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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000135_pilon:36743..38940- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036137 ID=XLOC_036137|Name=XLOC_036137|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2198bp|location=Sequence derived from alignment at sc0000135_pilon:36743..38940- (Clytia hemisphaerica_ch_hm2_pilon)
TCATTATGTCAATATTTGGTGGATCCTTTGTTTACGTCATCAGCTCTTCT
CAATTATCGGATTCTTCACCTGGCATATATTGGTCTTGCCATCGTCACAA
TAGCTGTCAATGTTTCAGTATTATACACATTTTACAAGCTATCCTACTAT
AATACCATCTACCACAGGTAAATATCTAAGAGAACAGACTTTTGGTGAAC
ACTCTTTAAAATAAATTCTCTCCAATAGACCCTTTCATAAATTGCGTCAC
GAACATCACTTGCCTCGTTTTGAAATTATTGCCATGGTGATTAACTCCCA
GTGGATTTTATTAAAATTACTTTCTATTCGTAAAGGGACATAATCACCTT
GGTAATTGCTTAAACGAGGCAAGTGATCTCCGTGACGTAATTTATGAAAA
GGTCTATGGTGTTGTAAAAATCTTTTCAAAATGACACCTAATTTTTTGTT
TAAAACAAATATTTCGGAAGAATATCGTATTACTTCGAATAAACGCCCCA
TTCCTTTGAACGCCCCCCTCGAATAAACGCCCCTCCTAAAAGGAAAATTA
TCTGATAAACGCCCGTTCAAATAAATGCCTCCTTTGAATGAACGCCCCCT
CTAGGGGAGGAGCGTTTATAAGAAACTGGTGATTTGAATACTTCAATAAC
AGTGTTGATTGGGCTTGAAAAGGAAGATTTTAGTCATTTCTTGTAACCAG
AGCTGTTTTCGATGCAATTTTAATCGTTGAACCAAAGAAATTTTGCACTA
AAATCCTGATAAAGAACTAAAACAGGTATATTTGCTCTAAATATTCGACT
TTAGACTAAAATAATTCAATAAACGCCCCCTTCTTTTAAACGGAACATGT
AAGGGTGTAAAAAGTGAAAAAGAGTGAGGAAGATCTGACAATTTTTATCT
TAAAATTCACCGTTAAGGTCGAGTTTTTGCGTGAATTTCCTCATAATGGT
CAAACTTGCTCTGCAAGGGTCAAACTTTGAGACCCGACTTTTTGTTTCTG
CATAGTTTTGAGATCGAGCTAGAAAAATTAGCTCCTTTTGATGTATTCAA
CAGACAAACTTATTTTCCGCCCTTAGCTCTATACTAGGTATATAAATGCA
TGGGGTAGGTTTGCGATTCAAGGGGTACACTCCACCCGACAAACAGCCTT
TTGACCCTTACAACGAAAAGCGCCAAAACCTTTTGAGCAAATTTGTCCCT
TAAGATTAACAGGTGAGTCCTGAAATTTATTTCCAAACTTTTCTAACACT
TTACAGACGGAACCAGGGACTCAAAGCCCAAAAAGACCTGTCCCCCTAAA
TAGTGCTTTCAGTATATCAGTAAAAGCGACGGTCTTTAACGAACATATCA
ATATCGCGAAAATATGTCTGTACTGACGATGGCGTAGCCGAAAAGCTTTT
ACCGAAACAAAATTTTGAGATTTTTTAGCAAGAGTTTATTTAACAAAATC
AAAATATTTTTATCTTTTAGATCTCTGATTGTGCTTTTGTTGACCGACAT
ATTAACCTGCGTGTCGCTACTCCCATCATTCAGCTACTATGCATTTCAGC
TGGCCAATGGAAAAGAAGATTGCTTAACGGCAGACCTCGTTCGCTTGATT
GCATCCTGTACAGTTACCATGGCGATGTCCACTATAATCCTCATCAATAT
AAACCAATACGTAGAAGTGCTTCGCCCGTTCATACGTGTTCACTACTATT
TTTGGAGGATCACAATGGCACTGTGTTCTTTTTGGATAAATTATTATTTC
GATACTTGTTTTTCTAGTCTTACCTAAGAATGTTTATTCAAAGTATTTGT
CATGCTTTGCTGTTGTAACTATCATAGTCTTTGTGGCGTTGGGTTTTATG
TAGTATCATATTAATCGTGAAACTAGAAGAATTGTAAGCCGAACTGCTGC
CCAAACTGGTGATATAGAGAGCACAAGAATCATTACGCGTATAAGTCGGA
TGTCACAATCTATACTGTTTGCATTCGGTATTTGTTATTCTCCAGTCGGT
GTTGTCCTGTTATTGACATTAATATATGAATCGGAAAGAGCCTTCATTGC
TACTTATATACGACTGTGGTACCTATTCATTGGGAATATGAATCCATTAC
