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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000076_pilon:513941..519229- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036374 ID=XLOC_036374|Name=XLOC_036374|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5289bp|location=Sequence derived from alignment at sc0000076_pilon:513941..519229- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAAAGAAGAAAACCAGCTGGTCACTAACAGCTCTGGTGATCCTCAA
TATCCTTTGTGGGCATCTGAAAGCCAAGAGACAATGTGGAAATATCACTT
GTAACTCACTCAATGGATTTTGCATTGGTGATTCTAAATGTGAATGCAAC
TATGGCTGGTTTGGGCAAACGTGTGGGCAGCCTTGCCAGTGTAATGGTTT
GTCTCCCTGTGACCAAGATTCTGGTAAATGTTTGAAATGTGTCAATCATT
CTGAGGTAAATAATATCTCAATGATGTTTCACAAAGGATTATCCAGTAAT
CTGGAGCTTTTTAGACAGTCTTTCAATTTGTTTTGACACCTCTCTGTACC
TAAAGTCTGTTCACGATAAGTGTGCACTCTTTTTTCTTTTACCTATAACT
TTTGAAGGAATTCTTCAATCTTTGTAAATTTGGTATCGTTGGAAAGATAT
TTGTGAGTGGAACAATTTGAAGGCGTAGTGGTGTAGTGGTTATCGTGCTT
GACTTCTGTCCAGGAGGCTCGAGTTCGATACCCACCGTGGCACTACGATT
CACTTGGCAAGTGAATGCTCCTTCGCCCGGGTCAACCCATGCCATGTGAG
GGGAATTGGGTACCATAACTCTGATACAAGAGTATGGGTAGATATTTCAG
ACATTGTGGTGCGCCGTGACACTCAGGAGGTTCTACACCTGCGAGGACAT
CCGTTCTCCCGTGTAGTTCGATTGTCGTGGTATACACCATGGCTCGGCAG
CTCGCATCTGCAGGGTTGCAATGTCTGCTTGCGCTGTGATTCCTACTCCA
CCGTGGGTAGGACCCATTCTGATGCATCGGAGGGCATATCTATATCTATA
TCTATATCTACAATTTGAAATAAAAAGTCTTTAAAAAAGTTCTAAAAATG
AAAAAAAAAATGAAGATCTTGCAGAAAAGCGCTATAACAATCATTTTCAC
TGAAGTGAATTCTTGATCATCGAACGTCATCAAACTTCTCAAAAACATTA
GTTTAAGCTGTTTTCTGCTGTTTTTTGGGGTCAATCACTTATTAACTTTG
TATCATAACTTTATATTGAATGAATAAATATTTCAGTGAAATTTCTTCAC
AGTGATAACTTCCTAAGATCAAAGAATCTCTCCAGTAAAAATGAAAGTTA
TAGCACTTTTCTACAAGATCTTCATTTTTTTCTTCTTCATTTTCTCATCT
TCGTTTTTAGAATTTTTTCAAAGATTTTTTTATTTCAAATTGTTCCACTC
GCAAATATCTTTCCAACGATACCAAATTTACAAAGATTGAAGAATTCCTT
CAAAAGTTATAGGTAAAAGAAAAAAGAGTGCACACTTATCGTGAACAGAC
TTTACATTATATTATCCGCCTGTCTCCATTAGTAGAATTGAGTGTCTTAC
CCAAAACTGGAGGCAACTGGGGTCGGGACTATTTTCTAAAATTTGAATAT
CAATATTTGTTGAAAAGGTACGAAAGCGTAACGATTGCAACTATTTTCGA
TAATTCTCTTTGTTTATGCTATATATCCTTTCCTGTCAACGAATACCACA
