XLOC_035978 (mRNA) -

Overview
NameXLOC_035978
Unique NameXLOC_035978
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000071_pilon:1517592..1518397+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035978 ID=XLOC_035978|Name=XLOC_035978|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=806bp|location=Sequence derived from alignment at sc0000071_pilon:1517592..1518397+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCACCGCCTTAACAGAAGAATTGATGAGTTTAGAAGTGTATGCTAAGCA GGCAAAAGCTGAATCACTCAGTTTTCTACGAACAGGGGAACAAAAATCTA TGAGGTAGGTATGCCTAActactgaaaaattgaaaaaatatcataattGA CTTATATGTTCTCTATAATCAAGACCGCACCTAGCAATTTTCCCTCCCTT CCAGATCTGATGAGttttttttCGCCTATAGGTACATATTCGTTACCGAA GATGACCTGAAGAAAGGTCAAGAAATTGACTCGCTTAAAAAGaggtaaat ttcaattttgcttTGCATCATAAGTGGTCTAAGTGTCGACTCAATATTAA ATAAAGTCTTAATTAAAAAGAATACCTAGCAACGTTTACTCTGTATCTCA CGATTTTCGTttcgttttgaattttgaaattagccgtagataccgGGTGT ACAGGCAAAGCAACAGTACGCTAAGTTGTAAACTTATTCCagcctttaca acaatacaaaaCTAAACCTAGGACATGTGTGTTGTAAAATCAGTATCTAA TGAGTGACTATCTACACTAGATATCTACAACAACTGCAAAAACCTGTGCA CTATAAACAAGAACCAATATTGATATTTTAGTCAAATTGAAGCCAAAATT GTGGAAATCTTGGAAGAACGTAACGACCAGGATTTATATGAGAAATTCCA TGAAAATGTATGtggcaagaaaaagaaaatgtacaaaaacTTTCTGAAGA ACCTGAACGGATTTCCTGTTGTCGACGATGTTGTCGATATGGATGTTGAG CAATAA

Coding sequence (CDS) from alignment at sc0000071_pilon:1517592..1518397+

>XLOC_035978 ID=XLOC_035978|Name=XLOC_035978|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=684bp|location=Sequence derived from alignment at sc0000071_pilon:1517592..1518397+ (Clytia hemisphaerica_ch_hm2_pilon)
AGCACCGCCTTAACAGAAGAATTGATGAGTTTAGAAGTGTATGCTAAGCA
GGCAAAAGCTGAATCACTCAGTTTTCTACGAACAGGGGAACAAAAATCTA
TGAGAGCACCGCCTTAACAGAAGAATTGATGAGTTTAGAAGTGTATGCTA
AGCAGGCAAAAGCTGAATCACTCAGTTTTCTACGAACAGGGGAACAAAAA
TCTATGAGGTACATATTCGTTACCGAAGATGACCTGAAGAAAGGTCAAGA
AATTGACTCGCTTAAAAAGagGTACATATTCGTTACCGAAGATGACCTGA
AGAAAGGTCAAGAAATTGACTCGCTTAAAAAGagTCAAATTGAAGCCAAA
ATTGTGGAAATCTTGGAAGAACGTAACGACCAGGATTTATATGAGAAATT
CCATGAAAATGTATGtggcaagaaaaagaaaatgtacaaaaacTTTCTGA
AGAACCTGAACGGATTTCCTGTTGTCGACGATGTTGTCGATATGGATGTT
GAGCAATAATCAAATTGAAGCCAAAATTGTGGAAATCTTGGAAGAACGTA
ACGACCAGGATTTATATGAGAAATTCCATGAAAATGTATGtggcaagaaa
aagaaaatgtacaaaaacTTTCTGAAGAACCTGAACGGATTTCCTGTTGT
CGACGATGTTGTCGATATGGATGTTGAGCAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035978XLOC_035978-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000071_pilongenomesc0000071_pilon:1517592..1518397 +
Properties
Property NameValue
Aaloc169-342:633
Aaloc106-165:233
Aaloc1-102:1