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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000038_pilon:1647658..1652578- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_036134 ID=XLOC_036134|Name=XLOC_036134|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4921bp|location=Sequence derived from alignment at sc0000038_pilon:1647658..1652578- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGACTTTGATAAGCCTAAGCCAAGTGATAAAGACATCCAGAATTT
GAAAGTTGAGAATCAGACGTTATGTGATCAGATCAGTATATTGAAGTTAA
AGTGTAAAACATTCGAAAGTGAAACCAAGAACTCAATGGAAAGATTCTCC
TGCTTGAAACACCTGGTCAAGAGGTAAAAAGTTTTTTTGTTTGTCATGCA
ACAAATAAAAAACTGAAAATATTACTCCGTGACCATGATTTTTGGTGAAA
TCTTCTAATATACAATGAATTAACCCAAGAAAAAGGTAACGAAAAACGAA
AGCAATGTTTTAAAAATAACTCTCCAGCATGGATCGGCTTTTCATTTTAG
GTCGTTAAACTTTAGTATTCAAAATCCTTTAATCAAATTTTGTATGGACT
ACCTATAGTAAATATCGTCTTCTTAAATTCTTATTTTGTTGCATGACATC
CACAGAGCATGGTGTGGAGATCACGAAGCTTCCAAACACGTAGCTAACAT
CGTTGGTAAGATATTTTCTTTATAATTTTTGAAAAAAATAAAATGTTTGT
CCGTGGATTTTATTAGTAAATTGGCAGGAATGTTGGGCCATCTTTCAGAG
CGATCATGATATTATTTGAAAAATTTTTCTTCTGGGCCAGATTGTTCTCA
AAAAAAAAAGAAAAGACGAAAAACAAAATTTTGTTCATTCTTGACGTTTC
GATACTTCTTGTATCATGATCACAAGCAAATAGTTAGCTTACAAGCAAAA
ACGTGTTGAAAAAACAAAATTTCAAATTCATGATATTATTCTCATATTTT
TCAAGTATTGACTATGCACATTATTATGGTTATTGGAACTGTTCAAAAAT
GATTTCTTCTCTTTTCAGGGGTGGCACCACCATTGTTCATTTATCGACAT
GACGATGAAGAAGTTGTCGCTTTCCCTAAGGTATTTTCATGGTATATATA
CTTAGGTGGTGCAGTACGTCTATTTTTCTATCTTTATATCTGATAATTTA
GCACAGATAATGCCTTGATGTAACTTTTTGGACTAAGCATGTTTCAAGCT
AAAATCGGGCTAAAACCTACTTTTCTACAGAATCTTGTGGATTTGAGGCA
ATTTGAGGTATCATGTTGAATTATGGTGTATGGTCTTAAAATTCAATTGC
TTGAACTGAATTAAGCCTGGTCATAAATTGAAAAGGTGGCATTTTTCGCT
TTAAAATCAAACTTTTTTCGAGTTTTTGTATCATTATCCTTTTCCATCAG
TCAAGGGCCATCAATAATTGGGCATCGTTATCAGCAAGTCTTTTGGAACG
TTACTACAAACAGCGAGAGGATGTCATGTTTTTAAAGAAACGACAATTTC
TGATCGAAAGGGAACATTTTCTCGACTCGCAACTTGATGGTTATATTAAT
GAAATACCGCGTGATCATCCCGTTGATAAAGGACTGGACCTCATTTATGC
TGTCAATAAGGTATTTTCTTACACAGCCGCTATGAGATTTGGTTTGAACA
GTTTATTTCTTCACATGATATTCATGCATATTATGATATGGAAAAAGGAA
TATTTTACACCCAAATTCCTATCGATCAATACTTTTCAATCAAATTTGGT
TATAATATTAATCTTAGCTCGCGACCCCCATCTATGTAAAAGAGGTAGCA
ATGTTTGAAAATTGTAAAAGAAGGCACCGACAGGGATACTTGTCTGCAAA
