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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000055_pilon:1184973..1194500+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036254 ID=XLOC_036254|Name=XLOC_036254|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9528bp|location=Sequence derived from alignment at sc0000055_pilon:1184973..1194500+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTCGTATGAGAAGATTGAGAAAACTGAAAAGTTGCGACCCTTTCAA
TAAACAGAACATCAATGCATCACGAGATAAAGTGAACGACAAGTAAGTAT
AATTATAACCTCTGTTTTAAGCATCTGAACTAAGATTTACCCCGGGGCCA
ACCCTTAGAATCCATTAGTTTCTTACATGGGAAGCCACGGCATGCTATTG
GTTCGAAATTAGATAggattttgtaacttttttcagAGGAGGGCGCGAAT
CAGTCATGGtaaaagttttaatttcaaaaaaactgaagtTACAATAGAAG
CAAAACTCCTAACCCCTAAAACGAGTGAATAATTGAcaatttttagaatt
aaaacTCAACGAAAATGATTACCATTTTCGGataaagcatgaaattctgC
GCAAAAAAGTGTACTACAACATGACGAACACACATATAATTATATGttca
ttcaaagtttgaaatctTGTGAATTCTTTTACGTTAAAGAAAAAGCTCTT
AAAttccttatctgatattccgatggtgtattgtcggccgcccacgctaa
agctctgaaggagcgggtCAATATcaccatcggagacctatagtagtcat
cgtttgatgtaccgcatcacagtcgtgtctagctgtccttacactttttg
cttgactatcggttgcacccgactgaatttagcatgaaaatctctggctg
cctgagaaaccttgcagaaaaatgaaaaatggtaacccaaaggttccaga
tgttaaaattttcccgaccttcagagctttagcgtgccggaagaaaattt
ctacatcgagtaccagataattAAATTCCATGCTCTATCCGATAGTATCA
ATCATTTATGCCAAATTTCTCCTTACTATGAATCAAGAATGCTAAATTTG
GTTTACGCCGGCATTTTTGTAATGTAACGGCGATTGGTGTCAATCAATGT
TGTAAGCGCAAAATTTAGATAGATACGAAACTGATATAATTTTGGACaaa
caatgggcttttccagaaaaaaaattacccttactgttgaggatattgat
ttttcgaagtatcgcaCCCCCtgaaaaatatgctcaaccccctggatatc
atcTCTTataagatgcttacccctggatatcgtattttttacttgaaaag
acattttaccccctggatatccggtTCCTTCTAGATATTTAACACCCTGG
ATATCcaggatatccgatatcctcaacggAGTATCGGCACTTAATATTTC
TAGAAAAgcccatttttgttttgctcgGATCGACCACATATCTTATTATA
TAAAAACACTAGATTGAGCTACCCTACCTTATCCCAAGCAACGGCATGTG
AAGCAAAATAgtccgccatctttgctgaaagtaggtcacagtagAAACCT
TTTGTTTTCACTATTAAAATTATttgacactgcaatgacttcaaaatttc
aaggatctcgcaagctaaattatgacgtcacttcATCCAATTATTTTGCC
TCAAATAGGGTTGAGGGTAGGAAAAGCTCTATCTACTGTTTTATATGAGA
TATATCTGAGATGGACATGGATGTATAATGGtttttttGTGACATGGATG
AATTCGAACCCGTAAAGATAATGAACGATTCTTTCCTTTCCAGGTACGAC
AAACCACCATCCAAAGCTGAGTTAAAGGACGACAATTTTGGAGACTCTGT
AACAGAATTTCAACGCTTTCAACAGTTTGTTGAATTAGGTGCATCCaagc
aaaacataaaaaataagaaaaaaagtgtttcttCAGTGACAGGTTTGgta
taaaaaaatgcttttttagtaatttttgttttgaattttttttttagaag
tatgtattttgaataaagaaaagCGCCACACTCTAGGAAGCCCAACACCT
TGCAAATTAAATGCGGACCTCAGGCGCTCATTTTAGAAATCACTATTAGG
GGTAACAGTGTCCTCTTCCTTAGCATATGTcaaattttaataatctacat
