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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000191_pilon:243839..246744- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035756 ID=XLOC_035756|Name=XLOC_035756|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2906bp|location=Sequence derived from alignment at sc0000191_pilon:243839..246744- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCAAGGCCAAAGGAGTAATGGAAGAGGAAGGGACCAAACAAGGGG
TAGAGAGAGAAGTAGGGGAAAGGGCCGAGGTCATGTTGGTAGAGTTTCAA
GCAGGCAGCAAGGTTCAGATGTTGGTAGAGGATCAAACACTAAGGAGAGT
ATGAAGCCAGCTGCTCAAAGAAGAAACAGTAAACCCTCTGTGAAAAGCAG
ACAGAAGGAAAGCCATACCAAAGAAGATCATCAACAGAATCAAAGTTGTG
AGTCTAAACAATCAAACAAGTTTCGGTCAAGAAAACAAAAAGAGTCACAG
CCTGGTAAGGCCTGTAAATTCGTATAATTTAACATAATAAGGACGCCTTT
GTTTTTTTAATGGTCCTGTCATAATAGTTGCATTTCCAAGATATTTTTAT
TTTATACAATAATATAATTTCCTTGATTACATTGTATTGCCTAGAGATTG
AGTAAGTTTGGAAAAAGTGTCATAATTATAAATTAAATCTCAATCTTTCA
ATTTTCTTTTAGAAAAGACTACTGGGTCAATTGCTATGAAAAAAGATTAT
CATAAATCTGGATCAGTTGCTGGCCAGTCTTCAGGAAAAGCAGGTTATTT
ATGTTTAAAATCAAATCCAAAAAAAGAGATTCTGACTTGTCATATATTTC
CTTAAAATGAGAAATTGTTTTTGTAAATGCCTTCAAAATTTTCTTCTTTC
TAGATTGCATTTTGTCTAACAGTTTTGGATGTGAAAACATCAATTGGTCA
AGCAAAGAACTGATCAAATTCTGTGAAAAGAATTTTGTTATGTTTATCAT
GCGTGGAGTTCCTGGTTCAGGAAAAAGTACATTGGCTCAAAAAGTGAAAT
CATTTTATGGTGGAAGAGATGCTATCATTTGCTCAGCCGATGATTATAGG
TAAGACACCGTAAGGTTGTATGGGATCAGGTGACTTCAATGCCTACTTTA
ATCTGCAATTATAGCATTTTTATTTTCCCATTGAGCATTTGAGTTAATTT
AGAATGAAAGTAGAGAATTTATAAAACTCAGTATCAAACTACAAAACTAA
AAATTTGTAAGATGTGGGAAAATATTTTTGAAAATAAAATTGAAATTAAA
TAATTTAGTCTTAGAACACGATTGCCGTTGAAAAAAGAAATGTTTTATAC
CAAAGTCAAGGTTATATCCAGTCTTTTGGAAACGTTTTAGGCGCTGTTCA
CTGTTTCTTGTTGATGTGTCACTGCACAATGTTGAACTTATTTTTATATT
AAGGAGTTGAGAATATAGGTTTCGCACTTTCCTTTTACAGGTACAATAGA
AAAGGCGAATACATATTTAGTGTGGATCAACTTTACAAAACACATTTACA
ATGCCAAAACAAAGCTGAAACCTACTGTAGCAAACAGATTCATGTGATCA
TTATAGGTAAGTTATTAATAGTGGCTGCAAAGTTTGGTACTATATATTGA
CGATGTGACTTGTTGATATACTTGATCTTTTCAGTTACCGATATTTTGAA
AAGCAATAGCAAGTGTAAGTAACTGAAAATTAGTTGTCTTTGCTTTTTCA
CTTGTTACTCTTTATTAATTTATGATTATATACCTTATTGGAACTAATTT
TCGCGGGAACTAATTTTTGCGGTCAAAAAAAAATATCCGGAAAATTGCAT
TTCGCGGGTTTTAATTTTCGTGGTTTTTTCCATTCTGGAATTTTCGCGGG
TTTTAGTTTTCGCGGTTTTGCCCTTTTTTGGACAAATTTCTTTCATTTTC
CTAGGGATTTTTCAAATTTTTCGATAAAATTGGAAAAAATTGTTATTCGC
GGGAATTAATTTTCGCGGTTTTCAGCTCTCAAAATTTTTCGCTAAAATTA
AAACCCGCGAAAATTAGTTCCAATAAGGTATCAAAATGCGTCTCTCATTC
TTCTTTTTCAGATAACACAAACATACATTCAAAGGACTGCAATCCCTATT
TAACCATGGCAAAGAAATACAATTATTTTGTTATTTTCTTAAAAATGAAA
GCTCAAGGTGTTGATCATCATGTTCAGTATAACACACATCAAGTTCCACG