GTTCTTAGCATCCGTCTCCCTAAATCCTAAGATATTTTTATAAATCGATA
AGCCAAATTAACTCATATCATGCATCTCGTTCAAGTTCAATGCTATCATT
TGGGTCAATTTAAATAATGAGAAATTCCTGATATTACGACCCTATAACAG
TTTGAAAAGTGAGGGGTTCTCGTTGTACGCTGATTTTCAGGGGAATAACA
TCAATTCTTGAAAAAGGAGAGGGATCTCCTCACTACCCTCTTTTGAATCC
CCCCCTGCCAAGAAAAATTGAATACTTTTAATAAAATAAGGTCAATAAAA
CGCTCTAACTACTCTTAGGTACCTAAATAAATGGGGGTTTGGAATAAGCC
AGCTGTTTACCAAAGCAAGTTTAGTAGTGTCGTATAAAATCTTTAGTGTT
TAATTTCGAACTACCTGGTGCATTTCAGAGCAAACCTTTAGTGGAAGTGT
TACAACACACCTCTCGTCCCACCTCACCATGGAAAAGTCGCCCATCTTTC
AAGAAGATGAATGATCAGAAGTCACACGCACGCATGATGGTTTCACCTGT
TCAAAGCATGATGACTTACGGTATGAAAACCATATACATGCACTGCATAT
TTTCCTATACCAAGGTTTATTTAGATGAGTTGTTTTTGTTTGCTTATTCA
TCAATTTTTTAATTTAACCCTTTAAGTGCCGATGTCGTATATATACGACA
TGGGCTATATAGGAGGGCGAAGCCCTCCTGTAATGCCCAGTTTGAGTTAG
AAATCGTTATTTTTGGTCGAACTCGTAGGAATTAGATTGTCCTTTATGGT
CAAGCAAAAAAAAATTCAAAAGTGAGTCTTTCCAGCGAAATTTTAAGCAA
AAAAGTCAAAAAAATGCAAAAAATTGACAAAAATTCACTTTTTTGAGATT
CTGACCGTTTTTTGACTATTTTTGGTCAACGAGTGATCCAAGAACCTCCA
AATTTGGCCCTGTTTTACTTTATTCTGTCTTCTAGTGAATTGATTTGAAA
TTTTACCACTGGGCACCTTTTCATCAGTTCAGTCAGGTCCGCGCAGCGGG
CCTGACTGCTTTAATTCCCTAACCTACCCCCCCCCTTGGCCGCCGCCCAC
CACGCCCTTCCTAAATCGGGCGGCGCCGAAGGCGCCCAAAAGAAAGAAGA
GACTCTAAGCTATCCAACGAGCTATATACGAGCTTCTAATTCCTTCTAGA
TCAGGAGATATAAGCCCTTAAAGTTTGAACTAGCGATTTTTTAAAAAAAA
CTTAGAAAAAAGGACCCTGGCACTCAAAGGGTTAAAAGAGTGGGCTATTG
TCAAATCAATCTAAATTAAATTTCAATTATCAAGTCAGGTTTTAACATCA
TACTCGGGTTATCCCTAATTTCAGATAAATTGGTTAAAAAAAAATTTCAA
GATTTCGAGACGAGAAGATAAACCATCTAACGCAAAAATTAAAAAAATAA
GGTCTTCAAAGGTTCAAATACTCTTCTTTGCAAAAGTTTTCATTTTCTTC
TTTGTCAAATTTTATCATTACGATTTTTAAATTTTTCAGATTAAGAAATA
GTTGGCCTACTACAGAAAATGTATAACATATCATCCGTTTGATATTTCTC
TACAGGGGAGAGTGGAGATGCAGAACTACAAATCGATTCCAATAACAACA
TATTGCCCATCGATTCCTTCAATATACAAAACGAAAATCCAAATGAGGTA
GCTCTTAAGCTTAGTAACCCACGGTTCTAAACTCTTTGGATTGTTATTCA
AATTACTTCTTTGTAGAAAATAGATGGATCGATTTCATACTCAAATTATA
AACCAACTGTATTAACACAAGTTTAACCTTTTTATTTGAAGGTGTCACCA
CCTACTACTTGTACCCTAACATCACCAGCGAAACTTCCATCTTCTAGAAC
AAGACCATCGTCTGCTTATCGTCCCGCAACTGCAGGTCCTTCAATAAATA
CAAGAGAAAAATCGAACCCTACCGTAAAAACTGAACGATCAAGGCCTGGC
AGTGCTTCAACGTCGGTAAGTACAACCTTGTAATATACAAAAACCCTTGT
CTGTATTCTTGTTTATACTTGGGTCTTTATTTTGAAAACTCTTATTGATA