TTGATCCAATCATCTACTGTATCAGAATGAGATCGGTACCTCGCTATATC
TTTCGATTTTTTCGCCGTTGCAGAGCTAACCGTGTGGGCGTGGTTGAC Coding sequence (CDS) from alignment at sc0000135_pilon:36743..38940- >XLOC_036137 ID=XLOC_036137|Name=XLOC_036137|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1790bp|location=Sequence derived from alignment at sc0000135_pilon:36743..38940- (Clytia hemisphaerica_ch_hm2_pilon)
TCATTATGTCAATATTTGGTGGATCCTTTGTTTACGTCATCAGCTCTTCT
CAATTATCGGATTCTTCACCTGGCATATATTGGTCTTGCCATCGTCACAA
TAGCTGTCAATGTTTCAGTATTATACACATTTTACAAGCTATCCTACTAT
AATACCATCTACCACAGTCATTATGTCAATATTTGGTGGATCCTTTGTTT
ACGTCATCAGCTCTTCTCAATTATCGGATTCTTCACCTGGCATATATTGG
TCTTGCCATCGTCACAATAGCTGTCAATGTTTCAGTATTATACACATTTT
ACAAGCTATCCTACTATAATACCATCTACCACAGATCTCTGATTGTGCTT
TTGTTGACCGACATATTAACCTGCGTGTCGCTACTCCCATCATTCAGCTA
CTATGCATTTCAGCTGGCCAATGGAAAAGAAGATTGCTTAACGGCAGACC
TCGTTCGCTTGATTGCATCCTGTACAGTTACCATGGCGATGTCCACTATA
ATCCTCATCAATATAAACCAATACGTAGAAGTGCTTCGCCCGTTCATACG
TGTTCACTACTATTTTTGGAGGATCACAATGGCACTGTGTTCTTTTTGGA
TAAATTATTATTTCGATACTTGTTTTTCTAGTCTTACCTAAGAATGTTTA
TTCAAAGTATTTGTCATGCTTTGCTGTTGTAACTATCATAGTCTTTGTGG
CGTTGGGTTTTATGTAGTATCATATTAATCGTGAAACTAGAAGAATTGTA
AGCCGAACTGCTGCCCAAACTGGTGATATAGAGAGCACAAGAATCATTAC
GCGTATAAGTCGGATGTCACAATCTATACTGTTTGCATTCGGTATTTGTT
ATTCTCCAGTCGGTGTTGTCCTGTTATTGACATTAATATATGAATCGGAA
AGAGCCTTCATTGCTACTTATATACGACTGTGGTACCTATTCATTGGGAA
TATGAATCCATTACTTGATCCAATCATCTACTGTATCAGAATGAGATCGG
TACCTCGCTATATCTTTCGATTTTTTCGCCGTTGCAGAGCTAACCGTGTG
GGCGTGGTTGACATCTCTGATTGTGCTTTTGTTGACCGACATATTAACCT
GCGTGTCGCTACTCCCATCATTCAGCTACTATGCATTTCAGCTGGCCAAT
GGAAAAGAAGATTGCTTAACGGCAGACCTCGTTCGCTTGATTGCATCCTG
TACAGTTACCATGGCGATGTCCACTATAATCCTCATCAATATAAACCAAT
ACGTAGAAGTGCTTCGCCCGTTCATACGTGTTCACTACTATTTTTGGAGG
ATCACAATGGCACTGTGTTCTTTTTGGATAAATTATTATTTCGATACTTG
TTTTTCTAGTCTTACCTAAGAATGTTTATTCAAAGTATTTGTCATGCTTT
GCTGTTGTAACTATCATAGTCTTTGTGGCGTTGGGTTTTATGTAGTATCA
TATTAATCGTGAAACTAGAAGAATTGTAAGCCGAACTGCTGCCCAAACTG
GTGATATAGAGAGCACAAGAATCATTACGCGTATAAGTCGGATGTCACAA
TCTATACTGTTTGCATTCGGTATTTGTTATTCTCCAGTCGGTGTTGTCCT
GTTATTGACATTAATATATGAATCGGAAAGAGCCTTCATTGCTACTTATA
TACGACTGTGGTACCTATTCATTGGGAATATGAATCCATTACTTGATCCA
ATCATCTACTGTATCAGAATGAGATCGGTACCTCGCTATATCTTTCGATT
TTTTCGCCGTTGCAGAGCTAACCGTGTGGGCGTGGTTGAC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000135_pilon | genome | sc0000135_pilon:36743..38940 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 457-900:445 |
| Aaloc | 442-450:454 |
| Aaloc | 169-441:728 |
| Aaloc | 1-165:2199 |
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