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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000058_pilon:1680814..1689951+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035839 ID=XLOC_035839|Name=XLOC_035839|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9138bp|location=Sequence derived from alignment at sc0000058_pilon:1680814..1689951+ (Clytia hemisphaerica_ch_hm2_pilon)
GGTGTAATCTACAAATCGTTCCGTGGTGAAATGAAACAGTGGTCTCGCAA
ACTACCGCCAACTGATGTAAGGCTCTTTCCCTTAAAAGCTCCTGCCCCCA
TTGCAACTCACTTTAAATGTTAAGATATGGCTCCTGATTCTAGTCCGATT
GTTTAGAATAGGAgcagggagtctatccccttttatAGTTTCGCTAGACC
TAGGAGATTGCATTCTGAGATGGAGCGCCTCACCTGCCTTCAGCTCCCAG
TAGCTTAcggcctagatcagattacgcAATCTAAACTCATTCGCTGATTT
GGcagtgaccggggatcgaacccacaacccttggatcgaacccacaaccc
ttggaTTACTAGGCGAATGCCTCAAATGCCTCGCAAATTTTGGTTCAGGA
ATCATTCCTCCACGATTTTTCTACATGGTCATATTATTTTCCGTACAAAA
ATATCAGGTTAACATTattcttttgtgcttaattgtagggggggtcattt
tgcaatttttcggataaaAATCATCCCAGTAgcattttataatgaccccc
cccccccattttaggAAATCTCTCTGGAAAAGTGCTAAAACCTTTATTTT
CCTGGCGATTTTTGGGAATatcaccccaaaatcacttATAATTGACTGGA
TTTTCTCCCAGAGTaccaaccccctgcttattccacccatCCCTatctac
aattaagcacaaaagagtataTATTTTGCacccaagaaaaaattttcatt
tcttccagGACAAAGATGTGATCGATAAACTACTGGAGAAAGAGGAATAC
AAAGGTAACCTCATTATTTAGGTCACCCCTTCTCCTACAAGTGTATTTGT
GTCAGTTTTTAAGCCtcgatctcaattaaaaaatcCAGGATCTCCTATTA
TAAACACAATTTTTCTTGTTCTTGCAGGCtcgatagagtcgatattttac
gtggatagcccagtaatctaggacttttagacaatcttttgattgttttc
acggggtccacaaCCAGCCGCCTCTGCTATATATCAATTGAATGAAACAT
TGGAAGGAGTGgggtttgagacgctgacgcgcttgaccacttggccatcg
ctcgaTATAGTATGAGGATGAAAGATTGTCAAAGTTTTTTGTCACACCCA
TCATATATCAAAGATTTTACATGTTTTtaccctttttttagaaaaagaat
tgaCGACACCATTCTTGTACTTGACCTTAGACATCCCTGCTTCCCCGCtt
ttcaaggtttgttttttgttgatcACCCTACACGGAGTCGTTTAGTAGAC
TGGACTATTTTGTAGAGTGGCCTATAAAGTCATTTTTGGCCCTTTCTCGA
AAAAATGATAGTTTCCTCCACTTAGTTTGATAGTCTAAAGTTCAACTttg
gggaagaaattttcgcaaaaCAAATCTCTCTGCACATTGAACTCGGTTTG
ATTACAATGAAGTGAGATTCAAACTCGCGACTTTCGTTTTACTGCTCTAC
CGACTAAGCTATCCAGTTCAAACTGGAAGCACATTTTCGACGTTTTGGAC
TTGATTACTCCAGTAGTAACCACGTATAGCATGACATGAACAACGCTACA
CTCTGTGATGCCATAAGCGATTCCAATGACATTGTGcgtttcgatatttt
ttaaacaatattaTGATCACTCCTCTAAAAGTGAATTTATGTCACTAATG
GGTCAAATTTAAAATCGATACCACCGATTTTTAAGCTCGATACTCGATAC
AAATATCGatagttttgattgttttgaacttgttttCCGTTTTCCGATTT
TGCACAAACTACTTTTAATCATTTAGGATCAACATTTAATTTATTGGAGA
TAATCTTTGCCTTTCAAAAATGAACTTTACTCACTCCTATTTTCgtgttc
ttttcaaaattgaacCTTTTAAAAACGCCAAATAATTTTTATCTAAACAA
