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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000191_pilon:384186..387961+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035748 ID=XLOC_035748|Name=XLOC_035748|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3776bp|location=Sequence derived from alignment at sc0000191_pilon:384186..387961+ (Clytia hemisphaerica_ch_hm2_pilon)
atgattgGCTTTGGAATGAAAACGAGGTTGGCAATCATCTACTGCGCATG
CGTTCTATTCTCTTTATTTGGTGCATGCTCCAACGTCGAATTAAAAATGT
AAGTCCTGCATGTCTGGTTAAATTTTCATCATATTTTTAatacctgtcaa
aatttgaccGCAGGTTCGTTTGTATATTATATCATTAAGGTTTACATGAT
TTTGCGTAATTAGCGCACTTTTGTTTGTAATTATTTCAGGGATGGTCGTG
GTGTTAAATAATAGAATTGACTGAAAGCTGACCAGGAAAGGGGAGATTAG
GCTCATAAAGCACCTTAAAACATCTgatcgaaatcatcaaaattcaaata
tttttgttttttacagGAACGATATTGAATCAATGAACCCATACGTTCTC
TGTAGTTCCATTCCAAAATACATCAAGAAAGGAACGAATCTCAAATGTTC
AATGGAGAAACAAAAATTGACCAACGTTTACCGTGGTATTCGAGTTGCAG
CCAAAGAATGTCGATATCAATTTCAGATGAGACCGTGGAATTGTTCAGCT
GCTTTCGAATCTGCACCAAGGATCACCTATTATCGTGAGTACAGACAttt
ttttGAGTTCTTAAAATCTTTCTCAAACATCGGCGTAGATACAAGTAAAC
CAAACTAAAACCATTTGGTAGAATGTGACTAGTAGGATTTGAGGTTCCTT
GCACTTCCCGTGGAACCTgaaaaaaatgtcatattttttggttttctgTA
AATCGAAGGCTTTTAGGAAGAATTAATCAAACAATACTAAATCACTCCAT
TGTATCTAAACTTCAAGAAGTGAGACATTTTCGCGCCGGAATGTTGTTTT
TCGTCTAAGCATGAGGACTGAAATCTAATTAACCCGGGGATGTTATCGGA
ATTGCGGCAACAGTAATTCAGTACGaaggaattcaaaaattttataggAA
GGATGTAAGCCCATCTGTACAATTtggtgaaaacaatcgaaaactcTTCG
CCTTAGCGACTATGAAGCAAATAAGCAggaaaacaacacaaaaaggaGAG
AATAGAgaaatagtttgaaaattgagcaaaatttgTTCTATTTCCGCGCA
ACTAATTTCCCATCTCATTTactaatttgaaaatatgtgaAGTTAAGTGG
TAGactaatttcaaattaaaagaaaaattaattaagaGTAATTTATGCGA
TAATTACCCTCATTGATAGAGCGTTTACCAATTGCCAACAGAAATCCACA
ACTTAATATCTGTATACACCAAAAGCTTAACACTCATATTGAATTCTTAA
AACCATACAATTAAAGGGTATCAGCTCAGATATAGTTAACCTGTTTCGAA
GGATTTAATGATCCTATTATTGGATTAAGCACTGAGTCAAAATCTTCTAC
AACTTGTTAAGGAAACTCAACCTTTGATACAACTTCTAAATCGTCTCCAA
TACGGGAAGTCAACAATCGAACTGTGATTCTTCCCAACTAACCAGATTCC
ACCAAACCCAAAACCTTCACCGCTTTTATGCCAGCAAATGATAAGATACA
GATGACCTAAACTAGATGCTTGTTAGACTAGTAACCCTACTGTGGCGTTC
GTAAAACAAGAGGATTAGGGAAATAGGCtatttataattgaaaagaCATA
AACGAATAATAAAGATTATCCTTATTGAGAATTTTGTAaacagaattttt
taaagaatttgaatATGACCAGCTTAAGCTTACACAGCTAGCCAGCTATA
AACATTGCATCGTTTCGCAATAAATTTTTAGTAAACTTGACACTGAGAAT
AAGTcagtttaaaaatcaatttgataAAAACTCTTTATCATATATCTTTA
AGATTAATAATCTTAATTCGACATTTCAAGTCATGTTTTAAAAACTATAG
ATTTGAAATGTATATTACGTCATCAAAACTGGCGTCAAATATATAAGTGC