TGACACTATTGCCAAAATGATACTAAGTTATGGATCTAATCCGTTACCCT
ACTATTTCAACTGGGCTGTTCCTAATTCTGAGGGAGTGCGCCTGAGAAAT
GTTACACAAAGACTAATTCAGAGTTGTATGAAAGCAGATAGCCATTTTAG
TAACTTTTTAACAAATGAAATGAAAACTTCATCACAGAATCTTTTCAAGA
CATTTCATTTACAAAATGCCTCAAGTCATCATTACCATGCTACAGTTGCT
TATACCAACCAGTATAATGTACCAACTAAAATCAGTGATAAATATACAAA
GTCTGCTACAGTGAAAAATGCTCTTGGTAGCGTCACCTTCCTTCAAATAG
CTGGTGTATACATCACACCAAAGTGTATAGCCGCTAGGTTGCTATTGACT
GAAGAACAGAAGAAACTATGGGGTAGAAATGATTCTTTAAACCGTGGTGA
AATCAACCCTATCGCTTTTGAATCAAATAAAGTTATGGAGGGCTCTTTAG
AGAAAATGCTTTGTGACTTACATCTTAATAACAAACACATGAATGAGGAT
ACAGTAACTTTTCAAGTACCTCCTGGATGTACAGAACCTAGTCATAGTCT
TGGTTGCACAGCTCACATTACTTTAGGGACGAGGGGTAACAACAAACCTG
TGATTGCAAAAGATACCTTATACCAGATTGTTCATTTAGAAGCATACACT
CTACCAAAAAGTGAAACATTAACCTCAGGGAATCTTGCAATTCGTTGCTA
TGGGGATGATAAATGGGTTATCTATTTTCGACATCCGTTTATAGCGCAAG
CATTGTTTTGTGGACACTATGATTTGATGAAAAATACAGGGTGTCCCAAA
AAGTAG Coding sequence (CDS) from alignment at sc0000191_pilon:243839..246744- >XLOC_035756 ID=XLOC_035756|Name=XLOC_035756|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3384bp|location=Sequence derived from alignment at sc0000191_pilon:243839..246744- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTTTCAAGGCCAAAGGAGTAATGGAAGAGGAAGGGACCAAACAAGGGG
TAGAGAGAGAAGTAGGGGAAAGGGCCGAGGTCATGTTGGTAGAGTTTCAA
GCAGGCAGCAAGGTTCAGATGTTGGTAGAGGATCAAACACTAAGGAGAGT
ATGAAGCCAGCTGCTCAAAGAAGAAACAGTAAACCCTCTGTGAAAAGCAG
ACAGAAGGAAAGCCATACCAAAGAAGATCATCAACAGAATCAAAGTTGTG
AGTCTAAACAATCAAACAAGTTTCGGTCAAGAAAACAAAAAGAGTCACAG
CCTGATGTTTCAAGGCCAAAGGAGTAATGGAAGAGGAAGGGACCAAACAA
GGGGTAGAGAGAGAAGTAGGGGAAAGGGCCGAGGTCATGTTGGTAGAGTT
TCAAGCAGGCAGCAAGGTTCAGATGTTGGTAGAGGATCAAACACTAAGGA
GAGTATGAAGCCAGCTGCTCAAAGAAGAAACAGTAAACCCTCTGTGAAAA
GCAGACAGAAGGAAAGCCATACCAAAGAAGATCATCAACAGAATCAAAGT
TGTGAGTCTAAACAATCAAACAAGTTTCGGTCAAGAAAACAAAAAGAGTC
ACAGCCTGAAAAGACTACTGGGTCAATTGCTATGAAAAAAGATTATCATA
AATCTGGATCAGTTGCTGGCCAGTCTTCAGGAAAAGCAGAAAAGACTACT
GGGTCAATTGCTATGAAAAAAGATTATCATAAATCTGGATCAGTTGCTGG
CCAGTCTTCAGGAAAAGCAGATTGCATTTTGTCTAACAGTTTTGGATGTG
AAAACATCAATTGGTCAAGCAAAGAACTGATCAAATTCTGTGAAAAGAAT
TTTGTTATGTTTATCATGCGTGGAGTTCCTGGTTCAGGAAAAAGTACATT
GGCTCAAAAAGTGAAATCATTTTATGGTGGAAGAGATGCTATCATTTGCT
CAGCCGATGATTATAGATTGCATTTTGTCTAACAGTTTTGGATGTGAAAA
CATCAATTGGTCAAGCAAAGAACTGATCAAATTCTGTGAAAAGAATTTTG
TTATGTTTATCATGCGTGGAGTTCCTGGTTCAGGAAAAAGTACATTGGCT
CAAAAAGTGAAATCATTTTATGGTGGAAGAGATGCTATCATTTGCTCAGC
CGATGATTATAGGTACAATAGAAAAGGCGAATACATATTTAGTGTGGATC
AACTTTACAAAACACATTTACAATGCCAAAACAAAGCTGAAACCTACTGT