AATCCTGTCAACCTTTCTTCAGGGTGAAAATTGTCAACGATGCAAACCTG
GTTACATAGGAAGTCCACGACACAACCAACAATGTATTTCATGTCAAGAA
TTTTGTCATGGAAAATCAAACATCTGTGTCACTTCAAATTCTTACAACTT
TTGGAAAGGCATCATTGAAAACGATAATCTGAGACCCTATCAAGTTATAA
AATTGGTAGGTGTATTATTTTTAGATACCCATGTTTTGCTCTCACTGGAA
AATTTGTGGAAAATCATTCATTGAAAAAGTTTTTACATATGCCACCTCAC
AATAAGTCACTTGGTGCTTGAATTCATTCGCAATAAATGCCCACTAATTT
AGAAACTACTCTCATGCTGATATTTTCTCTACATGGTAATGCAAAAAGTC
CACAATCAAAACGAATGAGCTTTGGTTATGAGCTTCAATTAAACATAAGA
GATGGACCGCTTATGAAATCTTATCAGGAATTCAAATAATGTCAAAAGTC
CAGTTAGTTGCTGCTTAAAATCTCTTTGTCTCGGAAAGTATACAAAGTAT
GCGAGAGTATGCGATATTATGTTTGGATACTCTACATGTATACGAATTAC
CCTCTTTTTTTCCTTACCATAGCTCTCAGATGCTATGGCCTTGAATCCTT
CCATTCCCAATGAAGCGAGCTGTTTGTACTGCAAAGATGGAAGATACGGT
CATCGCTGTCAACTTTCTTGTGGTAAAGGTTACTATAGAACAAAAGACAA
AGGTTGTAAAAGGTTAGTAATTGTAGCTGAAACTTAAGGGCGTACAGTGA
AATCTTCATAACTCAAACATCTATTACTCAAATGTCTCCTTAACTCGAAC
AAGTTTGTTGGTCCCTTCAATAAACAATGCCTTATAAACTAGTCTCCATA
ACTCGAAATGTCCAAAACTCGAACAAGTTTGCGTTGGGTGTTTATGGGAC
TCTACTGTATAATATTTTCCGATATTTGCGTATTTTTCATAAAAAGTAAG
TTTTGTGCGTTCCGATGATTAGATATAACACCACAATGCTTCTTCATAGA
GATTCAGCCCTCAATTTTTACTGTTTTTGTAAGTTCATAAACAGAGGATA
TCTGCTCATGAAAATTATATTTTCCTCCAAATCTTGTGCACTTTCTATCG
GAAGCCTCCAGCTTCGTGATGTTTTACCGTACGAGCCAGATAAAACAGTG
CCAATCAGTAAAAGTAATAAAGCCTTGGTTAGGCTGCTGGTATCCACTAA
CGGATTCGTGCTCCTTATATATACTACTTGCAGTTTTGCAGTCTTGGTGA
GATACACGAGGACGATTAGGTTTTTCAGATAACCGTAAAAAATGTTCGTC
TTAGGTGTAGCTGTAACGAGCATGCGACTCAGTGTGACCAAGGAACTGGT
CAAGGTTGTCGTTGTCTTCATAACACACTGACTAAAGGCACTTATCAATG
CCTCGACCATCGAACTTGTCTTCTACTGCAGGTTAGTAACTCAGCTTTAT
ATACCTTATAACACACGTATTACTAGGCAAGTATTCAACGGCCTTGAAAT
CTGCTTTTTCAAGGAAACAATGGCTGGTTTTAATTAAGGGGGTTTTTATT
AAGACGAAATTTTTCAATTCGTTTTAATAAAATGACTAGGTAATACAAAT
TATCTTATACAAAACATTTATTAGATAGGGCTACTCCATCCTTCCCAATC
CAAGGCATTTAAAGTAAAATATTGCGTCATATTTACAAAAAACAGACCCC
AGTCGGCGCCGGGAATCTGTTAATCAAAACAAACCACTACTACTATGGCT
CGAAGTGAGAAGGGGAGAGAATAGTCTTGATTCATCAATTTCCAGCAACA
AAACCTGATTTACTTTTAATGCATTATTTAGCTTTAGCCAAGGACGGAGT
