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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000339_pilon:88035..92721- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035878 ID=XLOC_035878|Name=XLOC_035878|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4687bp|location=Sequence derived from alignment at sc0000339_pilon:88035..92721- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGATAGATAAACATGTGAAATATTTCATAAGATGCTTGAATGCACT
TCCTGGAGCTTATACATCAATAGACACTAGCAGGTAAACGATTTACACTT
GTAAAAGCTTTACATTTTTACAGTTTCCTTATTCTAGTCCAGCCTACAGC
AAATCACTATAAAAGATGAGAGAGGGAAATGAAATATAGATTTTTTCATA
TGGCATGTGGTCTTTATTTTAACTTTGATTAATATTTTTATTGTTTTTTG
GTATCTATCTATTTATTAAGTGGCATAAGGCGTGAGCCCATAATCGCGAC
ATATAAAATAAATATTATTGTCATTATCTACAAGTTTAATTAAAATTAGG
TAGTTTCTGGAAAATTACTTTAGAATAAAAAAAATATTTTTATCATTTAG
GATGACAATCTTGTTTTTTGCATTGTCTGGTTTGGATCTCTTGAATGCCT
TGGATAAAATTGAAAATGATAAGAATAAGATTATTGATTGGATTTACTCA
CTGCAAATACTCCCTGGTGAAAATACAGGTAACTTTTGAAGTATATTTTT
AATAATACTAATCAACCCTGATGATGGAGTAACATGCAACTAAATTCAAA
GCGTACCCCAATTTGGTTTGTGTATGAATTGTGTTTTTTAGGAGAAATGC
TTCTTATTTTTTGTTCAAAGTTTGAAGGTTTTTGTTTCCAGCTTTCATAA
GGATGGGAACCCCTTTCTAGTACTTTATAGAAATGTTAACTATTTGAAAT
GCGATAAAGCATGGAGTTTGTTTTTCTTTTATATTTAGCTGATAAAGATA
CAAAGAAGTGTGGTTTTCGGGGGTCATCATTCCTTGGTGGTGAATTCAAT
CCAGATGTAATTCTTCTTTGATTATTTTTAATTTTCTTATTCTCAGAAAT
GTCTATTATTGTCAATTTGAAGCCACTGTATGTGAGGGCAAAAATTGATC
TATAAAGTGAACCCTGCAAATGTGCAGGGAAAATTTGGCAATATTTGTCC
ATTCTTTTTCCATTTTGAAGCTACATATTTGTACCTTAGCAAAATTCTTT
GATAAAAAGTTCGTTTCGGAAACCTGAAATGGCTAGACTTACAACAGATC
ACCTTGAATTACCCTATTTTTTGCTTGTATATGAAATCACAGAGTCTCAA
AGTCTATACACTATAATTTTTCTTAAATTTGAAACTAGATTTTACTTTTA
GGGTTGTTTTACAACATCAGAAATTTATGAAGGCTCCCATATAGCGATGA
CTTACACAGCACTTTTATCACTGCTTATATTGGGCGATGATTTATCTCGT
GTCAACAAGAAAGCTATCACTGAAAACCTAAAGTCACTACAACTCAAGAA
TGGGAGGTTTGCTTTACTATTATCTTTAGTGAGCCAGGTCTTGAGGGTTA
AATAAAATTGTATCTAAAGATAATTTGAATGATTTAAATAATTTTAATTC
ACAATTTCGAAGTTTAAAAAAATACATTACTTCAAGTTGCATGCTTTGGA
TATGGATATATGGATACAGATTGCCGTAAGGCATGAAACTTGAAGTACTT
TTTTTAACTTCAAAATTTTGAAGTAAATTTGTTGGTTTGCTTTACACAGT
