|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000270_pilon:43804..49615+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035467 ID=XLOC_035467|Name=XLOC_035467|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5812bp|location=Sequence derived from alignment at sc0000270_pilon:43804..49615+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAATAATAACAGAAGAAATAACAGAGACACAACTAATACATGGTAA
TGGCACTGCTTTGCCTGAGAAAAGGAATGGTTATCATAAAATAGCAAATG
GAAGAAATGGCTTCAATAATAATAGAGAACAGAAACCAGCACAAAGAGAC
AAACCTAAAAAACAACAATTATTTGAAGAGACTCCACTTATTGTTGCTGT
TATAACTTATATTGGATATGGTGTTTTGGTTGTATTCGGTTATTTTAGAG
ATTTTCTTAGGTTGTACAAATTTGAGAAAACCAAAGCTGCAAAAGAAAAG
GGTAGAATGGTAAGGCATTGTATTTCACTTTTAAATAAGATAACATATAC
AgattaaaaatatgtactttgAGATTGCAATACTGGAAACATACAGCTTT
AGATATAGGCAGATATAGGCTGTATTTTCATTCCAGAAAAAGTTTCAGTT
TAGTATCATCCAAAGATTGTTGTTGATTTATGTTATTATTACATAATCAG
ACAGAATCATGTGTCGAAAATTCAATCAACTCGAAATGTTCTTATTATCA
ATATATGACtgacttttttaaattcttagGGGTTTGTTCCATTATATGCA
GACTTTGAATCATTTTATACGCGTAACCTTTATACAAGAATCAGAGACTG
CTGGAACCGTCCAATATGCAGTGTAGCGGGTGCAGAAGTAACACTTCTTG
ACAGAGACAGTGAAGACTATAATTGGAACTTCAggtgtgttttttatttt
ataaatcacTGATTAAAAAGGTAAACTTTCAAAGGTGGTTCCTGTCAGCA
TATTGTACATCTGCAACTTAGTTTCATCCCAAAAAACAAAGTCAGAAATA
AGATGAggcgagattcattgtttctgacattgttgtaaacttggcaatcc
ttcatcaaatgacaagatttttcgatcagtGCTTTCTTCAAAGTGAACTC
TATTTCTTGATACTTTTCTCTAAAATTCTCCAGCAACGTTTTGTCAACGA
ATTGAGTTTGAAATTGTGTGCTTATATAAAGAacctttcattttctggct
taaGATCAGAGAGCATTCCTAATTAGAGCATTACAAAGTGAATTCGTACT
CGAAACTTTTCTCCTTCAGGCATCAGGGAGATGCAAGCAACAACTTGATT
GCTGGTATCATGTACCAAAATTGATAGTTTTTAGGATTCTGGCAGACTTG
ATGAATTAAcaacaagaagcccagagggcatgaaggcccagcgaataaaa
ataAGAACTGAACAAGACTTAAGTAGTAGAGGGTATTTGAACCTGGAGTT
GCTAATACAAGCCATAGAcgccttagaccactcggcTATCTCTTATTGGC
AACAAAgagaaataattcaaaatatttaatcttattccctaacacgtgaa
caactgaactgttcacatgatagagaaatgtaaaaacaacttttttaaaa
gaacatcttcctaaaaagaaaaaggtttgttacggttatttctgtgtaaa
tcacattgtttttcttaaaacgtacTACATCTGCAGACATCTGTTATATT
CTTATAGTTATAATAGTTAAAATAGTTAAtcgtattttctccttttatgt
ttttaaccaataaagacgattgcaattgttttttattctgtcaatcatgt
tctaacagccaatcaaatcttTCACAATATGGACTAGTAAGATGGgttac
