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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000009_pilon:505103..509885+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035976 ID=XLOC_035976|Name=XLOC_035976|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4783bp|location=Sequence derived from alignment at sc0000009_pilon:505103..509885+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAGTGTATTTCAGTTTTAcattaattctttttttggtGCTCTTTTC
CGTTCATACCAATTGTTCGGGGGATGACGATGCAACTGATAGTATAGGAA
ATGATTTGGATGGAGAAGATGTGAACGCTGATGGAAATGCCGAAACTAGA
GATGAACCGCAGCAACAGCAGATCAGAACATCAGAAACAACGCATAAAGC
CATCGATGACCGAATTTATGATGAGGCATTACATTTACTTAAACAACCAG
ATGAAATTAGGCTTGTTCACTCTTATACCTATtcccaaaggaaaatttat
gaGCTCGCCAAGAAGGGTCTAAAAACTCAGGAGATATTTAATCCAGTGaa
aaaaaCGACTGCCCCTGAAATAGCTGATGCTGAAAAGAAGATCGTTCCAA
AAAAGTCAGATTTGGAACTGATTGTTAAACACTTTCACCACGTATTAAAA
GGAGAAGGAGCACATAAAATACATATCAGAGCTCGGATAAAGTTTCATGG
TATAACAAGACGTTTCGTTCAAACCTGGCTTAATCGAAATAAAGAACATA
CCCAGCACCAACCAGTTTTTTCAAACAAGGCTCCAATAACACCCGTCGTA
TCAAAAACGGTCAATGGACACCACCAAATTGATCTTGTTAGCATGGAGAA
TTTTCCCGTTCAAATAGGTGACCAGATTTATGTTCAAATCCTATCCGTAA
TAGACAATTTCACAAGATTTCTACAACTCAGACCACTAACATCGAAAGAA
CCCAAGGAATTGTTATTACACATCATACAAATTTACAGGTATTTTTTATG
ATCAATTTCATTATAATTATTTGTATCTTTGGAGTGTTATGAATGATACG
AACACGCGACTGttttagtttaaaaataaacaaaatccgCCTTCAAGTAC
AAATATCTTACTTTGAAACCAACTAAAGCATCTGACTTGGATGGTAGATG
tatgattttatagaaaaaagccGTTTCTATGAAATGCTTCTATTTTGGTT
CTAGAGTTATGCCGAGTTGAACCAAAATGGAAGCACCTCTAAATCAGCAT
CTTAATTTGAATAAGTCATGATAAACCAATTCAATTATATGACCTGAGTG
GTAGATATAttatgattttatagaaaaaaaCAgtttcTatGAACTGCTTC
TATTTTGGTTCCAGAGTTATTCCGAGTTGAACCAAAATGGAAGCACCTCT
AAATCAGCATCTTAATTTGAATAAGTCATGATAAACCAATTCAATTATAT
GACCTGAGTGGTAGATAtatgattttatagaaaaaaaaaaccgtttctAT
GAACTGCTTCTATTTTGGTTCCAGAGTTATTCCGAGTTGAACCAAAATGG
AAGCACCTCTAAATCAGCATCTTAATTTGAATAAGTCATGATAAACCAAT
TCAATTATATGACCTGAGTGGTAGATAtatgattttatagaaaaaaaccg
TTTCTATGAACCTGCTTCTATTTTGGTTCTAGAGTTATTCCGAGTTGAAC
CAAAATGGAAGCACCTCTAAATCAGCATCTTAATTTGAATAAGTCATGAT
AAACCAATTCAATTATATGACCTGAGTGGTAGATAtatgattttatagaa
aaaaaccgTTTCTATGAACTGCTTCTATTTTGGTTCCAGAGTTATTCCGA
GTTGAACCAAAATGGAAGCACCTCTAAATCAGCATCTTAATTTGAATAAG
TCATGATAAACCAATTCAATTATATGACCTGAGTGGTAGATGtatgattt
tatagaaaaaagccGTTTCTATGAACTGCTTCTATTTTGGTTTCTAGAGT