ACATTCATTTCTTTGCCCTAACTTTTATAAAATTTTGATTTTAATTGTCA
TTTTCATCTCCTCCACAGCGTACATCACAAAAGAGGAGCACAAAAAGTGC
AATGGGAAGCTTAAAACGTGACCTCGGGAATGTCAAAGCAGGTGAGTCAC
CCCTCATCCCGACACACTACATCACATAAATCGTAGTTATTTTTAGGTCT
GGACACTTCCCCTCCATGTTTGTAAAAATGTATGAGTACATGTACGTTCT
TAGGTGCCAAATAATCGCTTGTTAATTTTTCGAAAATTTTCCAACCCCCC
GGACATTATTAAGACTCCCCCCCTCGTTTATTAATTTTTAAGAATATTTT
CAGTTAGCAAGAAGAAGTCGCCTTATTTTTCTCCAAAAACCTGATTTTTA
AAGTACAATCTCCAACCCCCTGCAATTAAGTAGGTCCCCACTGTTTATTA
AAATTTCGAAAATTTTCCAACCCCGTTTAATCAAACTCTCCCCCCCCCCA
TTTATTTGGCACCTAAGAGTACTTGCTTGTTGCTGCTTTTAACGGAAAAA
TTAGGAATTCATTTAATCTCATAATGTTCTGAGATCATCCATTCTTCTCC
CACAACACTATGCTCTAAAGGGGTATGGTGAATGTAATGAATTGAATTTG
TTCAACAAACATCCTTAAAGCGAAAGCGACTGTGCTCTAATATTTAGAAT
GTACGGATTAACCGGAGTAACCAGGATCTGCTCGAAGATTAGAATTTAGT
CTGCGGAGTTCTTTTAGTTTTCCAGTTCTCCTTTCTACTCTCCCCTTTTT
TCTGAATGTGATTTGTCAATCGGCAATCTTTCTCCCTTGCCATTCTATTT
TATTCAATTAATGATTCCACCACAATAAGTATTCTCTGTTTTACTCATGA
CAGCCTCGCAAAAAGTTGGCAATCATACGAAGCAACGTCCTTTCTCAGCT
CAATGTGTTGGCGTCAAATATTTTACGGCGTCGTTACATGACGTCATTGA
ACCTTGTACATCGGTGTCGATCGAACGTCAACGGCAACTAGATGTGGTGG
AGAAAAGACTTCAAAAAACAACGCAACTTTTACAAAAGAAATTATCCATA
AACCCCTTGAGCTTTGTCTGA Coding sequence (CDS) from alignment at sc0000038_pilon:1647658..1652578- >XLOC_036134 ID=XLOC_036134|Name=XLOC_036134|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2388bp|location=Sequence derived from alignment at sc0000038_pilon:1647658..1652578- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAAGACTTTGATAAGCCTAAGCCAAGTGATAAAGACATCCAGAATTT
GAAAGTTGAGAATCAGACGTTATGTGATCAGATCAGTATATTGAAGTTAA
AGTGTAAAACATTCGAAAGTGAAACCAAGAACTCAATGGAAAGATTCTCC
TGCTTGAAACACCTGGTCAAGAGATGAAAGACTTTGATAAGCCTAAGCCA
AGTGATAAAGACATCCAGAATTTGAAAGTTGAGAATCAGACGTTATGTGA
TCAGATCAGTATATTGAAGTTAAAGTGTAAAACATTCGAAAGTGAAACCA
AGAACTCAATGGAAAGATTCTCCTGCTTGAAACACCTGGTCAAGAGAGCA
TGGTGTGGAGATCACGAAGCTTCCAAACACGTAGCTAACATCGTTGAGCA
TGGTGTGGAGATCACGAAGCTTCCAAACACGTAGCTAACATCGTTGGGGT
GGCACCACCATTGTTCATTTATCGACATGACGATGAAGAAGTTGTCGCTT
TCCCTAAGGGGTGGCACCACCATTGTTCATTTATCGACATGACGATGAAG
AAGTTGTCGCTTTCCCTAAGTCAAGGGCCATCAATAATTGGGCATCGTTA
TCAGCAAGTCTTTTGGAACGTTACTACAAACAGCGAGAGGATGTCATGTT
TTTAAAGAAACGACAATTTCTGATCGAAAGGGAACATTTTCTCGACTCGC