taaataaaaaatctcaatttttgccaaaaatctcaaaaatgtttCTGCGA
TGAATTTCCACAGAAAAGAACAGGAAAATAGCACAAATAGAAGTCTTGGG
TTGTATTTGTATGTTTCAAACTCGAGAGAAGAAAATTTGTTGgatttttg
ttaatatttgtTAAATATCCCAAAACTGCAAAATAAAATTCCCACTATCT
TTTTTCAAGCCATTTGCTAAATTAATCctctctaaaaaactttttccgcc
atccgccaaatcaaggaatgggctattccaaaaatagTCTATTCcgccta
tgttgaggaggtgtgacgtcaagagtggtctgaaaaataaaaaatccagg
gtggtcttaaaaacgaggtggaaaatccagggtggtccaaaaatgagaaa
aaaatccaagcgagtcctgaaaatcgggaaaaaaatccagggggtcactT
CAACATAggggggtacaaattttttcaatgcttaTTTCTTTACatacctt
atcagccctttCTACGCAGGTCCCTTTTGCGACATcccttattacgccaa
agctgaattgttttttttttctggcttGGCACTTATTTGAGTCCGATCCC
TTGCGACGGCGCTCAAGGGCCTACGTAAAAGGGACAGATAAGGTAACATT
TTTCACAACAACACTTTATCTACACagaaaagaagagtaaaggaaaagca
aaagaaaagatttcgaaagTGGTTGAGAACTGTCAGCAACAACCTGGTGA
AACAAAGAAAGACATGTTCCGAAGGCTGGATCAAAATATCCACAATGCAA
TGACTGAAGctatcaaagaagaaaaagttgtCCGCAAGAAACGAAAAGAG
TAACCTTACTGGCttgcaacgttgtttcaacatccatctaatgttcacaa
cgtccatataacgttagatgggcgttgaaacaacgttgtgtgccagctga
gaaGATCTTTGTCAGATCTTTTGTCAACTTTATTTTCTCCAATAAAGATG
GACATATTTTTTGAAGTACAGCTTGTGAGAgggaaaaataaagcttaaaT
GAATACCTTTTATGTGGATTagttaaaaatatgaaaatgataaaaactaC
TTTTACTTTCCAATGGTTTGACTGCCGTTTTCTTGGAACAGTTTTTAATC
AGTTTAATTTTCACAAGAATTAATTGCATGAGGCAAAAAAGTCGCGGATT
TATTTTCTCAAATCggcaatttcaaaattttagcttggatttaatttcgc
aaatcagCCAAATAAgagttggaaaaaaattatcgtcaaaaatataaatt
gccAGTGTATGGTATGCGGAAAgtctgtttgaaaaaaatttggtgttttt
tgcgagatttattttcgcgaaaaacagGTAACAtcttgcgaaaattaatc
cgattaaagtatagATTAATGTATCTTTTGAAGGGATTGAGAAATTTGTt
cgttgtatttttttttcagaatagtTTGTTTTGCGTTTCCTTCTAAATTC
TTTCGCTGATTTTCGTTTTCAGGCATTTGAAGGCGCGAGACGAGAAACgt
aagaacaaaggaaaacaaGTCAACCAAACATCTAGTGATGGGATGAAAGA
TTTCTCCTCCTTGAGTGGTAAaatatatgttcttatataaagcTCCTTAA
TAAATAATTCTGTACTTGTTATGATTCTGGCATTCCTATAATTTAAAAAA
CACGGACGTTTAGAAATCATTTTCGGAGGTGCTTTCCTAATAATGAAAGG
aaacaaattattttaaatatCGTTGGCACCCATAGTCTATCCGCACTTAT
TGCCGACCCAacaaaatatcagcgttttgattggtcgagagcatcgagat
atttgcgatatttcatatttctctagtatggaaatatgaccgcgttgact
tttgggggactgggtaagcggcgggagaaaaatcaaaacaaaaaatgccg
aaaacaggaaaaGaactagcctgttagacgaaaaccgcttttttatctcg
ataaaacaaagacaggggggggtcaacatccagataccagacccatagcc
gggtggtggtgtctttttttcctttaaaagtctgaaaagtcaagttggta
ttgatgggggtgggtccccctttttttagAaaaaaagagttatcctcagt
tggtattgataccaaaatagggggtgggtacccctttttttaaataatat
gattcagaaagttggtatccatatcaaaatgacagcaaaactttcctaat
tttgcccttatagctagaaaataccccggggtacatatcagtgtaaacag
gtttcaattggatttgttttagctttcgagtataatgactgtaaatgagt
aataagtataaatgactttgaagtttgtttattttggactttttcgatat
tttcaagttttatttttgatcaagcctgaagcaaaaacattttttctgtg
