XLOC_035744 (mRNA) -

Overview
NameXLOC_035744
Unique NameXLOC_035744
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000191_pilon:339031..340086-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035744 ID=XLOC_035744|Name=XLOC_035744|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1056bp|location=Sequence derived from alignment at sc0000191_pilon:339031..340086- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTCCATCAATCAAACTATTTTAGAGCATTTGTGGGCATTGTTTT ATTTTTTGCTCTGTTCCGCTTATGTGCCCCTCTTGTTTTTCAATACATGA TTCAATATGTGAGACTGATTGTTTCAATGGCTAGCAAGGATGAAGAAAGA GTTAAGAGGGCTGAAGAAATCTCTTGGGAAATGGAATACCAGTTACATGA AATGGACATGAGGTATTACCAACAGAAATGTAAAGAAGATAACCGTGGCA AGGAACCTTATGCTTGGTTGACCGCAATGTTGAATGATAATTATGCAATA GGTGCTATCCAACTTGGTCATATGTTGAAAAAATTATCTTGTTATCATAA ATTGATTGTTTTAGTTTCTGATGGTGTGACTCCAGGAACACGAGAAGCAT TAAGAAAAGTTGGCTTTGAAGTTAAACTTGTTGAAGCACTAGATTGTAAT TGGATGGACCGACAAAAGGGCAGGAAAGAGCGGAATTTAGGATTACCAGG AACTTTCATGAGATTTCATGCGTGGAATTATACCCAATATAAGAAAATTA TGTATCTAGATTCTGATGTCGTTCCTGTAGTCAGTGTTGATGAGTTATTT GATTTGGAGACCGATTTCAATGCTGCTTATTGTGCCAGACCTGGTATTAT TGATCCATGTTTCAATGCAGGGATTATCTTGTTTAAACCGTCCACAAAGC ATTATAATGGGTTGATGAATTTATGGGGTGATTTAACAAAAGGTACAGAA TGTCCTAATGACCAAGTGTTATTATGGCATTATTATGCGGATCATGATAT GTGGAATGAATTACCATACGCTTATAATGTTCGCCGTTATTTGTATCACC CGTTGAAAATTTATCATTTCGCATGCTGCTTAACCAAGAAGCCCTGGCAA GTGAAAAACAAACCCACACGTCAAGATGTCGCTAAATTTAAAGGCCCTTT CAAGGAGCCATGGGATATGGTCATCTTATGGTGGAGATATTTTTACCAAG CTCTAGATGAATATAAATTGAACGAATGGTATAATGATGTCAAAAACAAA ATATAG

Coding sequence (CDS) from alignment at sc0000191_pilon:339031..340086-

>XLOC_035744 ID=XLOC_035744|Name=XLOC_035744|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2112bp|location=Sequence derived from alignment at sc0000191_pilon:339031..340086- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTCCATCAATCAAACTATTTTAGAGCATTTGTGGGCATTGTTTT
ATTTTTTGCTCTGTTCCGCTTATGTGCCCCTCTTGTTTTTCAATACATGA
TTCAATATGTGAGACTGATTGTTTCAATGGCTAGCAAGGATGAAGAAAGA
GTTAAGAGGGCTGAAGAAATCTCTTGGGAAATGGAATACCAGTTACATGA
AATGGACATGAGGTATTACCAACAGAAATGTAAAGAAGATAACCGTGGCA
AGGAACCTTATGCTTGGTTGACCGCAATGTTGAATGATAATTATGCAATA
GGTGCTATCCAACTTGGTCATATGTTGAAAAAATTATCTTGTTATCATAA
ATTGATTGTTTTAGTTTCTGATGGTGTGACTCCAGGAACACGAGAAGCAT
TAAGAAAAGTTGGCTTTGAAGTTAAACTTGTTGAAGCACTAGATTGTAAT
TGGATGGACCGACAAAAGGGCAGGAAAGAGCGGAATTTAGGATTACCAGG
AACTTTCATGAGATTTCATGCGTGGAATTATACCCAATATAAGAAAATTA
TGTATCTAGATTCTGATGTCGTTCCTGTAGTCAGTGTTGATGAGTTATTT
GATTTGGAGACCGATTTCAATGCTGCTTATTGTGCCAGACCTGGTATTAT
TGATCCATGTTTCAATGCAGGGATTATCTTGTTTAAACCGTCCACAAAGC
ATTATAATGGGTTGATGAATTTATGGGGTGATTTAACAAAAGGTACAGAA
TGTCCTAATGACCAAGTGTTATTATGGCATTATTATGCGGATCATGATAT
GTGGAATGAATTACCATACGCTTATAATGTTCGCCGTTATTTGTATCACC
CGTTGAAAATTTATCATTTCGCATGCTGCTTAACCAAGAAGCCCTGGCAA
GTGAAAAACAAACCCACACGTCAAGATGTCGCTAAATTTAAAGGCCCTTT
CAAGGAGCCATGGGATATGGTCATCTTATGGTGGAGATATTTTTACCAAG
CTCTAGATGAATATAAATTGAACGAATGGTATAATGATGTCAAAAACAAA
ATATAGATGGCATTCCATCAATCAAACTATTTTAGAGCATTTGTGGGCAT
TGTTTTATTTTTTGCTCTGTTCCGCTTATGTGCCCCTCTTGTTTTTCAAT
ACATGATTCAATATGTGAGACTGATTGTTTCAATGGCTAGCAAGGATGAA
GAAAGAGTTAAGAGGGCTGAAGAAATCTCTTGGGAAATGGAATACCAGTT
ACATGAAATGGACATGAGGTATTACCAACAGAAATGTAAAGAAGATAACC
GTGGCAAGGAACCTTATGCTTGGTTGACCGCAATGTTGAATGATAATTAT
GCAATAGGTGCTATCCAACTTGGTCATATGTTGAAAAAATTATCTTGTTA
TCATAAATTGATTGTTTTAGTTTCTGATGGTGTGACTCCAGGAACACGAG
AAGCATTAAGAAAAGTTGGCTTTGAAGTTAAACTTGTTGAAGCACTAGAT
TGTAATTGGATGGACCGACAAAAGGGCAGGAAAGAGCGGAATTTAGGATT
ACCAGGAACTTTCATGAGATTTCATGCGTGGAATTATACCCAATATAAGA
AAATTATGTATCTAGATTCTGATGTCGTTCCTGTAGTCAGTGTTGATGAG
TTATTTGATTTGGAGACCGATTTCAATGCTGCTTATTGTGCCAGACCTGG
TATTATTGATCCATGTTTCAATGCAGGGATTATCTTGTTTAAACCGTCCA
CAAAGCATTATAATGGGTTGATGAATTTATGGGGTGATTTAACAAAAGGT
ACAGAATGTCCTAATGACCAAGTGTTATTATGGCATTATTATGCGGATCA
TGATATGTGGAATGAATTACCATACGCTTATAATGTTCGCCGTTATTTGT
ATCACCCGTTGAAAATTTATCATTTCGCATGCTGCTTAACCAAGAAGCCC
TGGCAAGTGAAAAACAAACCCACACGTCAAGATGTCGCTAAATTTAAAGG
CCCTTTCAAGGAGCCATGGGATATGGTCATCTTATGGTGGAGATATTTTT
ACCAAGCTCTAGATGAATATAAATTGAACGAATGGTATAATGATGTCAAA
AACAAAATATAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035744XLOC_035744-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000191_pilongenomesc0000191_pilon:339031..340086 -
Properties
Property NameValue
Aaloc1-1056:1057