AGCCTATCCATCTAGTACAGACCCAGTAGACCCCAGCCCAGTTACACAAT
AAAAATTCGCCTCAAAATCGTTGATAAATACACTAAACTCACATTCTTAT
TAAGAAAAAGACTGAAAAAGATTTTAGCTAATACTAACGAGTCTTTTCGA
GCTGTAAAAAATAGTTGAAACTTATAGCTCTAAGCATATACCGTGAAAAG
CACAGGTCGAAATCACATATTGACGCTGTGCCGACGAATCGAGATTCTAT
TCAGCGCGCAATCAACGAAGACAAGAGTTAACCATGACGACCATCCAAGA
TCTTGGATGAGGTTCAAAGTTGATATTTTTATTCCCGTCGTTGAAAACAC
AACTAAAAAATATCATCAATGCTTTTTAAAAAGAGTCAGTGATAGAGAAT
CATAACATAAAGTCTGTCTATTATTTCGATTCAATCAAAGTGGCTTTTCC
ATAATTAAAAGTTTAGTAATTAGTGTTATACATTTGGGGATCATGTATAA
AGATTTCTTTTGAAAGAAACTCATTTCAATTACACTTGGAGGTTTCTGGG
GAATTCGTAAATAGTAAACTGCATACTGATACAGTCTGCTAGACATTAAT
AAGGTAATATTTGCTCTTCATCTTTGATTCTTTCTACAGTGATTAAATTG
ACACATGCGCGATAAAGTTTCTATTATTGGTCTTCAGAGGTTAATATATT
CTTTTAAAACTTAACCTCTGATACTCAGGGTACTAAGCATAGCAATCTGA
AAATTCTTACCTCTATTCTCAATGAACTTCTTGATTTTATCACTAGATCC
CAATAAGGCAAAAAAAAAAGATTCTTACCTTGCCACTAATTTCTAACTTG
TTTAAGCATCAATTTCTTTACAGTGTTCGTATTGTCGTAACGGTTACATC
GGGTCCCCTACAAACGGTAAACAATGCTACAAAAAGACCAATGAGAATTT
CCTCTACAAAGACAATCTTCATCCGGGAAATATAAAATCGTACGTTTTAA
GCTACGATCAAGATCAAGGGATACGACTCAATATTGATGTCCCAGAAGGC
GCTGTTGATATTTATCTCACCGATAACGAACATGTTTTCAGAGCAACGTT
AAATGAAAATGGTACACAAAACCTGTTTTACAACGACAATGAAAAGCCGA
CTCCCGAGTATACAGCTGATGAAGATATATCGGCGATACTTCTCGGTAAC
CAACTAATCACTTTTAAGAGATACCAGAAAGGAGTTTTAGCTATGAAGAA
TATGCAACACCGCGCCATAATTACTATAGACCCAAAAGATAAACATTTGC
GGAGAGTTCAGTTTTACGTAGTGATTAAGAAGAGCGACGATTCAAGACCC
ATAGCAAAAACAACATTGTATTATGACCAGGGAATGTTGGCCCTAGACAT
GAAGCTACTCTTTGTTGGCCTCCTAATGAGCGCTTTAACGCTGGTTGTTG
AGCTAACTTTAGTGTTCCGATTAAGGAGCGAGTATATGAATAACCTGAAC
AACGAGCTGAATAATACACATCTAAAGGAGCTTGAAAATAGACCTATGCT
TCAATACATATTTGATGCACCACCGTTGAGTTTTCAGCACGAGAGAAGAG
ACTTAAGAGTATTACCGGTAGCGGTACAACAAACAGCATTTGATGATGAT
GTTGCATTTTTTTCAGTACTGGTTCAACTACCAGGTTATCAAAACTCGAA
ATGTGATATCACTTTTGGTACTGGGATTTTCCTTTTGAAAAGTGAGACTA
AAGATTCGAAAAGAATTGAACCTATTAAACGAACCACGACAGAAGAGTAC