atagcatttggtaatgaatctattctgttctaaaattatgtactaataat
agcttctcctagtttttgcacatcaattatattcagataatattgattca
gattgattttgctagcttcattgggtttgtttttatcatattgtcagttt
tcagtcattttctattttagcatatgacattttttgtgttgtgttgaaga
aagagtatttcaaaaatgagtttttttgaagtttctcttagtaccctgtt
tgtgtgggagggggtgggtcccctttaaacagctttaaactcaaatttgt
cagattggtattggtactaaattagggggtgggtcccatgatattttgtc
aaattcaaaaagtcatgttggtatcgataccaaattaagggggtgggtcc
cccctttttctgaaaattatgattttcaagttggtatcgataccaaaata
agggggtgggtccccctttttctgaaaattacgatttttcaagttggtat
cgataccaattttggggtggtggtgttaacttagctcaaaaggtcaaaag
tcaggtttttgggctatgggttggtattataaatgttgacccccccctga
cAAAGAAacaatttggtttgtgggaaggtactggctagaaaagaactgac
tttcggagaaactaacttgggagtcaaagggaaaaacgcaacaaatatat
tttcagattaacttttactttggagtacttccataaaagacactaaaatc
aaatctgatgaactataagaaattataaaactgcTTGAGACCACCTAAac
tttttcagcttttggtataaaattcgtccgtgtaataaccaaacagtttt
ttatcaatgtatacaaaaaaacttgagattcttgaatgtttgccaataag
atttctcataacatagcaagggaagtgaaatgtcttgtattaaaccaaat
gacgagtgatttttataaaagttctctcctaattctcgttctcgacgagg
tacgtccttgtttgaattttcaactcaacaatcattacatcttccttcta
aaattcgaaacatttaaagcttgacgataatcaagaaagtatccaaattg
ttttgctcttgaaaaaatgttgttctttaaccattattacaagcatacat
ttccatcatggaactcctttcctgtgctattcttttccatgcatcaaaac
aaaaacatagaaaaagactgaatgttatcaatctgattaatccaatgatg
aagggtttcttctctatcgaaagtacaccatctgcattttgaattatcaa
tctagaaactttcaaatacatctctgaaaaatctgcaactcttcaaaaca
aaacttctggatcgaaaatgatcaaaaatgcTTCTATGTTTAATTTGTTT
TCGTGTCAATATTTTCGGCGGGAACATATCGAATGTTTTaatgttcgaat
ctaacgttcgaattagattttcgaataaaaacattcgaaactacacagaa
gaaagaagcaaggcggaagtaagttttaaaataaaaacaaaaataaattt
atatcaggacaatttttttgagtcgacaataaattagttatcacatgact
tctcgtgcaatactcgatattttactcgttccgagattttaccgatattt
ttcctcgcctaaaggctcggaaaaatattacggaaaaatctcggaactcg
taaaatatttctcgtattgcactcgaagtcatgcgataactagtaccaAT
TTAGAGGAAAATTGATAGAATAAGTGACGAGAATAATGATaacactttta
ttttttgtgtcTGCTGTATCCACAGCGGTGTACGGGTAATGCATGACGGG
TGCTAAAAGGGGGTCTATCTATCCTGCACTACtaaaaacagacaaaaaga
acgacaaatttcataaggaacgataaaaaagaacgacaaatttcatattt
agccgtccacaaccccgaccgaaagtgactgtatcacccctttttggacc
taccccggtgggctgtaggtcctataaattaacctctgttcgttcgttcg
tccgttcgtccgttcgttactagcttttctcgggattggctcattagttt
ttcctaatttttggcacaaagatgcaaaatggtaatgcccaaaatgtgac
ggagcccgattttcgaaaaaaattcatttccggccgaaaatgccggaaat
atgccggaaaaaccggttttttggcattttctcgagatttcatcattagt
tttttctgattttttgcacaaagatgcgtattagcaatgcctaaaacatg
gccgagtccgatttttgagaaaaattctattccggctgaaaatgccggaa
atatcccggaaatcgccgtttttgcagattttcattggactttttcctta