TTATCACGAGCACTCTTTTAAATGATGTTTAACAATATATATCAATAATG
ATATAGAGCGAGCTATACCAATTGGCATTTTCCCTCCTACCTGGGTAATG
ACTATGCAGAACATCCAGCAACCCTCTAATATAGTGGTATATCTTGGTTT
CATATTCATACTTATCCCAGGCAATTTTTCTGTGTTTAAACAAGGACTTT
AGGGTGCACGACAATACAATGATTGGTATAAAATCGAACATGCTCCTGCT
TGATGGTATTTTTGAGGCCATTGTTACTTTTTTTTTTCAATTCATTTTTC
AGTTTCTACTCAACACCTGAAGGAAGTGAGAACGACATGAGATTTTTATA
TTGCGCTTGCTGTATATCCTACATCATTGATAACTGGAGTGGTGTAAACA
AGAAATTAGCTGTGAAATATGTTCAAAAAAGCATGGTATATAAAGTCTGT
TCCAAAGAAATTGACAGTTTGTTCTTTTTCAAACATTCCTCTTGAGGGGG
GGTCTAGCTGAAAGTAATACTTCGTTGGAAAGATAATTTTGACCGGCTTG
GAAGCAATTTGAAGATGAAATTGAAAAATTAAGAAGAAGAAAATGAAGAC
TTTCGCTACAGGACTAAAAACTTTTTTTTATATTTTTCTGAAGTTTTGAA
ATTTTAGAAGGTTCAAGTGGGCGATAAATTGCTTAAGAATGCTCAAAATG
AGCTTATCACAAAGGGCTATAAACTCTTAACACAAAATACATTTTAGAAA
TCTGAATACATTTTAGAAATCAGCGTGCTTCCAACGGTATTACTTTTAAT
TATAACATTTTTTCCTAAAGTGCAATGTTTAAAAAAGGACAGTCTGCCAA
TTCTTCTGGAGTAGACTTTAGTTTGAAAATAATCTATTGCAATAGTCTTT
AGTATGTTTTGATTCTTTTTTGAACAGCCAACCTCCAACTCCAGTCTTTG
TAAATATTCTATTAGCTCCTTATTCATAACTATTTCACGGTTGGGTACAT
AACCATGACATAACAAACATTAAACACTATACATTTTTAAGGCTACTATG
TTATAAATTTGTTCAATCTTAGGGTTATGATCATGGCATTTCTCAAGGAC
CACAGCTAGAATCTCATGGTAGGTGAATCTCTTGTATAACTAATAAAGTT
AAGTGCAAAAACTTTTCTAACCAAAACCTGCCACTCAAACCAAAGAAAAT
AGCCATGAAATTTATGAGACTCAACACAAAATATTAAAAAAAAATCTCAA
ATGAAGAAGTAACAGAAAGTTACTCATTAAAAAGCAAAGCAAGCAGAAAG
TAGAATATGAATTTTCGCTTGGATGATAAGAACCAAATCTAGTATCAGGT
GTGGTTTAGAGTAATCCTAAGCATAACGATTGGTTTAATAAGATCAGTAG
TCTTATTCCTGTAATTCCCCTACCCATTTTCATATACTCTCAATATTATG
TTGTCTGTAAAAAAAGTCAAATTGGAAGAGTTTCTCTTCTAAAATATGAA
TATCCTTTTATCAGACATGTAGGTTTCTGTCTCATCTATATCAGGAATAT
CAAAATTTTGCATTTTTTTATATTTCAACATTTCCAGGTGGCTCTACCTT
TTGTGCTGTAGCATCATTACATCTCATGGGAGAATTAGAAAATTGCTTTG
ACTGTAAGAAATTGGAGAAACTGAAGAGGTGGTGCTTAGTACGACAGAAA
AGTGGATTTCAAGGCCGCCCTAATAAACCTGTTGATACTTGTTATTCATT
CTGGGTTGGAGCATCTCTAAAGGTGACGTTTCTTAAATTTGAGATTCTCA
AGCGACCGAAGTGCAAAGGTACAGGGTGCGGCAAAAAAATATATAGTTTT
GTCAAGATATTATTAGCTGACGGTTTAAAGATTTTTCGTTGATTCTTTTT
ATTTATGCTATAGAGAACTTTAAGATCGGTTCAGTCAATCAAAAGTAATG