GCGGTCCGTTTAACCCTTTTGTACTTCatcatttattttgatttcgaCAT
TAACAATTATGGTCCACAAATATAAAGTATTGTTAGGGCAACGCTTTGTC
CCTATGGTACTTGTAATATAAAAACTAAACTAGAAAATTCACAACTTTCT
TCAAGGTACAAATTAACTGTCTGTTTACCTCGAACTCCAtttttttGACG
AAGCACTTTCTGGTTTGTTTGTCAGATCCGTTATAAACGGTTGTTGCAGT
AGCTCTCAAACGGGATGCTGTACCACAATTTTCTGATCGTTCTacaaata
ttggtgaaaatccAACAGGTGAACGCCAATGAAATTCCTTTGACTATTCG
GAGTATCGGGTTATTCTCGATCTGCGAGGGAAAAGATCAAAGTACTGGCT
CAACAAATTTTAGTGAATTCAATCGTGTAGCAAAACATCTGCGGTATGTA
TGGAGGGCATGGATGGTTGCTGAAGGAAACATATGGAAAGTGAAATCTCG
TATGACAATACATTACCAGGATGTTGATGTGTGCCATAACACTACCTTAC
TGATGAACACTTTTCTTGATTTAATGCTCGATGAAGCTTATTTCTCAAGG
TTGGAGGATAGGATAGGATCTTCGAtagccgccatctttgtttacacGCC
TGAACCCATGGTAAGGCTCCTAGAATCTTGGGTGCATGGTATTCCTGTTT
TCGATACGAACATTTTAGAAGGTTGGTGGGAAGAAGGGTCACACAAGTAT
GCTAGATTACTGGTCGAACTTTGTGAGCGTTTTCAATGGGAAAATGTTTT
ACTGATCCATATAAAAAGCCCATCAgatatttatgaaaaatatttcacga
GCAGTATTCGATTTTTCAAGCGTAGACGATTTTGTGTACACTCGATCAGT
ATTGAACCTACAATAGTCATAGAAAGTGAAACAATGATGACAAAAGAATG
GCTGGGTGGGCAAAAACCAGCGGTCATTTATTTCGGTGGAAAAAATGAAG
TAACACAACATGTCGAAACCaatttggagatttttcaaagctcgattatA
AGATTACCGATTTTATGTCACGATATTGATATTCCAGACTACAACTTGGA
TTTTACAGTTGTCAAACTCTCAGATATGTTCAGATTTAGATTAGGAAGGA
CTCAAGTGGCGATTTCAAAATTGAATGCATCAGTCTTGCCAGCTCATATC
CGTCTCGGAGTTTACAGCGTAACAGAAAATAGTTTCGCTaatttccttta
ttttcttACAATATACGACAAAGACGGAAATGCTACAACTAGATTTAATA
CTTTCCTTCGGGTAAGACAACAAGTTTCCGTTAATGCGATTCCCGGCGGA
CTGTATTGGGtttttttCAGCTTACACATATCGAATCGTGTGCGGTTTCG
TGCTGGAATAACATTCAATCATAATTATGACGAATTCGAGTTCAAAAACT
TTAATCGGAATCAAAGTAGACTTCTCAATAGTCAGAATCAATCAGTTATC
AAGTCAGCTTTTTGTCCTTCACTGACTTGCTGGCCTGGTTTCTATAAAAC
ATATGGAAATGTAAGCAATGGATATACTTGGAAGTGCGAACCATGTCCGT
TCAATCATTTCAAATCTGTTTACGGGAATACCGCATGCGAACCATGTACC
GGGAAGCTGAGCATGAGCAATGCAGGTCGAACTGGTTGTATAGATCCCTA
CACTGATTTACCATTGCAGCTGACTTCCGAGAAGATCTTTGTCATTGGAA
TTTGTTGTGTGGGAGCCGTTGGGACACTGTTGACGCTTATAGTTTTTATA
AAGCAGAAAGATTCACCTATTGTATCACTCTCTGATTTTAAACTTTCCGT
CGGACACATGTTGTTGATTGTGTTTATTTTCGGTACCGTAATGTTGTCAT
TGCTATGGCAACAATattatttcaaacatttttgtttgACTAAAGTTTTG
TTCGTAAGCATTACCTATGTTTTTAGTGTCAGTATTGTTTTCATCAAATC
GCAAAAATTGTTACAAGCATTCCTGAGCAAGATTCGCCTGACCCGTGAGG
AGATCAAACGAACCATCGCGACCCAAATCTTTACCgttctcttatttctc
attgcTGTAAATTCATTTTTCGCCGTCTCAGCCTATCaacgaccaatcaa
attgctgGAAATCACTGACACGGTCAAGATGACCCGTCAGTACGTATGCA
ACACATCTTACCATCTCAGATTTGTGATCATTCCAACTATGGCTTTACAA
TTATTATGTTCTGTTCAAGCTTTCAGAGGGCGTAATTTACCAAGTGTTAT