tatttcgttgttttttcacacaaaaacattatttgtagcaatgcccacca
tcaagcatggtttaattgtcaataaaagtgatttttgaagccggaacttt
ctaaaaatcgccggaacagcctattttcgccggaaaacggtatttcttga
atttctcgagctgtactttatattttttcatgaaattttgcacactgatg
caaaatggcaatacctaaaatatgacagagactgattttcaattaacgta
cttttccggccgaaaatgccggaaatatgccggaaaaaccgtttttttgg
cattttctcgagatttcatcattagttttttctgattttttgcacaaaga
tgcgtattaacaatgtctaaaacatggcctagtccgatttttgagaaaaa
ttctattccggctgaaaatgccggaaatatcccggaaatcgccgtttttg
cagattttcatcggactttttccttatatttcgttgttttttcacacaaa
aacattattgatagcaatgcccaccatcaagcatggtttaattgtcaata
aaagtgatttttgaagccggaactttctaaaaatcgccggaacagcctat
tttcgccggaaaaacggtatttcttgaatttctcgagctgtactttatat
ttttttcatgaaattttgcacatgcaaaatgacaatacctaaaatgtgac
ggagcccgattttcgaaaaatattttttcccggctgaaaatgccagaaat
atgccggaaaaccgtttttttttacattttctcgaattttcatctttagc
tttttctgattttttgtagaaagatgcgtatttgcaatgctcaaaacatg
gccgagttcgatttttgagaaaaaaattttcccggttgaaaatgccggaa
atcgccgtctttgcagattttcattatatgttttccttgtatttctatgt
tcttcacacaaaaacattattgataacaatgctcacaatcaagcatgatt
caattgtcaataaaactgatttttgcgaccagaactttctattaatttta
ccctacaacccttccctctccccccatcaacaatcaatgatgaatttatt
gcgttatgcattttcgctaaacgatatattttctgactgatttttttctc
ctcgcattgctatctaactttcatcatcaggtaggtccattcagcatcta
gcttgtttttaataatttctcattgtttatcacgggaattaacaacgtga
tttaaaagaacgacaaattacacTTGCGTGTTATTAATGCTGGAATTGCA
AGACGAACCTACTGCTAATTCCGCATaaaattgaggaaaactttgaaaat
gatgttaaaaattgaatataaaaaagGGAAGATTTTCTAATAGAGTCCTA
GCATCATTTATTAGCTTGCTAGAAATGTTCAAGAAAAGAAGTGTCGTTCT
ACTAGCTTTTCCCCGATTTTGTATCCatgaatctttttgtttttttatgg
tctttctttttcagataaaGTGAAATTCGGCGAGCGAGTTGATGAACCTC
CAACCATCACTTCAGCACCACGAAAAGCCTCATTGAAGGTCAGTCAGACC
CCGTTTGGACACCATGACCATAGAGTAGAATCTCTTCCGTTCTCagtcaa
gaaaaagtgaaagcacttatttcccatccagaacgcgccgcaatcatgac
gatgGATTGTATCTtgtagtggttcctttgtttttgaggactgcagtatt
tgaaatctagcgatagattttactttcaattcgATGTTTGTGTGAAagcc
acgcgcgggcgttctggatgggaaattaagtagcttcatttcccatctag
actgaactttgctttttgataatttttgatgacgctgagtccagtgaagt
agactagaagcatttggcgaggtcgccattttaaaatccaaataacaaaa
aaactatttggagttgaaagatgtaatcaaaaatgagaaacaaacatcaa
taacagatttgcaatctcttattctcaaataaaaacattgctttctactg
tttttacctttcaaaaacaacaaaaatctggtggactgttttacagtccg
cctaagcaaaagcatattaccttatactaccgggccacttaatcgcgcca
tccagtctattaAAAAGCTtcaagtggaccccgggctatttcccatccaa
aagtttctactctagctctttcggggctttaaacttaaTTACCGTGACTC
TAcagcaaatatttttttcatttcccttttttaaattttaaggtcttctt
tttcTGCTGACAGTCGTTGATGGCTGAACTGGGAGGGCGTACatctattt
ttgaaattgaaaaggaaTTACGTCTAGTTTGTATTGTGTAGTGAAAGTGA
CGTTTCTGTAGTTATATTcctcttttaaactttttcccGATGCGATATTT