TATGCCGAGTTGAACCAAAATGGAAGCACCTCTAAATCAGCATCTTAATT
TGAATAAGTCATGATAAATCAATTCAATTATATGACCTGAGTGGTAGATG
tatgattttatagaaaaaaaaccgtttctATGAACTTGCTTCTATTTTGG
TTCCAGAGTTATTCCGAGTTGAACCAAAATGGAAGCACCTCTAAATCAGC
ATCTTAATTTGAATAAGTCATGATAAACCAATTCAATTATATGACCTGAG
TGGTAGATAtatgattttatagaaaaaaaccgTTTCTATGAACTGCTTCT
ATTTTGGTTCCAGAGTTATTCCGAGTTGAACCAAAATGGAAGCACCTCTA
AATCAGCATCTTAATTTGAATAAGTCATGATAAATCCAATTCAATTATAT
GACCTGAGTGGTAGATGtatgattttatagaaaaaagccGTTTCTATGAA
CTGCTTCTATTTTGGTTCTAGAGTTATTCCGAGTTGAACCAAAATGGAAG
CACCTCTAAATCAGCTTCTTAATTTGAATAAGTCATGATAAATCAATTCA
ATTATCTGACCTTTGTGGTAGGTGTAtgatttttatatgattttatagaa
aaaagccGTTTCTATGAACTGCTTCTATTTTGGTTCCAGAGTTATTCCGA
GTTGAACCAAATTTGACGCACCTTCAAAATATTATTTCACTATAGTGTCA
CTTTCCACAGATCTGTCCACAAAAATTTGGCCATTCCCTCTGATTTATTT
AGCTGTAGAATCTGAAATCCTCACCTGTTCATGGGGATATAGAATTTATC
ACTTTATCACTGGCGGGATAGGATTGTAAAGAATTTATTGTGAGGTGCTC
GAAGttagtttttactttttctttccaGAACATTTGGCCCTCCTAAGATA
GTCCAGTCGGATAGAGGAACTGAGTTCCGAGGTGAATTAAAGCTTTTCCT
CGAAAGAGTTGGAATTGAAGCTAGAAACAGTCGTGCCTACCATCCGCAGA
GTCAAGGAAAGAGTGAAAGAAGCCATCGTACATGGAAAAATAAGATTCGA
TATTGCTTTACCAAAATTGCAGAAGGTGGAGGTATGCTTTTTATTGTACT
GTATCCAAACATATTCAACTATTCTTTTTTACTAAATTTAGAAAATAGTT
TGAGAGTAAAAGGGCAAAAACGAGAGGTACAGGCAGTCCACAAACTTACT
ACATCTATAGATAACATATGCTTTTTTCATAGCCAATAACATTTCTTACT
ATAACTTATTTAATCTTCTCCTAGAAAATTGGGTAGAACGTCTTGGAGAA
TGTCAAGACCAATACAACACTGGTGCGCATCGTTCCATTGGAAAAAACAA
AACTCCATTCGAGTTATTCTTTGGacgaaaaccaaatttcgataTTGCGT
TGTTTGACAcaggtagatttttttttaaattctattttcGATTTTTATGA
GTCTCCGGATGCGCTGCTGGAGGTTTAAAAGTAAAGCTCGAAGAATAGAT
GACTTCGTTCCTACTTTTCaagcaaacaaaattgaaagaacACAAATCAA
ACATCAAAGTATTTgcgttttttcgtttttcttgaTAATGTTTAgcaaat
ttcttgaaaattttataatttaatttCAGCTTTTGAAGGACTTCTTGGCG
CAGCTGAAAACCAAGAATATAGTAGCAACGATGACTCCGAGGAAGGTATT
CATTTGATTCTAAGTGATTTTTATAGCaaaacaagaaagcctaagtGGCG
TTATGGCCCAGCAGTGTTGGTATTGTCAACATACTTTCCATTGCAGAGTC
GCCATACAACTCAATTTACAGGGGTGAATTTTTTCGATATATAGgcaggg
ggggtcatgcagttattatataaacactatgacaattactaccgtggtgg
taatCCGGTGAGCAATTGGTGCCTaatgtcgattttggtaggattgGTGT
ACTATGAGCATTTTTaattaggtttttaaaaattccggaagcaaaaaaat
tcaaaacattttttcaaagtcaaaaaaaatcacaaaattttttcattaat
caaggcatgaaagatattttaacaaacttggaaaatgattgagatattta
actcttgaacggtcgttaataagtcgtacccagtaaaatggtatcaaaaa
tgaggaattcagtgaaaaaattgccaaatttggcatttttgggggtggta
