|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000095_pilon:1059636..1061135+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035925 ID=XLOC_035925|Name=XLOC_035925|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1500bp|location=Sequence derived from alignment at sc0000095_pilon:1059636..1061135+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTCACCCTGATCACCAGATCATTAGAAGCCGTCACGAAGTTTTGAATGA
AGAAACTTTGTATATGTATGGTGGATTTGTTGACTATTACAAATTGAATG
TCGACATTACTGAGCCAAACTCATATCCCAATATCGTCAGCCAGCGGAGA
GAGGGTATTTGTAAGCAgatagaaatatttcaaattgaaatccCTCAAAT
TGAAATCCTCCACAATGATGAACACAAACCGaaaaaaaCGATGGAATTTA
AAATGAAACCGGACTTGACGATGaaagatttgaagaaaaaaatcggcAAG
AGCAATAAACTCGATGGTGACTTTATTGTGTTAAGCTCAAAGAAAAGTCC
AGGCGTACTTCTGGATGATGAGCAGTTGTTAGCTGATTTACTCCTCGACT
TAGATGAGGGTGAGTCACTCGAGTTGAATTTAAACATGATGGAACAAAAA
CCATTTCGTAACCCCCATTCTCATCATATGTTGCAACTTGTAAGGCTAGA
GCTTCCTTATTCAGATTCAAATAGGTATTCTAAGGTAGATTACCCATATT
TGGAAATCGGGCTTCTTGGTATTTCTGCTTTAAAGTCATGGGTCGAAGCA
AATTACGAAATACCTTGCGCAGAGCAGTTACCGACCTTAAAAgacctttt
aaaaaaatgtgaaatcaTTGAAAGTGAGACGTTCCCTGAACATCTGTGCA
ATAAAATAAGACTGGGCTGTATACAAGTAAAGCTTTTTGTGTATTCAACC
AGTGACAAAAATCTGACGTCTCTTTATCAGAAATTGGGAGTACAGACAAT
ATTACCAGTCAATGTATCCGGCTTTGGGACGTCTAACATTTTGCAATATC
ATTATCGAAAGGGAAAAGAGAAACTGGATGTATTCATCGAGAACTCGTTA
CAAATTCCGAAGCTCAAACAGCGACTTTTTGTAGATGGTTGTAGAGTAAC
GGCTAACGAtattgagaaattctttttgtcGGAAAGAGCCTCACGAAAGT
TTGGAATAGTGCAAAATAATTCCATGATTGAGGGAGAGGGGAATCTGACT
GAGAATGCGAAAGTATTGCCTGTCAAACTCGTAGTTCAGGTCGATGACCC
AAAAACAGAGTTATCAGAAAGAGCTAAGCAAATAGGTCTCAGTTGTATTC
GTTCGGTCGTTATAAAACACCCAGATCCTgaaaatccaaccattttttaC
GATTGTCCGTTATCTAAATTGGAAGGTTTGTTGGAAACGAATGAGAAAGA
ATTGAAACGGCTATTGGCTGAGCAACACCAAGATATTTCACCTGAAGACG
TTTGTCTTTTACACAATCGTGATTCAATAACGTCCACGAAGAACATCGAG
GGTCTTTTCATAGAGGGAGATAGTATCCAAGAAACTTTGGAATTAACGTT
AGAAATCAAACCAAATGAAGACGAGGGGATGCAAAGATTTTGTCGaaagt
ATGATTTATCTCCTTATAAACAGGTTATTATCAAATTTCTTACTGGAGAA
Coding sequence (CDS) from alignment at sc0000095_pilon:1059636..1061135+ >XLOC_035925 ID=XLOC_035925|Name=XLOC_035925|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3000bp|location=Sequence derived from alignment at sc0000095_pilon:1059636..1061135+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTCACCCTGATCACCAGATCATTAGAAGCCGTCACGAAGTTTTGAATGA
AGAAACTTTGTATATGTATGGTGGATTTGTTGACTATTACAAATTGAATG
TCGACATTACTGAGCCAAACTCATATCCCAATATCGTCAGCCAGCGGAGA
GAGGGTATTTGTAAGCAgatagaaatatttcaaattgaaatccCTCAAAT
TGAAATCCTCCACAATGATGAACACAAACCGaaaaaaaCGATGGAATTTA
AAATGAAACCGGACTTGACGATGaaagatttgaagaaaaaaatcggcAAG
AGCAATAAACTCGATGGTGACTTTATTGTGTTAAGCTCAAAGAAAAGTCC
AGGCGTACTTCTGGATGATGAGCAGTTGTTAGCTGATTTACTCCTCGACT
TAGATGAGGGTGAGTCACTCGAGTTGAATTTAAACATGATGGAACAAAAA
CCATTTCGTAACCCCCATTCTCATCATATGTTGCAACTTGTAAGGCTAGA
