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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000503_pilon:115000..124526+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035431 ID=XLOC_035431|Name=XLOC_035431|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9527bp|location=Sequence derived from alignment at sc0000503_pilon:115000..124526+ (Clytia hemisphaerica_ch_hm2_pilon) ATGTTGCTAACTCAgaggaaatcttttctgaagaGACTTTACCGGTTGCC
GATTGATTGGCTTGAAGAGAGCACAACTggtatggaattttttttgtttc
ccgttcgtaatacacgttttctttataagaacaaacatttttaaactttc
ggatgttcttataagtaTTTTCACCAATTTGCAAGTATCCTTTctcctaa
gaaatcaggtggtTTAGAGGCcgtaaagctttaaaatgtttttaagttGC
TCTTATATTTTAGTCATGctagccttatgttcttatacagtttgctctta
taagaaagatgaaaattccaagcacttttttgtGGACGTTATACGcccaa
aatactcaattttgaattgagtcTCAAAACTCAAtagtgaaaaatttcgt
gtcaaatatttcaaaaagataaagatagTGAGCAAAATCAGAATgtcatt
caattcaattcaattcaattcgaTACTTTCCtttttttCGCAAATAGCat
gcttactctcgggtacctaatagccggggggtttggaataagcagggggg
ctggaaaaaatctcgaaaatcaataagcgggggggttggaataaaaatgt
cctgggtggaaaattttcgaaaaagaggctaatacagcagaattagggca
aaagagagaactttcaaaaaaaatttcccgaaaatcaataaacggggggg
ttggaataagaatgtcctgggtggaaaattttcgaaaaattagtTAGCGG
ccccccccctcccggctattaggtacccgagagtaatacCTGAAAATAAA
CCCTTCATAAGTGGCCTAGAGGGGGGTTTGAAAAGATTTTAGCGCCTACA
GCGCGTATCAACCACCCACAATGGTTACTCTGAAGgccaaaactcaattt
ctaagtCAAAAAACGGCAAGTGaccaaagtgcttggaattttgctTGCTG
AGTTGACTCTTTCTAATTCGAGCTACAAGGGATCAATTGTCTTCGAATTG
GAGAATTACGGGTAGTATTTTAcaccactttccagctgagagGACCAacg
ttttagttcgaattacagtcagctctctctctaattcgaacatttctgta
attcgaatctttctataattcgaaataaGATATTGGCcctttcagctaga
aattagtataaaatactttttgtaatttgaatgtttcactaattcgaaga
aaatctttAGTCCCTTGATGAAAATTAGCTTTTCTGTTCATTAGACGGAA
GGTCGTTCCAGAGAAATCGGCAGTCCGCCGTACATtttgtcctgatatga
aatatgtgtctgatatgaaacttatgcaaaaataaaacctttaaaagtat
aatattctttcaatttttcaggactTGCTGATTCAATTTTGGTTAATAGC
AAATTCACGGCTCAAATATTTCGTGATACCTTTACTTCGCTTTCACATAT
CGAACCTGTTGTTTTGTACCCAAGCCTCAATTTCGACGCCTTCAAGAAAG
AAATTCCTTCCCATGTTCGCGAACGTATATTAAAAGATCAAATACCTAGT
GGCAGATCTCATTTCTTCTTATCCATCAATCGCTACGAACGAAAGAAGAA
TTTAGGACTTGCACTCAATGCATTTAAAGCAGTGAAGGACAAGTGCACTA
CAAGTCAGTGGGGCAGTGTTCATCTTATTATGGCAGGTACAAGTCATTCA
