XLOC_036102 (mRNA) -

Overview
NameXLOC_036102
Unique NameXLOC_036102
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000011_pilon:1525688..1526890+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036102 ID=XLOC_036102|Name=XLOC_036102|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1203bp|location=Sequence derived from alignment at sc0000011_pilon:1525688..1526890+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAATGTCCAAGTGTTGGTTGTCTTGGCATCCCTCGCAATATATTC TTGCTCAATATGCCCAGAAACGATGTCAGATCGTGAATACTGTTCATGCT ACAGCAATACAAAACAAGTCACATGTGTTGGTAAATCATTGACAGCAATA CCCAGAGGAATTCCACAAGACACAGTAGAATTAACGCTTGAGAATAATAT CATCCAAAGAATCACCAAAGATGATTTGAAAGGTTTAACATCCTTAAAGA GATTGCAACTTCATCAAAACAGTATCTCTAGTATTGAAGATGATAGTTTC ATGGACCTAACATCACTGGAAACTCTATCTTTGTATAAGAATCAAGTAGG ACGAATCACAGCTAACACCTTCAATGGACTCTCAAAACTGGAAACACTCT GGATGAATGAATTCTCACCACGTGGGACTCCTCTCTGTATTGAAGATGGT TCATTCACCAAAACACCAGAGCTTCTATATCTATTTATTGAAGATAACGA CTTCACATATCTATCTGATGGTACATTCACTGGTCTTTCAAAACTCGTAA CCTTAAGATTGACATTGGATCGAATTGGTCTCATCTCAGAAAACGCACTC AAACAATTCCCTTCCAATGTATTCATCGACCTGGCAAATCCCACATTCAA ATCCGGAGTCTGTTGCTGTAGTACTGCGTTTGCTATCCAGAAATATCTTA AATCTCCAACGAGTGCCGCAGAGAACCAAGCTTTAGTTTGCTCTCCAGAT CGATGTAAAGACCTCTTAATGTGTCTGCAGTCTTACAATGGAACATGTGT CAGACAGTTGCCaccaactacaacaacgacgtctacaacaacaaccacga ccactactacgaccacaacctcaacaGAACCTCCATCCACCACTGAAGAG CCTGATCCAGTCAAGCCTGTTACTCTGCCACCAGCTACTGGTAGTTGTCC AACTGAATGTAATTGTAGACCTGATACAAAACTTGTTTCATGTAGCGGAC GACAATTAAGCCGAGTTCCATCTAACATCCCTGCTGATACAGAACGACTT ATCTTAAGCGCAAACAATATTGATCGAATCCGAAGATACGATTTTTACAT GTTAACCAACCTTAAGGAACTCCAGCTTCATGAAAATAGAATTACAGTTA TTGATGATTATAGTTTTGAAGATCTTCACCAACTGCAATCACTTTTCTTA AAc