tacaccaattttgagggtaaaatcagtaagtacactatggaataactgca
agggtggtggtgtctgtagaaaatgtccaaaattgcagttactccacata
gtgtcaaggagtaactgcaagaccccccccccctgatataGGGAAACTCG
AATCCGGTGAGCAATTTGTAATGAATTAATTAGGTGCTTTagttcttttg
aaagaaatattAAACTGGAAGTTTTAACACTAACTCTTCACTTTGGAATT
TACAGAATCAGAACTAAACTTACCTTTGATTGTCAATTcaaacaatacac
aacaacaacaacagcaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaaaattccAACGAACACCAATCGACCCTAAACGA
ATCATTTGGTACATGTGACTTAGACGGTTTGTTTCATAAGTTTTTCCGTG
GGGACTAAAGATCCGAAAATATGAACACGTTTCGTGGGAACATTTCCATT
GCTCAAGCTACTTTGATAATTTACGAACTAAATATACATACTCTAAAACT
GTCGGATTGACTTTCAATGATTTAAAGAAAAGTATCAAAACATGAAGGTG
CTTTCCACGAATTTTAGCACGACTTGTACGTCGTCAGAAGCACATATCAT
TATCAATTTCGCAAgataattcttataaaatcttcttttcttAACAGGCA
ACCAAATCGACGAAACTCGCTCAAACTTAGAAAATTGCAAAACCACTGAT
AGGACAGCCAAGACTCCGCGTGATTTGACACAA Coding sequence (CDS) from alignment at sc0000009_pilon:505103..509885+ >XLOC_035976 ID=XLOC_035976|Name=XLOC_035976|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2904bp|location=Sequence derived from alignment at sc0000009_pilon:505103..509885+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAGTGTATTTCAGTTTTAcattaattctttttttggtGCTCTTTTC
CGTTCATACCAATTGTTCGGGGGATGACGATGCAACTGATAGTATAGGAA
ATGATTTGGATGGAGAAGATGTGAACGCTGATGGAAATGCCGAAACTAGA
GATGAACCGCAGCAACAGCAGATCAGAACATCAGAAACAACGCATAAAGC
CATCGATGACCGAATTTATGATGAGGCATTACATTTACTTAAACAACCAG
ATGAAATTAGGCTTGTTCACTCTTATACCTATtcccaaaggaaaatttat
gaGCTCGCCAAGAAGGGTCTAAAAACTCAGGAGATATTTAATCCAGTGaa
aaaaaCGACTGCCCCTGAAATAGCTGATGCTGAAAAGAAGATCGTTCCAA
AAAAGTCAGATTTGGAACTGATTGTTAAACACTTTCACCACGTATTAAAA
GGAGAAGGAGCACATAAAATACATATCAGAGCTCGGATAAAGTTTCATGG
TATAACAAGACGTTTCGTTCAAACCTGGCTTAATCGAAATAAAGAACATA
CCCAGCACCAACCAGTTTTTTCAAACAAGGCTCCAATAACACCCGTCGTA
TCAAAAACGGTCAATGGACACCACCAAATTGATCTTGTTAGCATGGAGAA
TTTTCCCGTTCAAATAGGTGACCAGATTTATGTTCAAATCCTATCCGTAA
TAGACAATTTCACAAGATTTCTACAACTCAGACCACTAACATCGAAAGAA
CCCAAGGAATTGTTATTACACATCATACAAATTTACAGATGCAAGTGTAT
TTCAGTTTTAcattaattctttttttggtGCTCTTTTCCGTTCATACCAA
TTGTTCGGGGGATGACGATGCAACTGATAGTATAGGAAATGATTTGGATG
GAGAAGATGTGAACGCTGATGGAAATGCCGAAACTAGAGATGAACCGCAG
CAACAGCAGATCAGAACATCAGAAACAACGCATAAAGCCATCGATGACCG
AATTTATGATGAGGCATTACATTTACTTAAACAACCAGATGAAATTAGGC
TTGTTCACTCTTATACCTATtcccaaaggaaaatttatgaGCTCGCCAAG