GAATGACGGCGTAATTCTTACATACTCTACATTCATACTGACCGTAGTCT
TTGGGGTAAACTTCCCAATCGTTTATTACCAAGTCGAGGCTGATAAAGAG
ATCTTTCAACTTGGAGCTTTGGCTCTTAATAATTTTATTATAAGTTTTCT
GATGTACGGACAAAAGGCGGTTCGCATGATCGTTTATCCGAAACAAAACA
CGAAAGCATACTTCAGGGAACAACGTATGGCTCGCGTTAATCAAAACATT
TCTGCGCTTTAAAACAAACAGTATATGAGAAAAGTTGTAAATATTACTTA
ATAATAATAGGCAATAATAACGTTTATTTACATCATAGTTTTCATtgaaa
tatcgagtattgcagtATATGTATATGTTGTATATGCTTTAATTGTGTGA
AAATTGATTATCCAGGCCCATGGTAGCGACTTCTATACAATCTACATGCT
CCCTTacttaagttttttttgaaagtgttagAATAGAGATATCTCTACAT
TTCGTATGCAGAACCAGCATCGTCCGGACAACACTTTACCGTACCAATTA
AGAGAGCTATTATTCAAGCTCGACTGATTTCTAATCTCAATATAAAgagt
aaaaaaatatcaattaacGATGAAACATCAACAAAACAAATCGAAAGCAC
GACTAAGAAAATCTGACTCCGAAGTCAATTTGGCTGCGAGTCCAAGCTTT
ACACAAGAGCAagtaaattttggatgtttttatttttcttgtgatttttt
ggcttgcatgtttgtatatagaattttCTCACTGCGCTCTTACTTAAATT
TACTAATCGAAGCCATTTGTGAATCCAATTGCTCTTAATTTGTGCTATAA
AGTTTGGTTAAAACTGAGCCTCTtgtgttcttaaaaaattggtCTTGTAA
GAGAATCGGGTACTGCAACATTTTGACATGAAGTAACGTTGGACGGTATT
TTTTAATAGACAAAGAGGGTATAGGTAATGGAAATATTGAGGTAACAACG
ATGTAAGCCAGTGGATAGCCTATAGCAAACTATGTTTTCAATACCAATCA
ACCACCtaattaactttttgattttggagcaTTATTATTACCAtactaaa
atattattttttgtctGTCACGCCAATTATGCAAATGGTAGCAAAAAGTA
GTTTTTTGGTCTTCCAGGGGGTTAAGATTAAGTAATTTCGTTTAAGTGTA
TCTCAAGTATTCGAACCaggttttattttaatttgaagatctttcaaccC
TTCATTTTTATAGTTAATTTTATTGATTGATCTTTATTGATTTTAGGACC
AGTTAGAACAAAACGCAATTCCACAGGTAACAGATTGAACGTGATTCCTC
TGACTTTATCTTTCCGACACTTCACGAGGCCCTGAACTGGTTTTGCGGCC
GGCCAGTGCCAATAAATTTCAAAGTTACCATGGCAATCCTTCGTTGTTTG
ATTGTCTTGaccaaaagttttttaaattcatcaaaCAACACTTTTACAAA
CTTTGTGaacttttcattgaaaaatctaaaagttttggCATTACTGATGA
TAGAAGAATGACTGAATAATGTATAATCATgccaaaattcatcaaaatgt
tgtttttttttctctcgattggtgccaattttcttttttttgtgaaaaag
tttcCCGTTGCTAGACggaaactaaaaaaatttcgattgcCAACGGTAAC
CAGCGAAACTCTGTGAATTTGCCTCTCTCGGCAAAAAGTTCCTCATTTTA
ATATAATGTTACATTAGTGTGCGAAATTTCAGACCCAAAATGTAATTTGT
AGTATTCTCACGCTAAGCCACCCCCTACTATAATGATCtttaaaaatgaa
tgttttcaGGTTCCATTGCTGAGCTTGTTGCAGAAATTCAATGGCCACCA
AGAAAAGGTATATAACGCGAACAATTTAAATTGACGCCAATGCGCGTTTG
CCAGGCCTGTAACTTTAGAACGGCATGGCTGCCATACAAATGTTGCTGAG
GACCCCCTCCAACCTGTTTTTcacttcaattctttttctgaacCCCTCCT
TCTctgacgaacgtactttttgaatgcccCCTAGCACAGTAATAACATtt
gtgttatatgataatacaaaAATTGTAGCAAGAAAATATCAGTCTAAATG
AATGAACTATAGACTACAATTTATCCCTTCCATTATATTTTGCTGGTTTT
GTTTaaacatagtccgtataaaaaccccggtctggaagtcttttgtttct
tacttgaacttgcgtttgagaaattagtttgttttgctcgtattttgatc
