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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000042_pilon:1578802..1583689- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036468 ID=XLOC_036468|Name=XLOC_036468|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4888bp|location=Sequence derived from alignment at sc0000042_pilon:1578802..1583689- (Clytia hemisphaerica_ch_hm2_pilon)
GTAAACCTGACAGATTCGAAGATTTTTGAATGTAAATTTTTTGGAAGTCC
CATACCAGAAGTCTCATGGAAAAGCCCTAAATCTCAATTTATCATCAATG
ATACAATTGATAAAGAAAGTTCAACGATCACGAGTCGATTGATTTTGACG
AATATTTCTTGGTATGACCAAGGACCTGTAAAATGCAACGCAAAGAGCTT
GCTTGGAGAAGACTCTGGTTATGGAAACTTGTCAACTTTATGTAAGTTTG
TCTGTAATGTAAACCTATTTTCACTATTATTATTAATTTCTTATCATTCT
TTTATTTCATAAAATTGATCATCATAATTCAACTTTAAAGAACTTCATCC
TTTTTTTTCTAGCGAAACCTGTCATCAGTATGAACAAAAAATTGGTTTTC
GCACCAGAGAGGATCAACTTTACATTTCCAGAATGCAAAGTTCGTTCCAA
TCCAACAGCGAAAGTGACGTGGAAACGAATTTTTTGGTCGATGCCTGCTG
GACGTGTTCATGTCCGAGAAAACACATTGACGATCAACCATGTTCAATAT
TCGGACGAAGGTTTCTATGTCTGCGAGGCTGATAATTTCCTAGGTGAGTT
TGTGTGAATATAAAGCCTACTTAGCTTATACCGTCATGGTAAAATAAGGG
GTTTAACTTCTAATATCTATAATATATGGATAAGAGTTTAGACAAGGTGG
ATCGGAGACGTATTGTGTAACTTTTGGTCTCAAATATTGGCCAGCCTCTT
ATAAGTATAAGTTTGTGTAAGTGTAAATTTGTCCCCTCTATACAATCATA
TTTTCTATTTATAAGGGCTGCCTGCAACCATAACTGTTTGGCGGAAGGGT
GGAAAAAGATTCTCATTCAGCTTCAAATCTCTCACCGAAGGATCGATAGA
GCCCATCTTTCGGTTCACTTATGCCATTAGAATATAATATAGACCCGAAG
CAATGACATTTAGACAAAAAAGGTGGAAGGCGGCCGCCTATTCGCCAGGC
CTAGGCGCTGAGTTGGCTTTTTGCACTTTGAAAAGAGAATGAGGCACTCT
CTTCAGTTCTTGGACCTGGGTTGAGTTCGATATCCCCTGATAAAAAAGTG
TGGAATCAAACGTAATTAAAAAAGAGGTTTTCGGATCTCCTGAATAATAC
CTTAAGGGAACTTATTTTGGCGAGAACAAATTTTGAAAAGCGGCAAAAAT
CCTGAAAATTTTTTATTTTGGCGAGAATTTATTTTGGCGATTGAAGAATT
TTTATAATTTTGGCGAGAACTAATTTTGGCGAATAACAGCGTAAATCTGT
TCTATTTTGCCTTATTTGAAGCTTTTTTTGTGAACTCAAAAAGTTATTTA
GGCAAAATACCAAAAAATTTAATTTTGGCGAGAACTTATCTTGGCGAGTG
AGCAAAATATTTAATTTTGGCGGGAACTAATTTTGGCGAATTTTTCTTTA
AATTCGCCGAATTCGCCAAATTTAGTTCCGTTAAGGTAATTCTGCATTTG
GATATTGAGCATGGCGTTCTAAATTACAGTCCTTATATTGAGCAAATACA
CCATTTTTTTTGAAACATGTAAGAAATCAAGTGATGTTTGAAAAAGTGAC
TCATACGATTTTGGAATTGCGAATGAAAGGAGTGTAAAGAAAGCTAGAAC
GAAACTGGAACGAAATTTTTTGTTCTTGGTTAGTACTGCTACTGAGAAAA
