTAATGACACCGAAGAATACC
ACATTCTGATTGGTGCAAAGAGGTTGACTGCCAAACCTGGACGATTTGTC
ATCACCAACCCTCCATATGATGATCAGAATACTGTCTTCATTACTGTTCT
GTCTGCATCTTTTGGAGATCGACTTTTAAAGAGCTTGTTCACAGTACAAG
TTTGTTCACAAGTCTGTCCGGCTATCATTGAAGGAGTTTGCGGATCAGAT
GGGAAGACTTATTCCAATCAATGTCAACTTGAAGTTGCAGCTTGCAAAAG
TCATGGTAAAATCACCAAAAAGAACGATGGTCCATGTGAAAGTAAAGTTT
GTTCACAAGTCTGTCCGGCTATCATTGAAGGAGTTTGCGGATCAGATGGG
AAGACTTATTCCAATCAATGTCAACTTGAAGTTGCAGCTTGCAAAAGTCA
TGGTAAAATCACCAAAAAGAACGATGGTCCATGTGAAAGTAAAGCATGCT
CTAACAAAGTTTGCGCACATCATAAGGCAAGTCCTGTGTGCGGCTCCAAC
AAATTAACTTATGAGAATGATTGCCAACTTCAATACGCTTCATGCAAGAG
TAATAGAAGTATAACGAAGGAACACGAAGGTGCTTGTGGCGATACATGCT
CTAACAAAGTTTGCGCACATCATAAGGCAAGTCCTGTGTGCGGCTCCAAC
AAATTAACTTATGAGAATGATTGCCAACTTCAATACGCTTCATGCAAGAG
TAATAGAAGTATAACGAAGGAACACGAAGGTGCTTGTGGCGATAGTGTGT
TACTCGCAATGTCCGTTGAATGCTCAGACCACCATCAAATTGATCTCGCA
TGGGAAGGCCCGAAATCTCTCACATACAATCTGATAAAGTCTCAAAAACT
TAACACCACCCACTATAAAATTGTAGgtaatcaaactttgaaaggtGTCA
CGCGTCATTCTCTGACCTGTTTGAAGCCGAATACAACTTATTCAATCTCA
CTGAATGTTGCTCATCATAACAAAAATGCGAAACTTTATATTATCAACCC
ACCATATCTCGACGTTTCAACAGGTGTGTTACTCGCAATGTCCGTTGAAT
GCTCAGACCACCATCAAATTGATCTCGCATGGGAAGGCCCGAAATCTCTC
ACATACAATCTGATAAAGTCTCAAAAACTTAACACCACCCACTATAAAAT
TGTAGgtaatcaaactttgaaaggtGTCACGCGTCATTCTCTGACCTGTT
TGAAGCCGAATACAACTTATTCAATCTCACTGAATGTTGCTCATCATAAC
AAAAATGCGAAACTTTATATTATCAACCCACCATATCTCGACGTTTCAAC
AGGATACCGATCAGATGGAAACATCAGatgttcaaatattttttatgaag
atcAATGCACTGGAAAAGCAAGCAGATACCGATCAGATGGAAACATCAGa
tgttcaaatattttttatgaagatcAATGCACTGGAAAAGCAAGCAgTAT
GGCGTCACAGATTCAAATAACGAGCCTCGTTttcaatttattgttttcat
tcaTGGTCTACTACACCGTACATTGAgTATGGCGTCACAGATTCAAATAA
CGAGCCTCGTTttcaatttattgttttcattcaTGGTCTACTACACCGTA
CATTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000028_pilon | genome | sc0000028_pilon:771023..776457 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1114-1191:5358 |
| Aaloc | 1042-1110:4370 |
| Aaloc | 1009-1038:3125 |
| Aaloc | 766-1008:2879 |
| Aaloc | 616-762:2399 |
| Aaloc | 601-612:1154 |
| Aaloc | 478-600:1022 |
| Aaloc | 247-474:540 |
| Aaloc | 1-243:1 |
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