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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000194_pilon:405747..410083- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035826 ID=XLOC_035826|Name=XLOC_035826|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4337bp|location=Sequence derived from alignment at sc0000194_pilon:405747..410083- (Clytia hemisphaerica_ch_hm2_pilon)
ACATTTTCAACAACTTCAAATGAGAACGGAGAAGCACCATCAACTGCTGT
CTCCTCCACTGAGTGTATTTTGAAATGTAAAACTACTGATTCTTCAACGA
CAGCTTATTTTGTTGAAGAAGTATCGAAATGTTTTTGTCTTGTGAATGAA
ACTCAAGATATATTTTCCAATGATATCACGATCAATGGGACGCTGTATAA
GCCAGAACCTGTAAGTAAGACGAAAATTATTCACCTATCAACCTTGAAAG
TGCGAGGAGACTGGGTTCGAGTTTTAGGCCATGTTCAGACGTTATGGTTC
CGTTCCGTTCCGAAGCAAGTGTGAACGTCAAAATTCGAAACGTCAAAAAA
GAAGACGTTACAAAGCAAAACGGTTTCGCTCCACTTTTTTCATCGGAACG
GAACTGCTCTGTTTTCTTTCTCCGAAACATTCCAAAACCAATATGAGCAC
ACTCGATTTGTAACGAGAATCATACCGGAGCAAAACAGAACAGTAACGTG
TGAACTAGCCTATCTATATCCCAACACGCGATTTTTTTATCACCGGAACG
GTGTCGAGGAAAAAGCCGTGGTCGTCTGGCGTCAAAATGTCTGAAGTCGT
TGCACTAAGACAATGTTCAGATGTTACTGTTCCGTTTCGCTCCGGTTTGA
TTTTTTGTTACGGATCGAGAGTGTTCATATTGGTTTCGAAACGTTTCGGA
ACAAGAAAACGGAGCAGTTCCGATGAAAAAAGTGGAGCAAATATGTCTCC
ATTTATTTTGCTTTGTAACGTCTTCTTTTTTGACGTTTTGAATTTTTGAT
GCTAACAGTCTTATGGCTCCCGAAACAGAGACGGCCCCCAAAACGGAGGT
CGTCATTAAAATGAGGATTCTAACCCGTAGATTTATCAGACGTCTAATTC
TGATTTTTGCTTATTTTGAAAGAATGATGATTATACTTAAAAATGAGCAT
GTTTTTGATGGTTTGAGACGGATTCAAAATAATATATTTGTGTCTGAAGG
AAATATTTAAACACCAAAATTAGATAAAAATTGCATATACCTCATTCTAG
CTCCTTGGATAGTGAAAATAAGTTATGAAAATGGGGTATAGGAAACTTTC
TACACCTAATGCAAAAACGGCAAATTCCGTCATTTTTTTACAAAATGTAG
GAGAAAAATACCTTTAAAGCTTATTATTTTCAGTTTCAGTTAAGCTGTTT
TTCTAAAAATTTCATAGCATCTTCCATACATGAATGGAACTATTTTCAAA
AGAAATTTGATTAAAATGTTGTTAAATCAAAATTCTCATTTCGAAAATTT
CTAAATTTTCAGTTTGGATCATCTTTGCATCATCGAAAATCTTGAAATAT
TTTATAAAAGTCATAAATTTTACATCCTTCGGCTTATAAATTTAAGGGAA
AATATAAATATGTTCATAGTTTCTCCCCCTATTACCACTGGGCTTGATAA
TTTGATTTTAACTACACCTACGTTTTGGGGGCCCCAAGCCTCCGTTTTGA
CAACCAGGAAGTATACTCTAAAAATTTTATCAAACAAACTAATGCCCAAA
ACCCTCTAAATCATATTTCAAAACTATGGTCAAAATTTTGTATTCATATC
TTAAAGATATCTCAAGAAATCGCTAAAATTGCAAACCTCCGTTTTGGGAG
CCATTAAAAAAAGCTACCTATCTTTAAGCGAATGAAAAATATTGCTGAAA
TTGAAAATTTTGAAAAAAAACTTATGGGAAATAAAGTAGAGATGTTAAAG
TTTTTCATGGAGCAAAAATTTTTGTAAAACGTCTTTTTCTTTTGATTTGA
GAGAAATTTTAAATTCGATCGACGTTTTGGGGGCCACATACTGTACACTT
GTTTATTCGGACCCGTTTCGTTTCGGAGCGAAATGGAACCGTGACGTCTG
AACGTCGATGGTCTGAACATGACCTAATTCTCAAAGACAACGAATGTTGA
CGTCATTACGTAACGTGTACCTTTGAAAGCTCTCCCACACAGTTAGCGCA