ACAAGTACTTTTCGAAACTTAGATCTAGTTCTTCTTTTTATTACAGGAAA
AGATAAAAAGACTATTCAATTGAAAATCAAGCCTTTTGAAATGCACCAAA
CTTCGGCATCGAAAATCTATATTCCATCAGGCGAAAATGCAACAATATCG
TGTTCAGCATACGGAAATAACCATGAGATGACCGGAACAATCACGAAATC
CGGAGAAAAGATTTCATCAAAAGAGGAACAGAAGACAGGGAATCTCTTTG
AGGTGAAAGCGAATGTTACAAGTGAGGGGACCTACCTTTGCACGATTGAA
AATAGAAAAGAGAAGGCCGAAAGCGCAACACTCGTCAAACACTTCAAACG
TAAGCAAACTAATTTTTGATTTGCAGCGAGACAAAAAATCACAATCAGAT
AGGCAACATATATTCTGAATATGGTTAATTAATTAATAAAACGAAAATTT
GTTAAGTGGGGGAGCGCGTTTATAAGCAAGTCTTCATTTTTTCGATTTTT
TCCGATCATAATATAACATTCAAATCCTGAATTGTCTTTTCAACAAGCAC
AAAAACAATATTCTAGCAAGGGACAGCTTTATTACACTGTGCATTATAGT
AGGGAGCCAAGCCTTGGGTCCGTGACATCTTTTCTACGACCTAGCCATTT
TTTTTCTATTCAAAAGAACAGTATATTAAAATATATTTTTGAGAGGAAGG
ACGCGGATTAGACCCGGGAAAACTTTTTATAACCAAAATAGTGACGCCAT
AGGCAAAACTGCAAGGGAAGTAAGGGGTAGAGAAATAGCTGATTTTCAAA
AGTCAAAATAAACGAAAATGATTGGTACTATCTGAAAGAGCATGAAATTC
TGAGCAAAAAAATGTATTACAACAACTCTCTGACTAAAACACACAAAGAA
ATACAGCCACTTGAAGTTCAAAAACATACCGACGTCATTACGATCAAGAC
AGCAAGATTTGACGTCAAATCACAGTAGAGTTGGCAGTTAGTAGTTCTTA
AAGCAGCTGTATTCCTTTTTGTGTTTTAGTCGAGAGAGAGAGTTGTTGTA
ATCCCGGGGGGGGTACTTAGGCAAAATGGGTGCCGGGTATGTGCGAGCCA
TAAGGGTACCTTTTTTCATTCCTCAAAAGTCTCTCAAAGGGGTACAAATT
CTAAAGTTAGTCTCTGAAAGGGTCCCAAAATCACAAAAATCAAAAATTTC
TCTCTCAAAGGGTCACGTAGACTAGCAAACTAGTCTGTAAATTAATCATG
TCAGAGGGCGGGAACATAAAGGCGGCGGGCGTTTGCTAGAATATGAGCTG
CGTAGGAGAGCGAGCAAAAGTTGGTGAGAGGCTGCTGATATAGCCCTCGC
CTCAGCCCTCGCCGCCGACAAAATTTCTTCCTACGCTTACCTAACTCCTA
CGCTCACTTTTCCCGCGTGATACCGTTCCAGCCCGACTGGCGTGCCAGTC
TAAGGGTCACGATTTCCTAGAATTTTGACCAAAATTTGGTGAAAATCAAA
CCAAAATTTGGAAAAAATGGACCAAAATTTAGGAAAAAGTCTCTCAAAGG
GTCCCAAAATCACCAAAATTTTGTCTCTCAAAGGGTCGATTTTCGATTTT
CGGCTCGGACATACCCGTCACCTCGCAAACCTAGTACCCCCCCCCCCCGG
GGTTGTAATACAATTTTTTTGCTCAGAATTTCATGCTCTATCAGATGGTA
CCAATCATTTTCGTTTATTTTGGCTTTTGAAAATAAGCTATTTCTCTACC
CCTCATTTTCCTTTGCAGTTTTGCCTATGGCGTCACTATTTTGGTCGTAA
AAAGTTTTCCTGGGCCTAATCCGCGTCCTTCCTCTCAAAAATATCTTGTA
ATTTACTGTTCTTTGGAATAGACTAAAAATGGCTAGGTCGTAGAAAAGAT
GTCACGGAACCCCAGGCTTGGCCCCCTACTATTATTGCGAGACAATTAAA
GAGCCTACATCAGAACTAACTATTAATGCGAATTTAAAATTCCTCGTTTT
TGTAGTATCATCCAGTCTCCTTAGCAGCGCTCAACAATCACTTGTCGGAA
GAGAGTTGAGAAAGATCAATAAAATTGGGAAATACAAGAAATGTTTTGGA
TTGAGTTTACCCTCCACTACTTTTTACACTTCCTGTGGTGGTAAAAAAGA