GATCTAGAACATATTAATTACGGGCACAATATAGCATGA Coding sequence (CDS) from alignment at sc0000076_pilon:513941..519229- >XLOC_036374 ID=XLOC_036374|Name=XLOC_036374|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3342bp|location=Sequence derived from alignment at sc0000076_pilon:513941..519229- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTAAAGAAGAAAACCAGCTGGTCACTAACAGCTCTGGTGATCCTCAA
TATCCTTTGTGGGCATCTGAAAGCCAAGAGACAATGTGGAAATATCACTT
GTAACTCACTCAATGGATTTTGCATTGGTGATTCTAAATGTGAATGCAAC
TATGGCTGGTTTGGGCAAACGTGTGGGCAGCCTTGCCAGTGTAATGGTTT
GTCTCCCTGTGACCAAGATTCTGGTAAATGTTTGAAATGTGTCAATCATT
CTGAGATGTTAAAGAAGAAAACCAGCTGGTCACTAACAGCTCTGGTGATC
CTCAATATCCTTTGTGGGCATCTGAAAGCCAAGAGACAATGTGGAAATAT
CACTTGTAACTCACTCAATGGATTTTGCATTGGTGATTCTAAATGTGAAT
GCAACTATGGCTGGTTTGGGCAAACGTGTGGGCAGCCTTGCCAGTGTAAT
GGTTTGTCTCCCTGTGACCAAGATTCTGGTAAATGTTTGAAATGTGTCAA
TCATTCTGAGGGTGAAAATTGTCAACGATGCAAACCTGGTTACATAGGAA
GTCCACGACACAACCAACAATGTATTTCATGTCAAGAATTTTGTCATGGA
AAATCAAACATCTGTGTCACTTCAAATTCTTACAACTTTTGGAAAGGCAT
CATTGAAAACGATAATCTGAGACCCTATCAAGTTATAAAATTGGGTGAAA
ATTGTCAACGATGCAAACCTGGTTACATAGGAAGTCCACGACACAACCAA
CAATGTATTTCATGTCAAGAATTTTGTCATGGAAAATCAAACATCTGTGT
CACTTCAAATTCTTACAACTTTTGGAAAGGCATCATTGAAAACGATAATC
TGAGACCCTATCAAGTTATAAAATTGCTCTCAGATGCTATGGCCTTGAAT
CCTTCCATTCCCAATGAAGCGAGCTGTTTGTACTGCAAAGATGGAAGATA
CGGTCATCGCTGTCAACTTTCTTGTGGTAAAGGTTACTATAGAACAAAAG
ACAAAGGTTGTAAAAGCTCTCAGATGCTATGGCCTTGAATCCTTCCATTC
CCAATGAAGCGAGCTGTTTGTACTGCAAAGATGGAAGATACGGTCATCGC
TGTCAACTTTCTTGTGGTAAAGGTTACTATAGAACAAAAGACAAAGGTTG
TAAAAGGTGTAGCTGTAACGAGCATGCGACTCAGTGTGACCAAGGAACTG
GTCAAGGTTGTCGTTGTCTTCATAACACACTGACTAAAGGCACTTATCAA
TGCCTCGACCATCGAACTTGTCTTCTACTGCAGGTGTAGCTGTAACGAGC
ATGCGACTCAGTGTGACCAAGGAACTGGTCAAGGTTGTCGTTGTCTTCAT
AACACACTGACTAAAGGCACTTATCAATGCCTCGACCATCGAACTTGTCT
TCTACTGCAGTGTTCGTATTGTCGTAACGGTTACATCGGGTCCCCTACAA
ACGGTAAACAATGCTACAAAAAGACCAATGAGAATTTCCTCTACAAAGAC
AATCTTCATCCGGGAAATATAAAATCGTACGTTTTAAGCTACGATCAAGA
TCAAGGGATACGACTCAATATTGATGTCCCAGAAGGCGCTGTTGATATTT
ATCTCACCGATAACGAACATGTTTTCAGAGCAACGTTAAATGAAAATGGT
ACACAAAACCTGTTTTACAACGACAATGAAAAGCCGACTCCCGAGTATAC
AGCTGATGAAGATATATCGGCGATACTTCTCGGTAACCAACTAATCACTT