AACTTGATGGTTATATTAATGAAATACCGCGTGATCATCCCGTTGATAAA
GGACTGGACCTCATTTATGCTGTCAATAAGTCAAGGGCCATCAATAATTG
GGCATCGTTATCAGCAAGTCTTTTGGAACGTTACTACAAACAGCGAGAGG
ATGTCATGTTTTTAAAGAAACGACAATTTCTGATCGAAAGGGAACATTTT
CTCGACTCGCAACTTGATGGTTATATTAATGAAATACCGCGTGATCATCC
CGTTGATAAAGGACTGGACCTCATTTATGCTGTCAATAAGAGCAAACCTT
TAGTGGAAGTGTTACAACACACCTCTCGTCCCACCTCACCATGGAAAAGT
CGCCCATCTTTCAAGAAGATGAATGATCAGAAGTCACACGCACGCATGAT
GGTTTCACCTGTTCAAAGCATGATGACTTACGAGCAAACCTTTAGTGGAA
GTGTTACAACACACCTCTCGTCCCACCTCACCATGGAAAAGTCGCCCATC
TTTCAAGAAGATGAATGATCAGAAGTCACACGCACGCATGATGGTTTCAC
CTGTTCAAAGCATGATGACTTACGGGGAGAGTGGAGATGCAGAACTACAA
ATCGATTCCAATAACAACATATTGCCCATCGATTCCTTCAATATACAAAA
CGAAAATCCAAATGAGGGGAGAGTGGAGATGCAGAACTACAAATCGATTC
CAATAACAACATATTGCCCATCGATTCCTTCAATATACAAAACGAAAATC
CAAATGAGGTGTCACCACCTACTACTTGTACCCTAACATCACCAGCGAAA
CTTCCATCTTCTAGAACAAGACCATCGTCTGCTTATCGTCCCGCAACTGC
AGGTCCTTCAATAAATACAAGAGAAAAATCGAACCCTACCGTAAAAACTG
AACGATCAAGGCCTGGCAGTGCTTCAACGTCGGTGTCACCACCTACTACT
TGTACCCTAACATCACCAGCGAAACTTCCATCTTCTAGAACAAGACCATC
GTCTGCTTATCGTCCCGCAACTGCAGGTCCTTCAATAAATACAAGAGAAA
AATCGAACCCTACCGTAAAAACTGAACGATCAAGGCCTGGCAGTGCTTCA
ACGTCGCGTACATCACAAAAGAGGAGCACAAAAAGTGCAATGGGAAGCTT
AAAACGTGACCTCGGGAATGTCAAAGCAGCGTACATCACAAAAGAGGAGC
ACAAAAAGTGCAATGGGAAGCTTAAAACGTGACCTCGGGAATGTCAAAGC
AGCCTCGCAAAAAGTTGGCAATCATACGAAGCAACGTCCTTTCTCAGCTC
AATGTGTTGGCGTCAAATATTTTACGGCGTCGTTACATGACGTCATTGAA
CCTTGTACATCGGTGTCGATCGAACGTCAACGGCAACTAGATGTGGTGGA
GAAAAGACTTCAAAAAACAACGCAACTTTTACAAAAGAAATTATCCATAA
ACCCCTTGAGCTTTGTCTGACCTCGCAAAAAGTTGGCAATCATACGAAGC
AACGTCCTTTCTCAGCTCAATGTGTTGGCGTCAAATATTTTACGGCGTCG
TTACATGACGTCATTGAACCTTGTACATCGGTGTCGATCGAACGTCAACG
GCAACTAGATGTGGTGGAGAAAAGACTTCAAAAAACAACGCAACTTTTAC
AAAAGAAATTATCCATAAACCCCTTGAGCTTTGTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038_pilon | genome | sc0000038_pilon:1647658..1652578 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 979-1194:217 |
| Aaloc | 904-975:1054 |
| Aaloc | 730-903:1381 |
| Aaloc | 640-729:1615 |
| Aaloc | 496-636:2794 |
| Aaloc | 286-495:3672 |
| Aaloc | 226-285:4052 |
| Aaloc | 175-222:4466 |
| Aaloc | 1-171:4922 |
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