CACCATTACCTTCTTCAGAATTAAAGACATGTATAAAAGAAATCGGTACG
GTAGTCGATATTACGCTTGGGGAAGCCGCTACATTGGAGGATTCACTGAT
CTGCCATGGCAAAAAGGTAAATTGTTTTACTGTTTTAATTAACCATCCAC
TACGTCCATATTGTCCATACTAGACTAGTCGGTTATTACTTATAACCTTA
TAATAAAACTGTCAATCAAATAATGTATACACTAATTAAATATTCAGCGC
GCGTGAGAGAAAAGTAAAATAACCGACTAGAAGCTACTTCCAACGCCTTT
TTTTCTTCACCTAAAATCCTAAAGGGACCCGTGCGGGATTGCATTTATTT
TTCTTTCTGTTTATTGCGTTTTTAGAAATGCTCATTTATTAATATGTTCC
CATGTTCAATGTTACTATGAAATATCATTTAGTCAAAAAAGTTGGATGGA
TTCTCAAAAACCTAAGAAAAGTTGTAAAATTAAACAAAGTTTTTTGAGGG
AAGTAGCTTCTAGTCGTTGAAATTCAGAAAAGAGACACAACTTCACCCCT
TCGATTCTTTTTATTTGGAGCTTGATTTTTTGTATATGGGTCTGCTTTCA
ACAACTAGTCTACGTCCATACTTACTCTTTTTTTCCTTTTTTAATCAATC
GGTACACGTTTTTGCGTCAAATAATTATAACTGCAGTATTTAATGAGTTT
GCAAAAAAAAAAAATTGACAAAAAACAAAATGTCTACCCCTTTTTTGTAA
TTAGTAATCCGATAATTATTCCAATTTATTGTTTTTGTTGCAGACAACCA
GATGGAGTACAGCAACTTAACAGCATTATTCGACCTCAGCAACCAAAGAA
TTTATCCCAGCATCGAAGGAAGAGAAGCAGTTTGTTACCACGATGGTTAC
GGCCCTTGTTTTGGAAATAAGGACTTGTATGTTGCAAGTGATGGGAAAAT
CTACAGATCAAGCTTAGGGAGTAGCTTCAATCCAAAACCAACATTTAATC
AAAAAGAGGTTCAATTCGAGACATTTTATCTGATGTAA Coding sequence (CDS) from alignment at sc0000042_pilon:1578802..1583689- >XLOC_036468 ID=XLOC_036468|Name=XLOC_036468|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2562bp|location=Sequence derived from alignment at sc0000042_pilon:1578802..1583689- (Clytia hemisphaerica_ch_hm2_pilon)
GTAAACCTGACAGATTCGAAGATTTTTGAATGTAAATTTTTTGGAAGTCC
CATACCAGAAGTCTCATGGAAAAGCCCTAAATCTCAATTTATCATCAATG
ATACAATTGATAAAGAAAGTTCAACGATCACGAGTCGATTGATTTTGACG
AATATTTCTTGGTATGACCAAGGACCTGTAAAATGCAACGCAAAGAGCTT
GCTTGGAGAAGACTCTGGTTATGGAAACTTGTCAACTTTATGTAAACCTG
ACAGATTCGAAGATTTTTGAATGTAAATTTTTTGGAAGTCCCATACCAGA
AGTCTCATGGAAAAGCCCTAAATCTCAATTTATCATCAATGATACAATTG
ATAAAGAAAGTTCAACGATCACGAGTCGATTGATTTTGACGAATATTTCT
TGGTATGACCAAGGACCTGTAAAATGCAACGCAAAGAGCTTGCTTGGAGA
AGACTCTGGTTATGGAAACTTGTCAACTTTATCGAAACCTGTCATCAGTA
TGAACAAAAAATTGGTTTTCGCACCAGAGAGGATCAACTTTACATTTCCA
GAATGCAAAGTTCGTTCCAATCCAACAGCGAAAGTGACGTGGAAACGAAT
TTTTTGGTCGATGCCTGCTGGACGTGTTCATGTCCGAGAAAACACATTGA
CGATCAACCATGTTCAATATTCGGACGAAGGTTTCTATGTCTGCGAGGCT
GATAATTTCCTAGCGAAACCTGTCATCAGTATGAACAAAAAATTGGTTTT