TCTTTCCAGACTCAACCAAAAACATTACAACTTCATTCGTTATTTAACAA
AGCCGATAATGACGAAAAAGAACCGCCGACCAAATCCGACACCTCATCAA
AAACAACGACTAAAAAACGACGACGTGAAATGAACGAGAAGGAGAAAGCC
TCTTTTGATAACGAAAGACAAAAAGCAATCGATGCTTATCGGTTAGCCAA
AAAACGAAGAGAGATGAAAAACACTTGA Coding sequence (CDS) from alignment at sc0000055_pilon:1184973..1194500+ >XLOC_036254 ID=XLOC_036254|Name=XLOC_036254|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1602bp|location=Sequence derived from alignment at sc0000055_pilon:1184973..1194500+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGTCGTATGAGAAGATTGAGAAAACTGAAAAGTTGCGACCCTTTCAA
TAAACAGAACATCAATGCATCACGAGATAAAGTGAACGACAAATGGGTCG
TATGAGAAGATTGAGAAAACTGAAAAGTTGCGACCCTTTCAATAAACAGA
ACATCAATGCATCACGAGATAAAGTGAACGACAAGTACGACAAACCACCA
TCCAAAGCTGAGTTAAAGGACGACAATTTTGGAGACTCTGTAACAGAATT
TCAACGCTTTCAACAGTTTGTTGAATTAGGTGCATCCaagcaaaacataa
aaaataagaaaaaaagtgtttcttCAGTGACAGGTACGACAAACCACCAT
CCAAAGCTGAGTTAAAGGACGACAATTTTGGAGACTCTGTAACAGAATTT
CAACGCTTTCAACAGTTTGTTGAATTAGGTGCATCCaagcaaaacataaa
aaataagaaaaaaagtgtttcttCAGTGACAGaaaagaagagtaaaggaa
aagcaaaagaaaagatttcgaaagTGGTTGAGAACTGTCAGCAACAACCT
GGTGAAACAAAGAAAGACATGTTCCGAAGGCTGGATCAAAATATCCACAA
TGCAATGACTGAAGctatcaaagaagaaaaagttgtCCGCAAGAAACGAA
AAGAaaaagaagagtaaaggaaaagcaaaagaaaagatttcgaaagTGGT
TGAGAACTGTCAGCAACAACCTGGTGAAACAAAGAAAGACATGTTCCGAA
GGCTGGATCAAAATATCCACAATGCAATGACTGAAGctatcaaagaagaa
aaagttgtCCGCAAGAAACGAAAAGAGCATTTGAAGGCGCGAGACGAGAA
ACgtaagaacaaaggaaaacaaGTCAACCAAACATCTAGTGATGGGATGA
AAGATTTCTCCTCCTTGAGTGGCATTTGAAGGCGCGAGACGAGAAACgta
agaacaaaggaaaacaaGTCAACCAAACATCTAGTGATGGGATGAAAGAT
TTCTCCTCCTTGAGTGataaaGTGAAATTCGGCGAGCGAGTTGATGAACC
TCCAACCATCACTTCAGCACCACGAAAAGCCTCATTGAAGataaaGTGAA
ATTCGGCGAGCGAGTTGATGAACCTCCAACCATCACTTCAGCACCACGAA
AAGCCTCATTGAAGACTCAACCAAAAACATTACAACTTCATTCGTTATTT
AACAAAGCCGATAATGACGAAAAAGAACCGCCGACCAAATCCGACACCTC
ATCAAAAACAACGACTAAAAAACGACGACGTGAAATGAACGAGAAGGAGA
AAGCCTCTTTTGATAACGAAAGACAAAAAGCAATCGATGCTTATCGGTTA
GCCAAAAAACGAAGAGAGATGAAAAACACTTGAACTCAACCAAAAACATT
ACAACTTCATTCGTTATTTAACAAAGCCGATAATGACGAAAAAGAACCGC
CGACCAAATCCGACACCTCATCAAAAACAACGACTAAAAAACGACGACGT
GAAATGAACGAGAAGGAGAAAGCCTCTTTTGATAACGAAAGACAAAAAGC
AATCGATGCTTATCGGTTAGCCAAAAAACGAAGAGAGATGAAAAACACTT
GA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000055_pilon | genome | sc0000055_pilon:1184973..1194500 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 583-801:9310 |
| Aaloc | 511-582:8367 |
| Aaloc | 415-507:3524 |
| Aaloc | 244-411:2680 |
| Aaloc | 94-240:1645 |
| Aaloc | 1-90:1 |
|