acacacacacactaACAGACACGGGCACagtgctaatgaaaggcccgtAC
GCtaagcgctgggccaaaaacaAAGTTTCAAGTTAAGTCCTGACTGCATC
TTTTGGAGAGGTTCATACCATGTGATACCTTGTCTTATTTTGCAAAACTT
GTCAAGGACCTTGTAGGAAGCGTCAGAAGCGTAGGAAGAGTCCACCAAAA
GTTCTTTGATTTAAAGAAAAGCTGAATTTGATTCAACTAGCgactttatt
ctttttttagcaTCACTGGTAAAACCACTCGTGTCATAAACATGGGCTCA
TACAATTACCTTGGCTTTGGAGAGTGCACTGGTCCTTGCACAGATGCAGC
AGAAGATACTATCACTGGTTGTGGAGTTGGAAGTGCAAGCACCAGAAGTG
AAACTggtaaagaaaaaatgtttttcaatattGATGGGATTTTCAAAATC
TGCATATTTATTTGTAAATGAATATTAGTAAATTACAGCAATCTTCTTGC
AAGCTTCTGAGTTTATtgtatgaaaaatctttttgtattATCTTGTGGGT
TTAGATCGATTTAGTTAAAGGTCAAAGgtactttttcaatatttttcata
tcaaaAGGCAAAAGAAATCTTTCCAATTATAAGTACTTACAGTAAGAATT
AGAATTGTCTcccctaatattttttcattgattgAAGAATCATTAACAAC
TATTTTTATGCTACAGGTATGCATGAAAAGCAAGAAGAACTAGAGAACAT
TGTTGCCCGTTTTGTACGTAAAGAAGCTGCAGTCTGTTTCGGAATGGGCT
TTGCCACCAATTCAACTTGTATTCCATCAATTATTGGACCTGGGTGTTGC
ATCATCAGTGATGAACTGAATCACGCCTCTCTTGTACTTGGAACACGACT
GTCGGGAGCTAAAGTCTATGTTTTCAAACACAATGGTATGAAGAAAAGAT
CATGTCTTACTATTTGTTACATGCAAATCTCTAATCTTACTGGGGTTATT
ATAGCTTTGATTGGTACAatctttttcaattgttttttatgtTGTATACT
GgactttttacaaaattgagcaaaaatgGCCTCCAATCAGCCCAAAATAA
AACAGtttaaacataatttttgtATATAGACATGGAAGATCTTGAGAGGA
TTTTGAGAACTTGTATAGTTCAAGGACAACCACGGACACACAGACCATGG
AAAAGAATGATCATTGTTGTGGAAGGTATTTACAGCATGGAAGGATCTAT
CGTCAAATTACCAGAAATTATTGAACTCAAGAAAAAGTACAAGGTAAGTT
ATTAGGAGATTTGACAGTTGATTAcctgctttcattttcaaattttgcat
cattgaaatttttgcatcattaaaattttcaattatgaAAGGATGCCAAG
ACAGATTCTATAGCAAAATTCTATACCAAGTTTTATGGGAATGATATATT
ATATAAAGAGCTAATCAATGCATCATTTCTTGTGTGTTTTCTGGATCCGA
AATATGTCCCTACTGGGTTACTCACTATTTactaaatttctctttttttg
attCAATACAGGCTGTAGAAATTATATTCAATCATAACTTTACCACATTa
aaaaaacttaatatttcttttttttcaggcatATTTATATTTGGATGAGG
CACATAGCATTGGTGCACTTGGACCTAATGGACGTGGTGTTGTCGATTAC
TTTGGATTAGATACAACAGATATTGATATTATGATGGGTACTTTCACCAA
AAGCTTTGGAGCTTCTGGTGGTTACATTGCCGCTGAAAAAGTAAGTCTTA
TTCTTGATTAAAGTCAATgatcttacattttttttgcgaGTACCTCTTAT
TTAATCAAATGTTTTTTAGCTGTCAATCTCAAGACAGAAACATAACACAG
CGTAAAGTTTAAACAGCCACCAAGCAAATTATGTTTTGTCTGTTGATGAT
TCTTGTAAATTATGAATTTTTCACAACCTCTCACTTTTTTAGCATCTCGT
AGACCATATCCGAGCCTCATCATACAGCTCAGCATATGCAGCAACTATGG