AAGGGTCTAAAAACTCAGGAGATATTTAATCCAGTGaaaaaaaCGACTGC
CCCTGAAATAGCTGATGCTGAAAAGAAGATCGTTCCAAAAAAGTCAGATT
TGGAACTGATTGTTAAACACTTTCACCACGTATTAAAAGGAGAAGGAGCA
CATAAAATACATATCAGAGCTCGGATAAAGTTTCATGGTATAACAAGACG
TTTCGTTCAAACCTGGCTTAATCGAAATAAAGAACATACCCAGCACCAAC
CAGTTTTTTCAAACAAGGCTCCAATAACACCCGTCGTATCAAAAACGGTC
AATGGACACCACCAAATTGATCTTGTTAGCATGGAGAATTTTCCCGTTCA
AATAGGTGACCAGATTTATGTTCAAATCCTATCCGTAATAGACAATTTCA
CAAGATTTCTACAACTCAGACCACTAACATCGAAAGAACCCAAGGAATTG
TTATTACACATCATACAAATTTACAGAACATTTGGCCCTCCTAAGATAGT
CCAGTCGGATAGAGGAACTGAGTTCCGAGGTGAATTAAAGCTTTTCCTCG
AAAGAGTTGGAATTGAAGCTAGAAACAGTCGTGCCTACCATCCGCAGAGT
CAAGGAAAGAGTGAAAGAAGCCATCGTACATGGAAAAATAAGATTCGATA
TTGCTTTACCAAAATTGCAGAAGGTGGAGAACATTTGGCCCTCCTAAGAT
AGTCCAGTCGGATAGAGGAACTGAGTTCCGAGGTGAATTAAAGCTTTTCC
TCGAAAGAGTTGGAATTGAAGCTAGAAACAGTCGTGCCTACCATCCGCAG
AGTCAAGGAAAGAGTGAAAGAAGCCATCGTACATGGAAAAATAAGATTCG
ATATTGCTTTACCAAAATTGCAGAAGGTGGAGAAAATTGGGTAGAACGTC
TTGGAGAATGTCAAGACCAATACAACACTGGTGCGCATCGTTCCATTGGA
AAAAACAAAACTCCATTCGAGTTATTCTTTGGacgaaaaccaaatttcga
taTTGCGTTGTTTGACAcagAAAATTGGGTAGAACGTCTTGGAGAATGTC
AAGACCAATACAACACTGGTGCGCATCGTTCCATTGGAAAAAACAAAACT
CCATTCGAGTTATTCTTTGGacgaaaaccaaatttcgataTTGCGTTGTT
TGACAcagCTTTTGAAGGACTTCTTGGCGCAGCTGAAAACCAAGAATATA
GTAGCAACGATGACTCCGAGGAAGCTTTTGAAGGACTTCTTGGCGCAGCT
GAAAACCAAGAATATAGTAGCAACGATGACTCCGAGGAAGAATCAGAACT
AAACTTACCTTTGATTGTCAATTcaaacaatacacaacaacaacaacagc
aacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caaaattccAACGAACACCAATCGACCCTAAACGAATCATTTGGTACATG
TGACTTAGACGAATCAGAACTAAACTTACCTTTGATTGTCAATTcaaaca
atacacaacaacaacaacagcaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaaaattccAACGAACACCAATCGACCCT
AAACGAATCATTTGGTACATGTGACTTAGACGGCAACCAAATCGACGAAA
CTCGCTCAAACTTAGAAAATTGCAAAACCACTGATAGGACAGCCAAGACT
CCGCGTGATTTGACACAAGCAACCAAATCGACGAAACTCGCTCAAACTTA
GAAAATTGCAAAACCACTGATAGGACAGCCAAGACTCCGCGTGATTTGAC
ACAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000009_pilon | genome | sc0000009_pilon:505103..509885 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1366-1449:4700 |
| Aaloc | 1240-1362:4303 |
| Aaloc | 1198-1239:4258 |
| Aaloc | 1132-1194:3432 |
| Aaloc | 994-1128:3077 |
| Aaloc | 790-990:2680 |
| Aaloc | 1-786:1 |
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