TTGAAAAAACATTGATTGACTAAACTGATTTTAAAGCTTCAATTCACCAA
AGTTTAAGTAAAGCTACCCTCTAAGCTTTTTTCACATACACATAAAATCT
AACATAAGACCTTTTGGAAAATCATTCGTAAGGCTGTCTTTTGGGAATTT
CCCTGACATTATGTAGAGTTTTTGTTGATTAAGAAACTTTTTGAACGTAA
GCAAACTCTACATGAGGCCTTAAAACACTACGTAAGCTTAGGGAAATTCC
CCACCCTTCAAGGTCTTAAGTAAAATTTTACGTACATGTGAAAAAAGCTC
TATAGAATAAAAAAAGAATCAACAAAAACTCTTTTACCGTAAGCTCACAA
TATCTTGACAAACCTGTATACTTTTTTGGTGCACTGGTAGAGCATTTTTT
GTGCGCAAGGTTGTAGGCTTAGTCCGCGGACCGGGTTATACTAAAAGGGA
AAAGAGTGGCCCCTCCCTTAACCTACGGGTAGATGGCTATCGAAAAAGGA
GCCCTTTGGGTTGCCTCCGACCGCAGTCGCAGACTTCTTTCTTAAGATTC
TCAGATACCTTATTATTATGTTTGGTCATTAAAGTGGAATCTAGTCTCAA
GTTTTCAAAGAAATGGAGCTAAAACTCTGACTCTCAGTTCGTTTGAAAAA
GTTAAACTTTTGTAACTGAAGATAACGAGTATCATTCAATTTCGATAACC
TCTTTCCATTTTAGCTTTTGGATTGCTTTCAATTTGTAGATATAGAAAAG
AATCGAGAGTTTTTGTTAACAACGCAACACAATATTACTGGCGGTTTCAG
TAAATGGCCAAATTATCACTCTGGTAAGAATGTTTACAACAACTTTCTCC
TTCTTCCGCGCTGATTGAGCATACAAATGTTGAGAAAGTGTTTTGTCTAT
ACTCTACTTTGTCAGCAGAAAGGCGCGCCATCTTTCTATATCATAACGAA
GAATATCCTTAAATAGCCTGCTCTCCTTGTTTCAATAGATGCACTGCATA
CCTATTTTGGAATTTGTGGCATGTCGCTTATGAATTTGTACAACCTCCAG
CCATTATCTCCTGCATTGAACATCAGCGAACGAGCACACCAACATCTCAA
GACTCTTCATAATACAAACACAATGGATATTTCTTGA Coding sequence (CDS) from alignment at sc0000339_pilon:88035..92721- >XLOC_035878 ID=XLOC_035878|Name=XLOC_035878|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2112bp|location=Sequence derived from alignment at sc0000339_pilon:88035..92721- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGATAGATAAACATGTGAAATATTTCATAAGATGCTTGAATGCACT
TCCTGGAGCTTATACATCAATAGACACTAGCAGATGAAGATAGATAAACA
TGTGAAATATTTCATAAGATGCTTGAATGCACTTCCTGGAGCTTATACAT
CAATAGACACTAGCAGGATGACAATCTTGTTTTTTGCATTGTCTGGTTTG
GATCTCTTGAATGCCTTGGATAAAATTGAAAATGATAAGAATAAGATTAT
TGATTGGATTTACTCACTGCAAATACTCCCTGGTGAAAATACAGGATGAC
AATCTTGTTTTTTGCATTGTCTGGTTTGGATCTCTTGAATGCCTTGGATA
AAATTGAAAATGATAAGAATAAGATTATTGATTGGATTTACTCACTGCAA
ATACTCCCTGGTGAAAATACAGCTGATAAAGATACAAAGAAGTGTGGTTT
TCGGGGGTCATCATTCCTTGGTGGTGAATTCAATCCAGATCTGATAAAGA
TACAAAGAAGTGTGGTTTTCGGGGGTCATCATTCCTTGGTGGTGAATTCA