atgtgatcaaatcttaaaccaatcccaagaggaatacttggtaacgtgat
caaaactgagcaaatcggtAATCCGTTGGTAATCTTTTAAtcttaacaaa
ggaaaaagctaacaaaatgttaaaacaataagcttccagaccagagtTTT
GAATAAGTAGTCTATTATACTAGACTAAATTTTCAGTGTTACAATTGAAT
TATTTTAGGACTATAAAACGTACTATGATACCACAATGAAAAGATTCAGC
TTGACAAAGTTACCAAAATATCTCATACTCTTTATAAAGGTAAGAATTAG
ATAATTTCTTTATATCCTTTATTTGGTATACAGGAGATCGTAAATTGAGG
ACGAGTTGATAATTTATGTTTTCCGGAAACTTGAAATCGCCTCCATCCAA
TGAAACCTTTAAAtactttacacgttttttagaaCATTAAATTGAGACAT
AACAAgacatttaaaattcaaaaagattttataagaCTTGAAAAATGCTA
AGTAGAAACAAGGTAAACTGTATTTTACAACAAAACTACTCCTCTATCCC
AACGAAATCTCCATCTCAATCTGAGAATCAGACTTTGCACTTCTGCGAGA
TGACCTTTTTAACTGAAATGGATGGTTCTATTAACAATGTGTATTTTTTC
TTAACGTTAATAAGAACAGCTGAAGCTGGAATTCGATGAAAAAATAAGCA
CAACCCATCTCAGCCAAAATTAAAGCGTTCTAATAAAGATATATGCAATC
TTTAGAGTCTGTCAAATGTTTGACTATTTAACTTACTCAGATCGTTTCAG
TGAATGTTTAAGCCTCCCTTTCAATgaggaatgaaaaaaattcatgttTC
ATTATTTTAGCGTTTCAACAATAACACGTTTTTTGTTGAGAAGAATCCGA
CTATCATCAATTTCCCTGTCAAGTGAGCTccctattttcattttttttta
tatctctTTTACACCCTTTTACGTATCACAAGCCTCACTGGAaagtttga
ccaaaatttcgtccccggttgGAAAATTATCTTACGATTCCAGccctact
gggaaattgactttccTCTATATTTTCATCCCCGTTTGAAATTCATTGTA
AGAAATTGCACGTTAAAACtattcccactggattttctttagcttggaac
aatagaatttctatcccattgggattttagCAGAAATTCTTATCACCGTT
TTGGGAAAAAAGTtgcaccgggtctgtgacacatgggTGTACTTGTCTGT
ATAATTGTAATAAATAtaaagtatgtttttaaacaaaattagtttcaaag
ttACAATAGTTTAACTATATGCTATATATATTTTGTAGGGGTTTGGACAT
GAAAGACTTTTTATCCGAAGACGAAGAAGTCCAAAAAGCACACCCACACA
CATCATACGATTTAGTTGCAAACATTTCACATGAGGGAGAACCAGGTTTG
TACGAAAGCCTGCATTGCAACCATCGTTTGACGTCCACAACGTCTATATT
TTTTGGCGAGAAATACTTATGCTCGTGCATGCAGCCTTAGCCGGACCATT
GTTGCGACGatttgatcaaagattttttttgccaaaatcacGTGTCGCCA
ATCCCACCGCTTTCTTTTTTCCCagtttctttttcgaaattctatcaata
atttagaaaattctttaaaagcAATTGTGACTTCACTTTATTGGATTTTT
GTTTATTGCAGGTCAAGGTAAAGGGACCTACAAATTGCACGTTTTACACA
AAGGCAACAAGCAATGGTTTGAAGTACAGGATTTGCACCTCAAAGAAATT
CTACCTCCTATGATTACACTGTCGGAAAGCTATATACAGGTACTTTATTC
TCCGGGTGGGATGGGGGTGGTACTAGGTTTGCCAGACGGCGGGTGAGTTC
CgcccaattttttgaaaatgatcgGAAATACTGTATCTAAAATGCCTAAA
GGTTAGAAACTTTGAGacacttacacgttttttttttaataagaaacctt
aacttggctccaagcctggagttccttagttttcaagagaatttCAACCT
CAAAGTTCCTTctcaagttccttatttacttagCTGGTAAGGTTGGACTG
ATTTGATGATTTATTGAACAATTGACAAAAAGACGAACAATTGAACgtta
ttttatcaatattttatcatttttttgtttaggattttttataaatgtgt
GCAAGTTCAATTTGAACTCTCGGTGTTCCTTAActcgttttctttttctc
agcctgagcagttcctttacaatttccttatttttcggaCCATTCTCacc
ctcaagttccttataaacgtttcctttataaaaaaagacgtgtattgGAA