GTTTTTAGTTCGTCAGAACATAATTATTTTTACTCTCATTGATTATTTGA
TAAAGAAAACTTAGCCTGTGGATCTCAGGGTTAAAAAATTGTTTTTCGTA
CGTATCAAAATAAAAGGCTTGAAGTTGCTTTTCTGACCAAGTTTTTTTGC
GAGCAAGTGAACCAAAAACAACGTCTGCGTTAGTTTTGTTGCTTAGATTA
GTCATCAGACAAAATTTCCATTTTTTATTTGTAATGGAACGATATAACTG
TTCTTTCTTTAGAAAATGACATCATGCGGGCAAGTCAAGGACAGATCTCG
TTTCTCAACAAACCCTGAAACAGGTTTCTACACACTTGACAAAGACAATG
TACCAACTGACGTATTCTGTGATTTCACAAACCAAGGGAAACCTTCTTGT
AAACATCTGAAAGAATTTTGTCCAACTTGTGCATCAGGATTTTACACTTT
TGAAATCGAAAATGAATTGAATAAGGTTTATTGTGAAATGGATGTCGATG
GAGGTATGAAGCATATGCATTCTTATCTTTTAAGCTAAAACACAACGTTG
TTGCAAAATTTGTCACACATTCCCTTAACTCTTTCTAGACGTGTGGGCCA
ATATTCTGAGTTTTTTTCTTTTTTCAAAAAGTGAAATTTTCTCTCCCGCG
AAGGGTTAATATTGCAATAGATCAGCCACTCTTCCAACCTCGTTCCCATG
TATCTCAGACTTTATTTACGTTACTGGTACGCATAGGCCTTTTCAAAAGG
TATGTTCCCAAGTTATTATTTTCAAGATGCTACCTTGGGATTTTCCAGGT
ATTTTGAGGGTAACCTTTCGGAACGGAAAGATTTGGGAGAACAACGGCTG
GCTTTCTTGTTTTTTTTTGTCCATTGAAGTGCTCAAAAGATCATCCATTT
ACAGGTTACATTTTTCATTCCCCCTCTGCGAGGTTTGGCCTCACACAAAA
ATAAGATGAAAAGTCAAATCAATCAAGTCAACTCCTTTATGTACGTTTTG
GAAGCAAGGTAGATTGTATCACAGACCTGTCGCAGGCAAGTGATATCTTC
ACCCCTGTATCACAGACCCGCTGAAACCCCAGCCCCACTGGAAAATTTGG
AAACAATTTCGTCCCGGTTGGGAGAGTACCCTGGAATTTCAGCCCCACTA
GGAAATAGACTTTGATTTCATACCCATTCGAAATTCCCTGCTCAAAAACT
GCACTCCAAAACCATGCTCACTGGATTTTTCAACAATATAATTTCTATCC
CCATTGGAATTACACTAGGAATTTTTATCCCACTAAGGAAAAAAAGTTCC
ACCGGGGCTGTGAGACAGGGTATCTATAGCGAATACGAATTCAGCTTAGG
TTGAAAACTTTATACACAGTAAAGTAATATCATCATCCATTATTTCGATA
CTCTTCAAGGTGGCTGGTTGATGTTTGGAAACTTGGAAATCATCCCAGAT
GCAACATCTTTAGACTCTGCTAACGATGCTGTTCAAAACCCATCATCTAT
ATCTGAACTTCAAAATGTGCAATCGGGATCTTTCTACTTGGCACCCACAG
AACTCCAAAAGCTTTACAAATCTTCTGGATACAGTGAAATGCGTATTATG
TGTTACAAAAAATGGCATATGCGGACCCTAGATGTCGTTTTGACTGGCCT
TAAATTCGTTGACTGGATGGTTAGTGGTTTCAAGAAAACTGGATTGTGTG
GTGATGTGCGATTTCTACCAATGGATGATTCATTCACATCTGTTCAAGCT
TGTTCTGGATTGAAATTCGGTGGAATTCATCTTATTTATGAGCCGAACCG
ATACCACGTGGTCCTGGGATATCATGGCACGAAATGGAGCTGTGATGATT
CTAAAGGGAATGCAGGTTATACTACGGCTGGCAAGTGGGAGTTGTACGTA
CGCTAGTTGAACGGAATTTCTTTTCGTTTTTACTTGGATTTCTCATTAAA
ACCTATTTTATATGATTAGTACATCCTGTTACATGCTATTTTCATACAAT
CCTGTTTAGATTTCAACTCAAGAAAGACAGAAATCGATTTTTTGATATCA
TTCAATTGACTTGGAATCTGTTCTAGCAGTGCCGTAGGAAGCATTTTCAT
ATTGGGGGGCTGAAGTTTAGTGACACCGCGAGGGCCAACCATGGTTTGGC
CCGAGGAGGGAAATTTTGAAAATTGAGCTCTAGATTGCTTAAAAATACAC
TCAAAACAGGCACTTAAAAAATGATTATGACAAATTAAAAAAGAAAAACT
TTGCATTTTGCAAAATAACCATTTTTGCCCCCCCCCCCCCAGTTGCTACG