CACCAACAGTTATGCAACAAGTTATCTCATCAATGAAAATCATCATGGGT
GAAGATGGAACAAACGAAGGTTTCTAATAATTATTGATTCTCATAACTTG
TATCTAAGTTCAATCAATAAACCAACAATAAAACTCTCAAATTACACATT
CAATTTGTGGAGAAAGCTCAACTCAACTTTTCCATCAAAGTGAAAGTGGC
TATCAAGCTTCTTGCAGTAACTATCCTTTCGACTGTATTAATTGATAGGA
GCGAAAGTTTTTGCTCGCGTTTTTGATTTCCGATGTGTAAAAAATTCCCA
AATAGAGCTCAAAATTCtaaattcatgattttgacaattGTGCTAGAATT
CTGAGGGGAAAGGTTATGAGCATtcaatcatttttcttataattttcagG
AGCAAGACGTTTGAAACAACTCAAAGATAATATTATGTAAGTTCATAAAT
CATTTTGAACTCGAAAAATAAGCAAATGTTCTACAATTTATTTACAACCA
TACAGTTATTTAAACACTTTTCATTGCAGTTGCATTTATATTGTGATTTT
ACTTTTACAGAATGTTCAGACAGAAACTAGAAGACAAAGGATTCATCATC
TATGGCCATGAAGCATCTCCTGTTATCCCATTGTTGTTATACATGCCTGC
TAAAATTGCGTAAGAAAGgcatttgtaaattttgaaaataaaaatgataa
ctATTTAATAAAACTTACCTAAACTTCTCATATTCTAGCTAGGTCAGGCT
AGGTTCAAAAAGTGTCTTTGCGGTCACGAATTTctaccaaatttaaaaat
tttcaactaaAGATTTTGTGCTAAAAATTAAAGAAGTATACCCCCATTGA
GTTTGAAACTCCAAAGAATCTACAGATGGATCTACAatttttctcaagca
agaaaaagtgaagccttaaattTGCCCCGCTTTTAgaaattatgtttgaa
aaacacgCAGGTCACTCACGTgttctagatgggaaataaTTGGCTTTATT
TCCCAGGGAAATAATTGGCTTTATTTCCCAGCCAGGAGTTTCAGATATCG
CCCCTttggggctttgaaatcaaatcaATGGTATGCCCCACTAAAGAGTA
ATCatttaatcaaaataatttcattttaccTTTCCAGTGCATTCAGTCGT
GAAATGTTGAAACGTGGTGTTGGTGTAGTCGTCGTCGGATTTCCAGCAAC
TCCTATTATTGAATCTCGATCTAGATTTTGTTTATCTGCTGCACATACAC
CTGAAATGCTCAACGAGGTACGTGGTATTTATTTGAGGTTTGATGAACAT
CTCATTACATCTTATAAGGAAGCCCCTGAATCACTTATCAACTATTCAat
tcattgttttttcataaGTCCACAATACATTGCATTGGCAAACAATATTC
TACAGCGGACTCTAATTTTCTAAGTAAACAATATTTGCTCTTTTTTGGAT
AAAAGTTTCTttccctatattgttggaatacagttgacgctctctaataa
gggagcttatcgaataagggagcgtcgtttatgagagtttctagtTGACg
gggtttttaaatttcatcgaataagggagcctatcgaatagtagaacgtc
gaattagagagcgtcaactgtattgcCAATCGAGCTGGCAATTTATGGAC
GCCTTGCCAATAATAAATGCCTTTTTAATTTATCCCTTTATaagaattat
tgaaaatgcTAAAAGCTCTATTGTCCCAGGAACATGCGTGTGaacagcgt
gtcttttgggtatttccctcactttttgtccaatgaaacaaaaaaagaaa
ccatgggacactcACTTtatttcttgtgttggtgggatagagcatgttgc
attgcaccaacgcgaaaaaaatttcgtgtccccaagccttaaaacTTGGT
TCTTGCTATTTTTATTCAAAGTGAAACAACTGATAATTTCAAATCATGTT
TCAGGTGTTAGATGCATTAGATGACGTTGGTAACATTCTACAGTTGAAAT