CTTATTTACGATCAGAGGGGTTGCGAAATGCATTGTCTATGAATAACCCT
GGTATTTCTTTTCTTCCTAATCCCCCGACTTTATGCGTTTTCGCCCAGCT
TCACTATTGGAAGCAAAGTCACTTTTTTCTAGTGAATACCAATCTTCAAA
CATTTCTCATTCTAAGGAAGTaacccattatgaaatttttccgTTTCAGA
TCTGGGAACTACAAAAGCCAAAACCAACGAAAACGTGA Coding sequence (CDS) from alignment at sc0000058_pilon:1680814..1689951+ >XLOC_035839 ID=XLOC_035839|Name=XLOC_035839|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1344bp|location=Sequence derived from alignment at sc0000058_pilon:1680814..1689951+ (Clytia hemisphaerica_ch_hm2_pilon)
GGTGTAATCTACAAATCGTTCCGTGGTGAAATGAAACAGTGGTCTCGCAA
ACTACCGCCAACTGATGGTGTAATCTACAAATCGTTCCGTGGTGAAATGA
AACAGTGGTCTCGCAAACTACCGCCAACTGATGACAAAGATGTGATCGAT
AAACTACTGGAGAAAGAGGAATACAAAGGACAAAGATGTGATCGATAAAC
TACTGGAGAAAGAGGAATACAAAGaaaaagaattgaCGACACCATTCTTG
TACTTGACCTTAGACATCCCTGCTTCCCCGCttttcaagaaaaagaattg
aCGACACCATTCTTGTACTTGACCTTAGACATCCCTGCTTCCCCGCtttt
caagGACCAGTTAGAACAAAACGCAATTCCACAGGACCAGTTAGAACAAA
ACGCAATTCCACAGGTTCCATTGCTGAGCTTGTTGCAGAAATTCAATGGC
CACCAAGAAAAGGTTCCATTGCTGAGCTTGTTGCAGAAATTCAATGGCCA
CCAAGAAAAGGACTATAAAACGTACTATGATACCACAATGAAAAGATTCA
GCTTGACAAAGTTACCAAAATATCTCATACTCTTTATAAAGGACTATAAA
ACGTACTATGATACCACAATGAAAAGATTCAGCTTGACAAAGTTACCAAA
ATATCTCATACTCTTTATAAAGCGTTTCAACAATAACACGTTTTTTGTTG
AGAAGAATCCGACTATCATCAATTTCCCTGTCAACGTTTCAACAATAACA
CGTTTTTTGTTGAGAAGAATCCGACTATCATCAATTTCCCTGTCAAGGGT
TTGGACATGAAAGACTTTTTATCCGAAGACGAAGAAGTCCAAAAAGCACA
CCCACACACATCATACGATTTAGTTGCAAACATTTCACATGAGGGAGAAC
CAGGGGTTTGGACATGAAAGACTTTTTATCCGAAGACGAAGAAGTCCAAA
AAGCACACCCACACACATCATACGATTTAGTTGCAAACATTTCACATGAG
GGAGAACCAGGTCAAGGTAAAGGGACCTACAAATTGCACGTTTTACACAA
AGGCAACAAGCAATGGTTTGAAGTACAGGATTTGCACCTCAAAGAAATTC
TACCTCCTATGATTACACTGTCGGAAAGCTATATACAGGTCAAGGTAAAG
GGACCTACAAATTGCACGTTTTACACAAAGGCAACAAGCAATGGTTTGAA
GTACAGGATTTGCACCTCAAAGAAATTCTACCTCCTATGATTACACTGTC
GGAAAGCTATATACAGATCTGGGAACTACAAAAGCCAAAACCAACGAAAA
CGTGAATCTGGGAACTACAAAAGCCAAAACCAACGAAAACGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000058_pilon | genome | sc0000058_pilon:1680814..1689951 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 934-972:9100 |
| Aaloc | 808-933:8264 |
| Aaloc | 700-804:7890 |
| Aaloc | 637-696:7411 |
| Aaloc | 556-636:6759 |
| Aaloc | 508-555:6110 |
| Aaloc | 478-507:5547 |
| Aaloc | 415-477:1194 |
| Aaloc | 367-411:759 |
| Aaloc | 301-366:1 |
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