TTAAGAGATACCAGAAAGGAGTTTTAGCTATGAAGAATATGCAACACCGC
GCCATAATTACTATAGACCCAAAAGATAAACATTTGCGGAGAGTTCAGTT
TTACGTAGTGATTAAGAAGAGCGACGATTCAAGACCCATAGCAAAAACAA
CATTGTATTATGACCAGGGAATGTTGGCCCTAGACATGAAGCTACTCTTT
GTTGGCCTCCTAATGAGCGCTTTAACGCTGGTTGTTGAGCTAACTTTAGT
GTTCCGATTAAGGAGCGAGTATATGAATAACCTGAACAACGAGCTGAATA
ATACACATCTAAAGGAGCTTGAAAATAGACCTATGCTTCAATACATATTT
GATGCACCACCGTTGAGTTTTCAGCACGAGAGAAGAGACTTAAGAGTATT
ACCGGTAGCGGTACAACAAACAGCATTTGATGATGATGTTGCATTTTTTT
CAGTACTGGTTCAACTACCAGGTTATCAAAACTCGAAATGTGATATCACT
TTTGGTACTGGGATTTTCCTTTTGAAAAGTGAGACTAAAGATTCGAAAAG
AATTGAACCTATTAAACGAACCACGACAGAAGAGTACGATCTAGAACATA
TTAATTACGGGCACAATATAGCATGATGTTCGTATTGTCGTAACGGTTAC
ATCGGGTCCCCTACAAACGGTAAACAATGCTACAAAAAGACCAATGAGAA
TTTCCTCTACAAAGACAATCTTCATCCGGGAAATATAAAATCGTACGTTT
TAAGCTACGATCAAGATCAAGGGATACGACTCAATATTGATGTCCCAGAA
GGCGCTGTTGATATTTATCTCACCGATAACGAACATGTTTTCAGAGCAAC
GTTAAATGAAAATGGTACACAAAACCTGTTTTACAACGACAATGAAAAGC
CGACTCCCGAGTATACAGCTGATGAAGATATATCGGCGATACTTCTCGGT
AACCAACTAATCACTTTTAAGAGATACCAGAAAGGAGTTTTAGCTATGAA
GAATATGCAACACCGCGCCATAATTACTATAGACCCAAAAGATAAACATT
TGCGGAGAGTTCAGTTTTACGTAGTGATTAAGAAGAGCGACGATTCAAGA
CCCATAGCAAAAACAACATTGTATTATGACCAGGGAATGTTGGCCCTAGA
CATGAAGCTACTCTTTGTTGGCCTCCTAATGAGCGCTTTAACGCTGGTTG
TTGAGCTAACTTTAGTGTTCCGATTAAGGAGCGAGTATATGAATAACCTG
AACAACGAGCTGAATAATACACATCTAAAGGAGCTTGAAAATAGACCTAT
GCTTCAATACATATTTGATGCACCACCGTTGAGTTTTCAGCACGAGAGAA
GAGACTTAAGAGTATTACCGGTAGCGGTACAACAAACAGCATTTGATGAT
GATGTTGCATTTTTTTCAGTACTGGTTCAACTACCAGGTTATCAAAACTC
GAAATGTGATATCACTTTTGGTACTGGGATTTTCCTTTTGAAAAGTGAGA
CTAAAGATTCGAAAAGAATTGAACCTATTAAACGAACCACGACAGAAGAG
TACGATCTAGAACATATTAATTACGGGCACAATATAGCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000076_pilon | genome | sc0000076_pilon:513941..519229 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 706-1671:967 |
| Aaloc | 580-705:2385 |
| Aaloc | 439-576:3118 |
| Aaloc | 256-438:3718 |
| Aaloc | 1-255:5290 |
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