ATCCAGATGGTTGTTTTACAACATCAGAAATTTATGAAGGCTCCCATATA
GCGATGACTTACACAGCACTTTTATCACTGCTTATATTGGGCGATGATTT
ATCTCGTGTCAACAAGAAAGCTATCACTGAAAACCTAAAGTCACTACAAC
TCAAGAATGGGAGGGTTGTTTTACAACATCAGAAATTTATGAAGGCTCCC
ATATAGCGATGACTTACACAGCACTTTTATCACTGCTTATATTGGGCGAT
GATTTATCTCGTGTCAACAAGAAAGCTATCACTGAAAACCTAAAGTCACT
ACAACTCAAGAATGGGAGTTTCTACTCAACACCTGAAGGAAGTGAGAACG
ACATGAGATTTTTATATTGCGCTTGCTGTATATCCTACATCATTGATAAC
TGGAGTGGTGTAAACAAGAAATTAGCTGTGAAATATGTTCAAAAAAGCAT
GTTTCTACTCAACACCTGAAGGAAGTGAGAACGACATGAGATTTTTATAT
TGCGCTTGCTGTATATCCTACATCATTGATAACTGGAGTGGTGTAAACAA
GAAATTAGCTGTGAAATATGTTCAAAAAAGCATGGGTTATGATCATGGCA
TTTCTCAAGGACCACAGCTAGAATCTCATGGGTTATGATCATGGCATTTC
TCAAGGACCACAGCTAGAATCTCATGGTGGCTCTACCTTTTGTGCTGTAG
CATCATTACATCTCATGGGAGAATTAGAAAATTGCTTTGACTGTAAGAAA
TTGGAGAAACTGAAGAGGTGGTGCTTAGTACGACAGAAAAGTGGATTTCA
AGGCCGCCCTAATAAACCTGTTGATACTTGTTATTCATTCTGGGTTGGAG
CATCTCTAAAGGTGGCTCTACCTTTTGTGCTGTAGCATCATTACATCTCA
TGGGAGAATTAGAAAATTGCTTTGACTGTAAGAAATTGGAGAAACTGAAG
AGGTGGTGCTTAGTACGACAGAAAAGTGGATTTCAAGGCCGCCCTAATAA
ACCTGTTGATACTTGTTATTCATTCTGGGTTGGAGCATCTCTAAAGCTTT
TGGATTGCTTTCAATTTGTAGATATAGAAAAGAATCGAGAGTTTTTGTTA
ACAACGCAACACAATATTACTGGCGGTTTCAGTAAATGGCCAAATTATCA
CTCTGCTTTTGGATTGCTTTCAATTTGTAGATATAGAAAAGAATCGAGAG
TTTTTGTTAACAACGCAACACAATATTACTGGCGGTTTCAGTAAATGGCC
AAATTATCACTCTGATGCACTGCATACCTATTTTGGAATTTGTGGCATGT
CGCTTATGAATTTGTACAACCTCCAGCCATTATCTCCTGCATTGAACATC
AGCGAACGAGCACACCAACATCTCAAGACTCTTCATAATACAAACACAAT
GGATATTTCTTGAATGCACTGCATACCTATTTTGGAATTTGTGGCATGTC
GCTTATGAATTTGTACAACCTCCAGCCATTATCTCCTGCATTGAACATCA
GCGAACGAGCACACCAACATCTCAAGACTCTTCATAATACAAACACAATG
GATATTTCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000339_pilon | genome | sc0000339_pilon:88035..92721 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 910-1056:148 |
| Aaloc | 799-906:424 |
| Aaloc | 616-798:1499 |
| Aaloc | 568-612:2016 |
| Aaloc | 436-567:2785 |
| Aaloc | 280-432:3487 |
| Aaloc | 214-279:3898 |
| Aaloc | 85-210:4287 |
| Aaloc | 1-81:4688 |
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