CGCACCAGAGAGGATCAACTTTACATTTCCAGAATGCAAAGTTCGTTCCA
ATCCAACAGCGAAAGTGACGTGGAAACGAATTTTTTGGTCGATGCCTGCT
GGACGTGTTCATGTCCGAGAAAACACATTGACGATCAACCATGTTCAATA
TTCGGACGAAGGTTTCTATGTCTGCGAGGCTGATAATTTCCTAGGAAAAG
ATAAAAAGACTATTCAATTGAAAATCAAGCCTTTTGAAATGCACCAAACT
TCGGCATCGAAAATCTATATTCCATCAGGCGAAAATGCAACAATATCGTG
TTCAGCATACGGAAATAACCATGAGATGACCGGAACAATCACGAAATCCG
GAGAAAAGATTTCATCAAAAGAGGAACAGAAGACAGGGAATCTCTTTGAG
GTGAAAGCGAATGTTACAAGTGAGGGGACCTACCTTTGCACGATTGAAAA
TAGAAAAGAGAAGGCCGAAAGCGCAACACTCGTCAAACACTTCAAACGAA
AAGATAAAAAGACTATTCAATTGAAAATCAAGCCTTTTGAAATGCACCAA
ACTTCGGCATCGAAAATCTATATTCCATCAGGCGAAAATGCAACAATATC
GTGTTCAGCATACGGAAATAACCATGAGATGACCGGAACAATCACGAAAT
CCGGAGAAAAGATTTCATCAAAAGAGGAACAGAAGACAGGGAATCTCTTT
GAGGTGAAAGCGAATGTTACAAGTGAGGGGACCTACCTTTGCACGATTGA
AAATAGAAAAGAGAAGGCCGAAAGCGCAACACTCGTCAAACACTTCAAAC
TATCATCCAGTCTCCTTAGCAGCGCTCAACAATCACTTGTCGGAAGAGAG
TTGAGAAAGATCAATAAAATTGGGAAATACAAGAAATGTTTTGGATTGAG
TTTACCCTCCACTACTTTTTACACTTCCTGTGGTGGTAAAAAAGACACCA
TTACCTTCTTCAGAATTAAAGACATGTATAAAAGAAATCGGTACGGTAGT
CGATATTACGCTTGGGGAAGCCGCTACATTGGAGGATTCACTGATCTGCC
ATGGCAAAAAGTATCATCCAGTCTCCTTAGCAGCGCTCAACAATCACTTG
TCGGAAGAGAGTTGAGAAAGATCAATAAAATTGGGAAATACAAGAAATGT
TTTGGATTGAGTTTACCCTCCACTACTTTTTACACTTCCTGTGGTGGTAA
AAAAGACACCATTACCTTCTTCAGAATTAAAGACATGTATAAAAGAAATC
GGTACGGTAGTCGATATTACGCTTGGGGAAGCCGCTACATTGGAGGATTC
ACTGATCTGCCATGGCAAAAAGACAACCAGATGGAGTACAGCAACTTAAC
AGCATTATTCGACCTCAGCAACCAAAGAATTTATCCCAGCATCGAAGGAA
GAGAAGCAGTTTGTTACCACGATGGTTACGGCCCTTGTTTTGGAAATAAG
GACTTGTATGTTGCAAGTGATGGGAAAATCTACAGATCAAGCTTAGGGAG
TAGCTTCAATCCAAAACCAACATTTAATCAAAAAGAGGTTCAATTCGAGA
CATTTTATCTGATGTAAACAACCAGATGGAGTACAGCAACTTAACAGCAT
TATTCGACCTCAGCAACCAAAGAATTTATCCCAGCATCGAAGGAAGAGAA
GCAGTTTGTTACCACGATGGTTACGGCCCTTGTTTTGGAAATAAGGACTT
GTATGTTGCAAGTGATGGGAAAATCTACAGATCAAGCTTAGGGAGTAGCT
TCAATCCAAAACCAACATTTAATCAAAAAGAGGTTCAATTCGAGACATTT
TATCTGATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000042_pilon | genome | sc0000042_pilon:1578802..1583689 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1039-1281:244 |
| Aaloc | 778-1035:1182 |
| Aaloc | 475-774:3141 |
| Aaloc | 244-471:4525 |
| Aaloc | 1-240:4889 |
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