GCTTCCTTATTCAGATTCAAATAGGTATTCTAAGGTAGATTACCCATATT
TGGAAATCGGGCTTCTTGGTATTTCTGCTTTAAAGTCATGGGTCGAAGCA
AATTACGAAATACCTTGCGCAGAGCAGTTACCGACCTTAAAAgacctttt
aaaaaaatgtgaaatcaTTGAAAGTGAGACGTTCCCTGAACATCTGTGCA
ATAAAATAAGACTGGGCTGTATACAAGTAAAGCTTTTTGTGTATTCAACC
AGTGACAAAAATCTGACGTCTCTTTATCAGAAATTGGGAGTACAGACAAT
ATTACCAGTCAATGTATCCGGCTTTGGGACGTCTAACATTTTGCAATATC
ATTATCGAAAGGGAAAAGAGAAACTGGATGTATTCATCGAGAACTCGTTA
CAAATTCCGAAGCTCAAACAGCGACTTTTTGTAGATGGTTGTAGAGTAAC
GGCTAACGAtattgagaaattctttttgtcGGAAAGAGCCTCACGAAAGT
TTGGAATAGTGCAAAATAATTCCATGATTGAGGGAGAGGGGAATCTGACT
GAGAATGCGAAAGTATTGCCTGTCAAACTCGTAGTTCAGGTCGATGACCC
AAAAACAGAGTTATCAGAAAGAGCTAAGCAAATAGGTCTCAGTTGTATTC
GTTCGGTCGTTATAAAACACCCAGATCCTgaaaatccaaccattttttaC
GATTGTCCGTTATCTAAATTGGAAGGTTTGTTGGAAACGAATGAGAAAGA
ATTGAAACGGCTATTGGCTGAGCAACACCAAGATATTTCACCTGAAGACG
TTTGTCTTTTACACAATCGTGATTCAATAACGTCCACGAAGAACATCGAG
GGTCTTTTCATAGAGGGAGATAGTATCCAAGAAACTTTGGAATTAACGTT
AGAAATCAAACCAAATGAAGACGAGGGGATGCAAAGATTTTGTCGaaagt
ATGATTTATCTCCTTATAAACAGGTTATTATCAAATTTCTTACTGGAGAA
ATTCACCCTGATCACCAGATCATTAGAAGCCGTCACGAAGTTTTGAATGA
AGAAACTTTGTATATGTATGGTGGATTTGTTGACTATTACAAATTGAATG
TCGACATTACTGAGCCAAACTCATATCCCAATATCGTCAGCCAGCGGAGA
GAGGGTATTTGTAAGCAgatagaaatatttcaaattgaaatccCTCAAAT
TGAAATCCTCCACAATGATGAACACAAACCGaaaaaaaCGATGGAATTTA
AAATGAAACCGGACTTGACGATGaaagatttgaagaaaaaaatcggcAAG
AGCAATAAACTCGATGGTGACTTTATTGTGTTAAGCTCAAAGAAAAGTCC
AGGCGTACTTCTGGATGATGAGCAGTTGTTAGCTGATTTACTCCTCGACT
TAGATGAGGGTGAGTCACTCGAGTTGAATTTAAACATGATGGAACAAAAA
CCATTTCGTAACCCCCATTCTCATCATATGTTGCAACTTGTAAGGCTAGA
GCTTCCTTATTCAGATTCAAATAGGTATTCTAAGGTAGATTACCCATATT
TGGAAATCGGGCTTCTTGGTATTTCTGCTTTAAAGTCATGGGTCGAAGCA
AATTACGAAATACCTTGCGCAGAGCAGTTACCGACCTTAAAAgacctttt
aaaaaaatgtgaaatcaTTGAAAGTGAGACGTTCCCTGAACATCTGTGCA
ATAAAATAAGACTGGGCTGTATACAAGTAAAGCTTTTTGTGTATTCAACC
AGTGACAAAAATCTGACGTCTCTTTATCAGAAATTGGGAGTACAGACAAT
ATTACCAGTCAATGTATCCGGCTTTGGGACGTCTAACATTTTGCAATATC
ATTATCGAAAGGGAAAAGAGAAACTGGATGTATTCATCGAGAACTCGTTA
CAAATTCCGAAGCTCAAACAGCGACTTTTTGTAGATGGTTGTAGAGTAAC
GGCTAACGAtattgagaaattctttttgtcGGAAAGAGCCTCACGAAAGT
TTGGAATAGTGCAAAATAATTCCATGATTGAGGGAGAGGGGAATCTGACT
GAGAATGCGAAAGTATTGCCTGTCAAACTCGTAGTTCAGGTCGATGACCC
AAAAACAGAGTTATCAGAAAGAGCTAAGCAAATAGGTCTCAGTTGTATTC
GTTCGGTCGTTATAAAACACCCAGATCCTgaaaatccaaccattttttaC
GATTGTCCGTTATCTAAATTGGAAGGTTTGTTGGAAACGAATGAGAAAGA
ATTGAAACGGCTATTGGCTGAGCAACACCAAGATATTTCACCTGAAGACG
TTTGTCTTTTACACAATCGTGATTCAATAACGTCCACGAAGAACATCGAG
GGTCTTTTCATAGAGGGAGATAGTATCCAAGAAACTTTGGAATTAACGTT
AGAAATCAAACCAAATGAAGACGAGGGGATGCAAAGATTTTGTCGaaagt
ATGATTTATCTCCTTATAAACAGGTTATTATCAAATTTCTTACTGGAGAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000095_pilon | genome | sc0000095_pilon:1059636..1061135 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1500:1 |
|