ACTCAAGACTGAGTCCCGAACAACCTATTGAACCACAACAAGAGAAAGCT
AAAGACGAGTAA Coding sequence (CDS) from alignment at sc0000270_pilon:43804..49615+ >XLOC_035467 ID=XLOC_035467|Name=XLOC_035467|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3312bp|location=Sequence derived from alignment at sc0000270_pilon:43804..49615+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCAATAATAACAGAAGAAATAACAGAGACACAACTAATACATGGTAA
TGGCACTGCTTTGCCTGAGAAAAGGAATGGTTATCATAAAATAGCAAATG
GAAGAAATGGCTTCAATAATAATAGAGAACAGAAACCAGCACAAAGAGAC
AAACCTAAAAAACAACAATTATTTGAAGAGACTCCACTTATTGTTGCTGT
TATAACTTATATTGGATATGGTGTTTTGGTTGTATTCGGTTATTTTAGAG
ATTTTCTTAGGTTGTACAAATTTGAGAAAACCAAAGCTGCAAAAGAAAAG
GGTAGAATGATGGCAATAATAACAGAAGAAATAACAGAGACACAACTAAT
ACATGGTAATGGCACTGCTTTGCCTGAGAAAAGGAATGGTTATCATAAAA
TAGCAAATGGAAGAAATGGCTTCAATAATAATAGAGAACAGAAACCAGCA
CAAAGAGACAAACCTAAAAAACAACAATTATTTGAAGAGACTCCACTTAT
TGTTGCTGTTATAACTTATATTGGATATGGTGTTTTGGTTGTATTCGGTT
ATTTTAGAGATTTTCTTAGGTTGTACAAATTTGAGAAAACCAAAGCTGCA
AAAGAAAAGGGTAGAATGGGGTTTGTTCCATTATATGCAGACTTTGAATC
ATTTTATACGCGTAACCTTTATACAAGAATCAGAGACTGCTGGAACCGTC
CAATATGCAGTGTAGCGGGTGCAGAAGTAACACTTCTTGACAGAGACAGT
GAAGACTATAATTGGAACTTCAgGGGTTTGTTCCATTATATGCAGACTTT
GAATCATTTTATACGCGTAACCTTTATACAAGAATCAGAGACTGCTGGAA
CCGTCCAATATGCAGTGTAGCGGGTGCAGAAGTAACACTTCTTGACAGAG
ACAGTGAAGACTATAATTGGAACTTCAgcaTCACTGGTAAAACCACTCGT
GTCATAAACATGGGCTCATACAATTACCTTGGCTTTGGAGAGTGCACTGG
TCCTTGCACAGATGCAGCAGAAGATACTATCACTGGTTGTGGAGTTGGAA
GTGCAAGCACCAGAAGTGAAACTgcaTCACTGGTAAAACCACTCGTGTCA
TAAACATGGGCTCATACAATTACCTTGGCTTTGGAGAGTGCACTGGTCCT
TGCACAGATGCAGCAGAAGATACTATCACTGGTTGTGGAGTTGGAAGTGC
AAGCACCAGAAGTGAAACTgGTATGCATGAAAAGCAAGAAGAACTAGAGA
ACATTGTTGCCCGTTTTGTACGTAAAGAAGCTGCAGTCTGTTTCGGAATG
GGCTTTGCCACCAATTCAACTTGTATTCCATCAATTATTGGACCTGGGTG
TTGCATCATCAGTGATGAACTGAATCACGCCTCTCTTGTACTTGGAACAC
GACTGTCGGGAGCTAAAGTCTATGTTTTCAAACACAATGGTATGCATGAA
AAGCAAGAAGAACTAGAGAACATTGTTGCCCGTTTTGTACGTAAAGAAGC
TGCAGTCTGTTTCGGAATGGGCTTTGCCACCAATTCAACTTGTATTCCAT
CAATTATTGGACCTGGGTGTTGCATCATCAGTGATGAACTGAATCACGCC
TCTCTTGTACTTGGAACACGACTGTCGGGAGCTAAAGTCTATGTTTTCAA
ACACAATGACATGGAAGATCTTGAGAGGATTTTGAGAACTTGTATAGTTC