TCCTCCCTTCAGCAGGAAAACTTTGAGAAGCTCAAAAGTGGGGATCACAG
AATGACCCACCTATAACTTGAAACATCTGTTAACGCTACAAGACgctatt
agaaaaaaaaatcgaagaaaaaaataagcctgagaaaattttaatgtttt
atgcTGAGGTTTGCAAAAAATGGTTTGACACACCTGAAAGGCTATATCCC
TGTATCGTATGTAAAATCGATTCATTAAGTATGTCAGAGAGAGGATCAGC
ATGAAAATCGCCTCCTCCTTCTAAAGACAGCAGAGCGAgaaaaaaaactg
gaaatttcTCCTACGCAGCAAAATTTCACCCAAATTTGTCACAGTCAGGC
TTTTAAAAATTCATAGTATCATTCATGACCATTTAAGTATAAAAATCACA
TGCTATGTTCAACAGGTCACAGAACTGAGATAAGAAAGTAGCATTTTGTT
GATGAACAGGGATTTATTGACCACCTACAGAGCTTTCTTGTACCTACaaa
acagatttaaaaacattttggaCAGATTCCAAAATGATTCAATACTCTAA
GCTTTCACTTTAACTAATGGCTAGATTGTACACATTATAACATGTTATGT
ATATTTATCCTCCAAACTAACAAACATTCAATTTCATATTTACAGCTATC
CCTGAAACTGCATTCTTGTATGCCATCAATTCAGCCGGCATCGCTTACTC
CTTGGCGTGGGCGTGTTACGAAGGCAAAACAAAAGACTGTATGTGTGAAA
AACAAAAATCGGTAAACATCACAACcgaaacattacttaaacatcaAGCC
AATCAGAAATCCCCGGAACAACCGCATATAATGGAGGACCGTAAATGCGC
GAAACACAGTTTACAATATGGAATTGAAGAATCAATGCAATTGTTGGAAA
ACAAACATGAGAACGATATCCGATGGCGAATGGATAACCATAATAAACAA
GCTGGACGATTGGTGAGTTTCTTTTCCCATAATTCAATGCGCTGAATGGG
ATAGGATTCTGGGTAATAAGCAAAGAGTGATACATCTAGTTAAAGGCAAT
ATCAGAGAGTTGAGGATATTTCTTTCCTTAGTTCTTAACGAGATGtcgaa
atattttcataattacTTAGAAATTTGTATAACTGCCATATTTTATCAAA
CAGGGGTaattaaatattttggttttaagtCCAGCCCAGAAAATTAGATT
GTTGTTATACAGTCATTGTGGAAATCTAAACAGTTCTCTATCTATCAAAT
TAACTGATGCTAGACGTTCCAGAAATATTGTTTTGTCTAGAAAGTTCACG
ATAGCAAATCTTGTTGGAAATACCAtatataatgatttttttctcgtgTG
TTTAGGCTCTTATCGATGGACCAATCAACAAGAATCGAGTATGCAGCTGT
CACGGTGTATCTGGAGCTTGTACTATTTCAAAATGTACATTGAAATTACC
GAAATTTGGTGATGTTTCAGATTATCTAATGGAGAAATATAAATCAGCCG
TCCGAATGGGTTCCAATAACCATGGACACTTGATCCCACATCGAGACACT
TTGAACAAAAAACCAACAGAGAATGATTTAGTCTACTTACAAGAGAGTCC
AAGTTTTTGCTCTAAGGACAAAAAATATGGTATTCTGGGCACCAAAGATC
GTGTTTGCGACCCGAAGAGTAAAGGACCTCAAGGTTGTGATGTCTTGTGT
TGCAATCGTGGGTCAGAGAAAATTGTAGAAGTTGAAAAACGAcaatgtaa
atgtaaatttAAGTATTGCTGTGAAGTGAAATGTCAAACATGTGAAAAAC
GAGTAGAATTAGATGTCTGCAAATAG Coding sequence (CDS) from alignment at sc0000191_pilon:384186..387961+ >XLOC_035748 ID=XLOC_035748|Name=XLOC_035748|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2208bp|location=Sequence derived from alignment at sc0000191_pilon:384186..387961+ (Clytia hemisphaerica_ch_hm2_pilon)
atgattgGCTTTGGAATGAAAACGAGGTTGGCAATCATCTACTGCGCATG
CGTTCTATTCTCTTTATTTGGTGCATGCTCCAACGTCGAATTAAAAATat
gattgGCTTTGGAATGAAAACGAGGTTGGCAATCATCTACTGCGCATGCG
TTCTATTCTCTTTATTTGGTGCATGCTCCAACGTCGAATTAAAAATGAAC
