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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000071_pilon:1296002..1299432- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035989 ID=XLOC_035989|Name=XLOC_035989|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3431bp|location=Sequence derived from alignment at sc0000071_pilon:1296002..1299432- (Clytia hemisphaerica_ch_hm2_pilon)
GCATCAACTCTAAACACTAAAGAAGTGAATTCAAAGGACAAGAATATATT
TTATGCACATGACAAACCAAAAAGATGTGCTTATGAGAATGTGATATCGA
ATCATACTTTTATTTTGAACAAACAAGCAGGTGTGTTCACGCACCTTGGT
CACACGAAGGATATTCACCAGTGCAAACAAATGTGTTGCCAGGTAAGCAA
GATAATGCAATCAACCCTTTCTGACTTCCCGAATTCGAAGAAAACTGGTC
CCTTGAAATTCGAAGAGATTCAATTTACAATTTCTTTTTATACACCTTTT
CGACCGTAGCCGCCAATGGCCGTGCAAGCATTTTTTTTGCTCATTTTACC
ACCCTAAAACCGCCCCAGTCTTTTTTCGAACCTAAAGTTAATAGAAATAA
ACCAGCCGAGGCTGGAAGGTCAGCCAATAGAGCTTAGCTAGATAGCTTTA
ATAAGGGGGTTAACAGATGTAAGAGATGTACTGAAACAGAGTAGACCAAA
AATGTTGAATAATGTACAAAATGTGAAACATTTGATAACTTGATTTAAAA
TTATTTAAAACAAGCCTGAGAGCTCCTCCAACCCCCCCCCCCCCCCAACT
GTTTCTACGACATCAAACAATTAAGCTATAGTTCATTACTATAAAATAAA
AGAGAAACATAGTGTAATTAAAACTTTTTGTTAATTTGATTCCAGTCAGT
TATGATACATTTTCTTCTGTTGGATGTAGACAATATCCATATCTAACCAA
AGTGTTATCTAGAAATAAATTAGCAAATTGCCAAAACGTTAGAACCAAAA
TAAAGATATCCATCAAATATACATAGAAATTGTACTTTTTGTTTTACTTG
ATAAAACTCCAATAACACTTTAAACTAACAAGCTACAAACTTTAAGTCAC
AAAGCACAAACTCCAGAAAAACACAATTTGCATCAAAATCTTTGCAAAAC
GTAGTTCATATTTATAACATTTCAACAGGAACTGTATTTTGGTAGACTTG
GTCAAATTACAGAAACCATTTGTCAGTTGTCTGCAAGGCCAATGAGTACG
TAAAAACTGACTGCTATTCAGTCAAAGCCATAATTTGGCAAGGTCAGAAA
AACATAATTTACATCCAGTCTTCGTAAATAAATTTTGTAGTTTAGTACCG
TCGAGTTACACAACATGCACACAACCATCTTGAAGACTTTGCTGGATAAT
CGAAAGCAAAACTTAAAATTCATAACTATTCAAGGAAGCTCATTTTTCCC
CCATTTTGCTTTAAACTCCCTTTTGATTGGTCTATGAATTTGGGCGATCG
CTTTACCGCCTTGACAGAATAAACACACGACCATAATAAATAAATTCAAC
AGGGCAGCGGAGTAGCAATTAATTTCAACTGTGAGTCCTCTCTTCTGTGC
CAAGCACTGGCAGTGTTTTTTAAACTTTAAAACAATGTTAAATGAAGACC
AGATGGATCTATTTGTTATGACTGTGCAAGTTGTGACGTGAGTGTGCATG
TTGTGTAACTTGACGGTATAATTCATTAAATTCTAGAAACCATTTTTCAT
AACTTTCTGCAGTCCGCTTTCTGCAAGTCTGATAAGAGATATGTATAAAA
AGTTATCGCCATTCATTCCATTCCATCATTCAGTCAAAACGTGCGCCAAG
GTTAGAAAAGGTTAGAAAAACACAATCTGCGTCCGGAACTGCGTGAAAAA
TAGTTAGATCAATTTCAACAAGAACTGTATACATTAATATTAATATAATT
GATCAAATTTCAAAGACCATTTGTCATAATTTTGCAAGTCCAATAATAGG
AGATGTGATGTCATCATTTGGTTCCCGTCATCTGACCGACCCTGATTTAC
GGTCAGCAGGTAGAGTTGGAGAGTCGGAAAGCTTTTCCGCTGCTTTGCTG
GATTTCCAATGTCGACCTCTGCACGCTCTGTGTTTACAAGTTTTCAAATC
GAAGTAGCGAGCCGCTACCCTGAGTATCAAAGGTTAAGTTTTCGTAGAAT
ATATTAACCTCTGAAGACCGATAATAGAAATTTTATCGCGCATGTGTCAA
TCTAATCAATGTAGAAAGAATCAGAGATGAAGAGCAAATAATACCTTATT
AATGTCTAGCAAACTGTATCAGTATGCAGTTTACTATTTACGAATTCCCC
AGAAACCTCCAAGTGTAATCGAAGTGATTTTCTTTCGAAAGAAATCTTTT
ACATGATCCCCGAATGTATAGCAGTAATTACTAAACTATTAATTATGGAA