AAGGACAACCACGGACACACAGACCATGGAAAAGAATGATCATTGTTGTG
GAAGGTATTTACAGCATGGAAGGATCTATCGTCAAATTACCAGAAATTAT
TGAACTCAAGAAAAAGTACAAGACATGGAAGATCTTGAGAGGATTTTGAG
AACTTGTATAGTTCAAGGACAACCACGGACACACAGACCATGGAAAAGAA
TGATCATTGTTGTGGAAGGTATTTACAGCATGGAAGGATCTATCGTCAAA
TTACCAGAAATTATTGAACTCAAGAAAAAGTACAAGgcatATTTATATTT
GGATGAGGCACATAGCATTGGTGCACTTGGACCTAATGGACGTGGTGTTG
TCGATTACTTTGGATTAGATACAACAGATATTGATATTATGATGGGTACT
TTCACCAAAAGCTTTGGAGCTTCTGGTGGTTACATTGCCGCTGAAAAAgc
atATTTATATTTGGATGAGGCACATAGCATTGGTGCACTTGGACCTAATG
GACGTGGTGTTGTCGATTACTTTGGATTAGATACAACAGATATTGATATT
ATGATGGGTACTTTCACCAAAAGCTTTGGAGCTTCTGGTGGTTACATTGC
CGCTGAAAAACATCTCGTAGACCATATCCGAGCCTCATCATACAGCTCAG
CATATGCAGCAACTATGGCACCAACAGTTATGCAACAAGTTATCTCATCA
ATGAAAATCATCATGGGTGAAGATGGAACAAACGAAGCATCTCGTAGACC
ATATCCGAGCCTCATCATACAGCTCAGCATATGCAGCAACTATGGCACCA
ACAGTTATGCAACAAGTTATCTCATCAATGAAAATCATCATGGGTGAAGA
TGGAACAAACGAAGGAGCAAGACGTTTGAAACAACTCAAAGATAATATTA
TGAGCAAGACGTTTGAAACAACTCAAAGATAATATTATAATGTTCAGACA
GAAACTAGAAGACAAAGGATTCATCATCTATGGCCATGAAGCATCTCCTG
TTATCCCATTGTTGTTATACATGCCTGCTAAAATTGCAATGTTCAGACAG
AAACTAGAAGACAAAGGATTCATCATCTATGGCCATGAAGCATCTCCTGT
TATCCCATTGTTGTTATACATGCCTGCTAAAATTGCTGCATTCAGTCGTG
AAATGTTGAAACGTGGTGTTGGTGTAGTCGTCGTCGGATTTCCAGCAACT
CCTATTATTGAATCTCGATCTAGATTTTGTTTATCTGCTGCACATACACC
TGAAATGCTCAACGAGTGCATTCAGTCGTGAAATGTTGAAACGTGGTGTT
GGTGTAGTCGTCGTCGGATTTCCAGCAACTCCTATTATTGAATCTCGATC
TAGATTTTGTTTATCTGCTGCACATACACCTGAAATGCTCAACGAGGTGT
TAGATGCATTAGATGACGTTGGTAACATTCTACAGTTGAAATACTCAAGA
CTGAGTCCCGAACAACCTATTGAACCACAACAAGAGAAAGCTAAAGACGA
GTAAGTGTTAGATGCATTAGATGACGTTGGTAACATTCTACAGTTGAAAT
ACTCAAGACTGAGTCCCGAACAACCTATTGAACCACAACAAGAGAAAGCT
AAAGACGAGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000270_pilon | genome | sc0000270_pilon:43804..49615 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1549-1656:5705 |
| Aaloc | 1420-1548:4889 |
| Aaloc | 1321-1416:4312 |
| Aaloc | 1285-1317:4152 |
| Aaloc | 1156-1281:3693 |
| Aaloc | 994-1155:3329 |
| Aaloc | 832-993:2832 |
| Aaloc | 613-828:2419 |
| Aaloc | 466-609:1962 |
| Aaloc | 310-462:580 |
| Aaloc | 1-309:1 |
|