GATATTGAATCAATGAACCCATACGTTCTCTGTAGTTCCATTCCAAAATA
CATCAAGAAAGGAACGAATCTCAAATGTTCAATGGAGAAACAAAAATTGA
CCAACGTTTACCGTGGTATTCGAGTTGCAGCCAAAGAATGTCGATATCAA
TTTCAGATGAGACCGTGGAATTGTTCAGCTGCTTTCGAATCTGCACCAAG
GATCACCTATTATCGAACGATATTGAATCAATGAACCCATACGTTCTCTG
TAGTTCCATTCCAAAATACATCAAGAAAGGAACGAATCTCAAATGTTCAA
TGGAGAAACAAAAATTGACCAACGTTTACCGTGGTATTCGAGTTGCAGCC
AAAGAATGTCGATATCAATTTCAGATGAGACCGTGGAATTGTTCAGCTGC
TTTCGAATCTGCACCAAGGATCACCTATTATCCTATCCCTGAAACTGCAT
TCTTGTATGCCATCAATTCAGCCGGCATCGCTTACTCCTTGGCGTGGGCG
TGTTACGAAGGCAAAACAAAAGACTGTATGTGTGAAAAACAAAAATCGGT
AAACATCACAACcgaaacattacttaaacatcaAGCCAATCAGAAATCCC
CGGAACAACCGCATATAATGGAGGACCGTAAATGCGCGAAACACAGTTTA
CAATATGGAATTGAAGAATCAATGCAATTGTTGGAAAACAAACATGAGAA
CGATATCCGATGGCGAATGGATAACCATAATAAACAAGCTGGACGATTGC
TATCCCTGAAACTGCATTCTTGTATGCCATCAATTCAGCCGGCATCGCTT
ACTCCTTGGCGTGGGCGTGTTACGAAGGCAAAACAAAAGACTGTATGTGT
GAAAAACAAAAATCGGTAAACATCACAACcgaaacattacttaaacatca
AGCCAATCAGAAATCCCCGGAACAACCGCATATAATGGAGGACCGTAAAT
GCGCGAAACACAGTTTACAATATGGAATTGAAGAATCAATGCAATTGTTG
GAAAACAAACATGAGAACGATATCCGATGGCGAATGGATAACCATAATAA
ACAAGCTGGACGATTGGCTCTTATCGATGGACCAATCAACAAGAATCGAG
TATGCAGCTGTCACGGTGTATCTGGAGCTTGTACTATTTCAAAATGTACA
TTGAAATTACCGAAATTTGGTGATGTTTCAGATTATCTAATGGAGAAATA
TAAATCAGCCGTCCGAATGGGTTCCAATAACCATGGACACTTGATCCCAC
ATCGAGACACTTTGAACAAAAAACCAACAGAGAATGATTTAGTCTACTTA
CAAGAGAGTCCAAGTTTTTGCTCTAAGGACAAAAAATATGGTATTCTGGG
CACCAAAGATCGTGTTTGCGACCCGAAGAGTAAAGGACCTCAAGGTTGTG
ATGTCTTGTGTTGCAATCGTGGGTCAGAGAAAATTGTAGAAGTTGAAAAA
CGAcaatgtaaatgtaaatttAAGTATTGCTGTGAAGTGAAATGTCAAAC
ATGTGAAAAACGAGTAGAATTAGATGTCTGCAAATAGGCTCTTATCGATG
GACCAATCAACAAGAATCGAGTATGCAGCTGTCACGGTGTATCTGGAGCT
TGTACTATTTCAAAATGTACATTGAAATTACCGAAATTTGGTGATGTTTC
AGATTATCTAATGGAGAAATATAAATCAGCCGTCCGAATGGGTTCCAATA
ACCATGGACACTTGATCCCACATCGAGACACTTTGAACAAAAAACCAACA
GAGAATGATTTAGTCTACTTACAAGAGAGTCCAAGTTTTTGCTCTAAGGA
CAAAAAATATGGTATTCTGGGCACCAAAGATCGTGTTTGCGACCCGAAGA
GTAAAGGACCTCAAGGTTGTGATGTCTTGTGTTGCAATCGTGGGTCAGAG
AAAATTGTAGAAGTTGAAAAACGAcaatgtaaatgtaaatttAAGTATTG
CTGTGAAGTGAAATGTCAAACATGTGAAAAACGAGTAGAATTAGATGTCT
GCAAATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000191_pilon | genome | sc0000191_pilon:384186..387961 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 634-1104:3306 |
| Aaloc | 319-633:2598 |
| Aaloc | 100-315:368 |
| Aaloc | 1-96:1 |
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