ATGTCACTTTCAATTGAATCGAAATAATAGACAGACTTTATGTTATGATT
CTCTATCACTGACTCTTTTTAAAAAGCATTGATGATATTTCTTTGTTGTG
TTTTCAACGACGGGAATAAAAATGTCAACTTTGAACCTCATCCAAGATCT
TGGATGGTCGTCATGGTTACTTTTGTCTTCGTTGATTGCGCGCTGAATAG
AATCTCGATTCGTCGGCACAGCGTAAATATATGATTTTGAGCTGTGCTTT
TCACGGTAGCGAGCCGCATGCTAATGGAGAGTAAACCGAAAACCAGTTTA
TCCACGGTTTCTCAATTTCTTAATTCAGATCAGTCCACACGGATTCCCTT
TCAACAAGATGTATAGCTGCTTCTTAAAAGATTTTCGACCGACCGACCGA
CCCCCACTTTTAAAAAAAATGACGGGAATCAAATAATTTTTTGCGATTCG
CCTTATCAAACACTTCAAACCAAGTCCAAAAAAGCACGATTGCATCCAGG
CTTTATCAAATTTAGACAGTAGCTGTACTTTTTTTTCCGTCTTATGGAAC
TGGACGTGGAAAATTTTACCTATTTGAATGCTCAGCTTAGGCTGACCAAT
AAGTGTAAACAAAGGATTGGATCGAGATTGGGGTGATAAATTAAATAATA
AAGTGGCACGCGCCTGACAGCACGACTGCGGTCGAAAAGGTGTATTGACC
AATTTACAATTTCATTGTATTGATCCTCTGTCCTTGTTTCCAATAGAAAC
TTAAGAATTAGGAAATATCCCTGTCTGCTTATAATGATTTTTGACAAAAA
TGATCTATCATAAAAAGTCAGAAAGAATATTTAGATAAATTAGTGGCAAA
GACGCTAAATAATTTATTTTTCATTCATTGGAAAGAGAGAAAAATTTTCA
TTAAATAAATAAACTATTTCCAGGTTTCAGATTGTGATGTAGCATTTATG
CCGGAGAATCATTGTTACGGCGTCTCATGCTATTCTGATCAACACTGTCA
GACGACACCAGCGACTGCCGAAGCATTTAACGTCAAATTAGTAAAAGTCC
GTCGCGTCGTTATCCCGACTCCCGACGACTTTTATGAAGAAGACTATAGT
CGATCGGGGGTACCGGAGATTGCAGTCGCAAAACAAAAGATTGAAGAAGA
AAAAGTGAAGCCAAACACAACGAAGGAAGAA Coding sequence (CDS) from alignment at sc0000071_pilon:1296002..1299432- >XLOC_035989 ID=XLOC_035989|Name=XLOC_035989|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=900bp|location=Sequence derived from alignment at sc0000071_pilon:1296002..1299432- (Clytia hemisphaerica_ch_hm2_pilon)
GCATCAACTCTAAACACTAAAGAAGTGAATTCAAAGGACAAGAATATATT
TTATGCACATGACAAACCAAAAAGATGTGCTTATGAGAATGTGATATCGA
ATCATACTTTTATTTTGAACAAACAAGCAGGTGTGTTCACGCACCTTGGT
CACACGAAGGATATTCACCAGTGCAAACAAATGTGTTGCCAGGCATCAAC
TCTAAACACTAAAGAAGTGAATTCAAAGGACAAGAATATATTTTATGCAC
ATGACAAACCAAAAAGATGTGCTTATGAGAATGTGATATCGAATCATACT
TTTATTTTGAACAAACAAGCAGGTGTGTTCACGCACCTTGGTCACACGAA
GGATATTCACCAGTGCAAACAAATGTGTTGCCAGGTTTCAGATTGTGATG
TAGCATTTATGCCGGAGAATCATTGTTACGGCGTCTCATGCTATTCTGAT
CAACACTGTCAGACGACACCAGCGACTGCCGAAGCATTTAACGTCAAATT
AGTAAAAGTCCGTCGCGTCGTTATCCCGACTCCCGACGACTTTTATGAAG
AAGACTATAGTCGATCGGGGGTACCGGAGATTGCAGTCGCAAAACAAAAG
ATTGAAGAAGAAAAAGTGAAGCCAAACACAACGAAGGAAGAAGTTTCAGA
TTGTGATGTAGCATTTATGCCGGAGAATCATTGTTACGGCGTCTCATGCT
ATTCTGATCAACACTGTCAGACGACACCAGCGACTGCCGAAGCATTTAAC
GTCAAATTAGTAAAAGTCCGTCGCGTCGTTATCCCGACTCCCGACGACTT
TTATGAAGAAGACTATAGTCGATCGGGGGTACCGGAGATTGCAGTCGCAA
AACAAAAGATTGAAGAAGAAAAAGTGAAGCCAAACACAACGAAGGAAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000071_pilon | genome | sc0000071_pilon:1296002..1299432 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 193-450:259 |
| Aaloc | 1-192:3432 |
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