AGCAAACAGATTCATGTGATCATTATAGGTACAATAGAAAAGGCGAATAC
ATATTTAGTGTGGATCAACTTTACAAAACACATTTACAATGCCAAAACAA
AGCTGAAACCTACTGTAGCAAACAGATTCATGTGATCATTATAGATAACA
CAAACATACATTCAAAGGACTGCAATCCCTATTTAACCATGGCAAAGAAA
TACAATTATTTTGTTATTTTCTTAAAAATGAAAGCTCAAGGTGTTGATCA
TCATGTTCAGTATAACACACATCAAGTTCCACGTGACACTATTGCCAAAA
TGATACTAAGTTATGGATCTAATCCGTTACCCTACTATTTCAACTGGGCT
GTTCCTAATTCTGAGGGAGTGCGCCTGAGAAATGTTACACAAAGACTAAT
TCAGAGTTGTATGAAAGCAGATAGCCATTTTAGTAACTTTTTAACAAATG
AAATGAAAACTTCATCACAGAATCTTTTCAAGACATTTCATTTACAAAAT
GCCTCAAGTCATCATTACCATGCTACAGTTGCTTATACCAACCAGTATAA
TGTACCAACTAAAATCAGTGATAAATATACAAAGTCTGCTACAGTGAAAA
ATGCTCTTGGTAGCGTCACCTTCCTTCAAATAGCTGGTGTATACATCACA
CCAAAGTGTATAGCCGCTAGGTTGCTATTGACTGAAGAACAGAAGAAACT
ATGGGGTAGAAATGATTCTTTAAACCGTGGTGAAATCAACCCTATCGCTT
TTGAATCAAATAAAGTTATGGAGGGCTCTTTAGAGAAAATGCTTTGTGAC
TTACATCTTAATAACAAACACATGAATGAGGATACAGTAACTTTTCAAGT
ACCTCCTGGATGTACAGAACCTAGTCATAGTCTTGGTTGCACAGCTCACA
TTACTTTAGGGACGAGGGGTAACAACAAACCTGTGATTGCAAAAGATACC
TTATACCAGATTGTTCATTTAGAAGCATACACTCTACCAAAAAGTGAAAC
ATTAACCTCAGGGAATCTTGCAATTCGTTGCTATGGGGATGATAAATGGG
TTATCTATTTTCGACATCCGTTTATAGCGCAAGCATTGTTTTGTGGACAC
TATGATTTGATGAAAAATACAGGGTGTCCCAAAAAGTAGATAACACAAAC
ATACATTCAAAGGACTGCAATCCCTATTTAACCATGGCAAAGAAATACAA
TTATTTTGTTATTTTCTTAAAAATGAAAGCTCAAGGTGTTGATCATCATG
TTCAGTATAACACACATCAAGTTCCACGTGACACTATTGCCAAAATGATA
CTAAGTTATGGATCTAATCCGTTACCCTACTATTTCAACTGGGCTGTTCC
TAATTCTGAGGGAGTGCGCCTGAGAAATGTTACACAAAGACTAATTCAGA
GTTGTATGAAAGCAGATAGCCATTTTAGTAACTTTTTAACAAATGAAATG
AAAACTTCATCACAGAATCTTTTCAAGACATTTCATTTACAAAATGCCTC
AAGTCATCATTACCATGCTACAGTTGCTTATACCAACCAGTATAATGTAC
CAACTAAAATCAGTGATAAATATACAAAGTCTGCTACAGTGAAAAATGCT
CTTGGTAGCGTCACCTTCCTTCAAATAGCTGGTGTATACATCACACCAAA
GTGTATAGCCGCTAGGTTGCTATTGACTGAAGAACAGAAGAAACTATGGG
GTAGAAATGATTCTTTAAACCGTGGTGAAATCAACCCTATCGCTTTTGAA
TCAAATAAAGTTATGGAGGGCTCTTTAGAGAAAATGCTTTGTGACTTACA
TCTTAATAACAAACACATGAATGAGGATACAGTAACTTTTCAAGTACCTC
CTGGATGTACAGAACCTAGTCATAGTCTTGGTTGCACAGCTCACATTACT
TTAGGGACGAGGGGTAACAACAAACCTGTGATTGCAAAAGATACCTTATA
CCAGATTGTTCATTTAGAAGCATACACTCTACCAAAAAGTGAAACATTAA
CCTCAGGGAATCTTGCAATTCGTTGCTATGGGGATGATAAATGGGTTATC
TATTTTCGACATCCGTTTATAGCGCAAGCATTGTTTTGTGGACACTATGA
TTTGATGAAAAATACAGGGTGTCCCAAAAAGTAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000191_pilon | genome | sc0000191_pilon:243839..246744 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 700-1692:994 |
| Aaloc | 583-696:1616 |
| Aaloc | 388-579:2202 |
| Aaloc | 307-384:2393 |
| Aaloc | 1-303:2907 |
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