Coding sequence (CDS) from alignment at sc0000011_pilon:1525688..1526890+

>XLOC_036102 ID=XLOC_036102|Name=XLOC_036102|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2406bp|location=Sequence derived from alignment at sc0000011_pilon:1525688..1526890+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGAATGTCCAAGTGTTGGTTGTCTTGGCATCCCTCGCAATATATTC
TTGCTCAATATGCCCAGAAACGATGTCAGATCGTGAATACTGTTCATGCT
ACAGCAATACAAAACAAGTCACATGTGTTGGTAAATCATTGACAGCAATA
CCCAGAGGAATTCCACAAGACACAGTAGAATTAACGCTTGAGAATAATAT
CATCCAAAGAATCACCAAAGATGATTTGAAAGGTTTAACATCCTTAAAGA
GATTGCAACTTCATCAAAACAGTATCTCTAGTATTGAAGATGATAGTTTC
ATGGACCTAACATCACTGGAAACTCTATCTTTGTATAAGAATCAAGTAGG
ACGAATCACAGCTAACACCTTCAATGGACTCTCAAAACTGGAAACACTCT
GGATGAATGAATTCTCACCACGTGGGACTCCTCTCTGTATTGAAGATGGT
TCATTCACCAAAACACCAGAGCTTCTATATCTATTTATTGAAGATAACGA
CTTCACATATCTATCTGATGGTACATTCACTGGTCTTTCAAAACTCGTAA
CCTTAAGATTGACATTGGATCGAATTGGTCTCATCTCAGAAAACGCACTC
AAACAATTCCCTTCCAATGTATTCATCGACCTGGCAAATCCCACATTCAA
ATCCGGAGTCTGTTGCTGTAGTACTGCGTTTGCTATCCAGAAATATCTTA
AATCTCCAACGAGTGCCGCAGAGAACCAAGCTTTAGTTTGCTCTCCAGAT
CGATGTAAAGACCTCTTAATGTGTCTGCAGTCTTACAATGGAACATGTGT
CAGACAGTTGCCaccaactacaacaacgacgtctacaacaacaaccacga
ccactactacgaccacaacctcaacaGAACCTCCATCCACCACTGAAGAG
CCTGATCCAGTCAAGCCTGTTACTCTGCCACCAGCTACTGGTAGTTGTCC
AACTGAATGTAATTGTAGACCTGATACAAAACTTGTTTCATGTAGCGGAC
GACAATTAAGCCGAGTTCCATCTAACATCCCTGCTGATACAGAACGACTT
ATCTTAAGCGCAAACAATATTGATCGAATCCGAAGATACGATTTTTACAT
GTTAACCAACCTTAAGGAACTCCAGCTTCATGAAAATAGAATTACAGTTA
TTGATGATTATAGTTTTGAAGATCTTCACCAACTGCAATCACTTTTCTTA
AAcATGAAGAATGTCCAAGTGTTGGTTGTCTTGGCATCCCTCGCAATATA
TTCTTGCTCAATATGCCCAGAAACGATGTCAGATCGTGAATACTGTTCAT
GCTACAGCAATACAAAACAAGTCACATGTGTTGGTAAATCATTGACAGCA
ATACCCAGAGGAATTCCACAAGACACAGTAGAATTAACGCTTGAGAATAA
TATCATCCAAAGAATCACCAAAGATGATTTGAAAGGTTTAACATCCTTAA
AGAGATTGCAACTTCATCAAAACAGTATCTCTAGTATTGAAGATGATAGT
TTCATGGACCTAACATCACTGGAAACTCTATCTTTGTATAAGAATCAAGT
AGGACGAATCACAGCTAACACCTTCAATGGACTCTCAAAACTGGAAACAC
TCTGGATGAATGAATTCTCACCACGTGGGACTCCTCTCTGTATTGAAGAT
GGTTCATTCACCAAAACACCAGAGCTTCTATATCTATTTATTGAAGATAA
CGACTTCACATATCTATCTGATGGTACATTCACTGGTCTTTCAAAACTCG
TAACCTTAAGATTGACATTGGATCGAATTGGTCTCATCTCAGAAAACGCA
CTCAAACAATTCCCTTCCAATGTATTCATCGACCTGGCAAATCCCACATT
CAAATCCGGAGTCTGTTGCTGTAGTACTGCGTTTGCTATCCAGAAATATC
TTAAATCTCCAACGAGTGCCGCAGAGAACCAAGCTTTAGTTTGCTCTCCA
GATCGATGTAAAGACCTCTTAATGTGTCTGCAGTCTTACAATGGAACATG
TGTCAGACAGTTGCCaccaactacaacaacgacgtctacaacaacaacca
cgaccactactacgaccacaacctcaacaGAACCTCCATCCACCACTGAA
GAGCCTGATCCAGTCAAGCCTGTTACTCTGCCACCAGCTACTGGTAGTTG
TCCAACTGAATGTAATTGTAGACCTGATACAAAACTTGTTTCATGTAGCG
GACGACAATTAAGCCGAGTTCCATCTAACATCCCTGCTGATACAGAACGA
CTTATCTTAAGCGCAAACAATATTGATCGAATCCGAAGATACGATTTTTA
CATGTTAACCAACCTTAAGGAACTCCAGCTTCATGAAAATAGAATTACAG
TTATTGATGATTATAGTTTTGAAGATCTTCACCAACTGCAATCACTTTTC
TTAAAc
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_036102XLOC_036102-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000011_pilongenomesc0000011_pilon:1525688..1526890 +
Properties
Property NameValue
Aaloc1-1203:1