GCACTGTCTAGTGATCGTACCTTGGAAAAACTTATAA Coding sequence (CDS) from alignment at sc0000194_pilon:405747..410083- >XLOC_035826 ID=XLOC_035826|Name=XLOC_035826|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1892bp|location=Sequence derived from alignment at sc0000194_pilon:405747..410083- (Clytia hemisphaerica_ch_hm2_pilon)
ACATTTTCAACAACTTCAAATGAGAACGGAGAAGCACCATCAACTGCTGT
CTCCTCCACTGAGTGTATTTTGAAATGTAAAACTACTGATTCTTCAACGA
CAGCTTATTTTGTTGAAGAAGTATCGAAATGTTTTTGTCTTGTGAATGAA
ACTCAAGATATATTTTCCAATGATATCACGATCAATGGGACGCTGTATAA
GCCAGAACCTACATTTTCAACAACTTCAAATGAGAACGGAGAAGCACCAT
CAACTGCTGTCTCCTCCACTGAGTGTATTTTGAAATGTAAAACTACTGAT
TCTTCAACGACAGCTTATTTTGTTGAAGAAGTATCGAAATGTTTTTGTCT
TGTGAATGAAACTCAAGATATATTTTCCAATGATATCACGATCAATGGGA
CGCTGTATAAGCCAGAACCTAAAATGACATCATGCGGGCAAGTCAAGGAC
AGATCTCGTTTCTCAACAAACCCTGAAACAGGTTTCTACACACTTGACAA
AGACAATGTACCAACTGACGTATTCTGTGATTTCACAAACCAAGGGAAAC
CTTCTTGTAAACATCTGAAAGAATTTTGTCCAACTTGTGCATCAGGATTT
TACACTTTTGAAATCGAAAATGAATTGAATAAGGTTTATTGTGAAATGGA
TGTCGATGGAGAAAATGACATCATGCGGGCAAGTCAAGGACAGATCTCGT
TTCTCAACAAACCCTGAAACAGGTTTCTACACACTTGACAAAGACAATGT
ACCAACTGACGTATTCTGTGATTTCACAAACCAAGGGAAACCTTCTTGTA
AACATCTGAAAGAATTTTGTCCAACTTGTGCATCAGGATTTTACACTTTT
GAAATCGAAAATGAATTGAATAAGGTTTATTGTGAAATGGATGTCGATGG
AGGTGGCTGGTTGATGTTTGGAAACTTGGAAATCATCCCAGATGCAACAT
CTTTAGACTCTGCTAACGATGCTGTTCAAAACCCATCATCTATATCTGAA
CTTCAAAATGTGCAATCGGGATCTTTCTACTTGGCACCCACAGAACTCCA
AAAGCTTTACAAATCTTCTGGATACAGTGAAATGCGTATTATGTGTTACA
AAAAATGGCATATGCGGACCCTAGATGTCGTTTTGACTGGCCTTAAATTC
GTTGACTGGATGGTTAGTGGTTTCAAGAAAACTGGATTGTGTGGTGATGT
GCGATTTCTACCAATGGATGATTCATTCACATCTGTTCAAGCTTGTTCTG
GATTGAAATTCGGTGGAATTCATCTTATTTATGAGCCGAACCGATACCAC
GTGGTCCTGGGATATCATGGCACGTGGCTGGTTGATGTTTGGAAACTTGG
AAATCATCCCAGATGCAACATCTTTAGACTCTGCTAACGATGCTGTTCAA
AACCCATCATCTATATCTGAACTTCAAAATGTGCAATCGGGATCTTTCTA
CTTGGCACCCACAGAACTCCAAAAGCTTTACAAATCTTCTGGATACAGTG
AAATGCGTATTATGTGTTACAAAAAATGGCATATGCGGACCCTAGATGTC
GTTTTGACTGGCCTTAAATTCGTTGACTGGATGGTTAGTGGTTTCAAGAA
AACTGGATTGTGTGGTGATGTGCGATTTCTACCAATGGATGATTCATTCA
CATCTGTTCAAGCTTGTTCTGGATTGAAATTCGGTGGAATTCATCTTATT
TATGAGCCGAACCGATACCACGTGGTCCTGGGATATCATGGCACAATAAC
CATTTTTGCCCCCCCCCCCCCAGTTGCTACGGCACTGTCTAGTGATCGTA
CCTTGGAAAAACTTATAAAATAACCATTTTTGCCCCCCCCCCCCCAGTTG
CTACGGCACTGTCTAGTGATCGTACCTTGGAAAAACTTATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000194_pilon | genome | sc0000194_pilon:405747..410083 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 889-945:58 |
| Aaloc | 874-888:74 |
| Aaloc | 454-870:927 |
| Aaloc | 211-450:2076 |
| Aaloc | 1-210:4338 |
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