TATTAATTATACCCTACAGCTGGAATTTTCGGCTATCTTCTTTAGTTTGC
TGTTGCAAAAGTCAAATATGACTGCTCCTTTATTTCGAACcttatttttc
aagaaattttatcaAGAAATCCTGttcagttgacgctctctaattcgacg
ttctattatttgatacgctccattattcgataattttGAAATCCACTGCC
AACATGAAAGTCATAATTGACGCTCTACttttcgataagctcccttattc
gatgaaaatctgaCTCTCTTTGagaatcgaattagagagcggcAACTGTT
TATAACTGTATAATTGTACATGTTTTATACTCTATAATAGAATATTTTGT
TTCTCCGTAATTCTTAGCTTACAGTTTCATTCATAAGTTTGAGAACCGAt
cctaaaggccggtctccacttgggCGCGTCGCGATCACACTTtctcgagc
aaagcttccacgctattggtcaaaagaaaaatgaagcaattccattggcg
cgatctgacgtagcgcgcgctacatttttatgacctAATCtctttttcca
agcaaaaagtattgaagccaaaaggtgcggttgcagcgcgcgcaagtgga
gaccgaccCTAATACTTATGTATTCTTATTGTTCTTTAACCTTTGTTCCT
TTTAGGAGGCTACGATGAACGTGTTATCGAAAACAAGGAATATTACTTAG
AGCTCCAATCGTTAGCTTTGAATCTCGGCATTAAAGAGCACATCACTTTC
CTACGCTCTTTCTCTGATGATGAGAAACTAGCTCTGTTGGAGTTAGCCAC
TTGTCTATTATACACCCCTTCGAATGAACACTTTGGTATTGTTCCTATTG
AATCAATGTTCATGATGTGTCCAGTGATTGCATGCAATAGTGGCGGCCCA
TTGGAAACGGTTAAAGACGAGGTAAGGATCATTGAGTTTAAGGCCCGAGC
GGCTAGAGTAGAGTTTCTAACTTTTcctaggcaagaaaaagtgaagccat
ctatttcccattcaaaacgcgcctagaacgcgccgtagTCATGATGACGG
ATTGtttctagcggttcctttgtttttgaggactgcatctagcgatagat
tttagtttcaatccgcgggcgttctggatgggaaataagttgtttcattt
cccattcaggagtctcgagtctttAAATAGTCTCGAGAATAAATTTCCTG
ATATCTTTGGGTACTTGTTTTTTAATAAGTCGGTGtttttttAGAATGTA
CCAAATTGTCTTTGTCTTTTCCGTTTGAGTATCTCCTGTTTAAGGCAACC
ATTCTTAATGAAAACCTTTACATgagtatttcaatttattttgagaaaaa
gagaaaatatgaaatattacGAtttttttAGTCCGGCTTTAATTGGATGA
GTTGAACAGCTACAATTTAAGGACAAAATTAGGAGTAATCTAGGATGAAA
GCTTTCTTATGTGCGGATGGATGAAAAATTCCACAGTCAATTACTCCTCA
TCTATGAAAGATTCCGTCTTGAAATTATACTCTCAAATAGTGTACCATAT
AAGTTATTAGAAAATGTAAGCAAAATGATGAAAGGAGTAGAAAAGGATGG
gatattccaaaaatattgataaaaaacggATTGTCGAAAAGAATGCTTTA
TAAACTAATGGATATTATTTTGAGGATGAAAATTACACGAGTGTAATAGT
AAAGAGTGTATCTTTCAGAAAATAGCAATATATTTACCGAAAGAGTGACA
TAGGatgaaatattccactttttatGTCACCCGAAATCGAATATTGTGGA
ATTCTTCATCCTTTTCTACtccttaaatttaaatttgaaaatttatggtA
TCAACAAAATAGATTTCCgaagataattttaaaaaattgctatagtaaaa
atcagaaaatcttgattttctggAATATTTCATCCCAAATTACCCCGAAA
TCTATATCATTGGAATCCTCATGGAAAAATAAGTCCTTTCTGAAATAAGG
TCCCAAAATTCCTAACGTCAAAAAAGATATCGCGAAAAAGATGATTTTAA
AGATCTCTCAAAAGTCCATCAGgtacattctaaaaaaaacacCGACAAAA
GCATATTATTTATGGAAAACAGACTCGCTTATGCATAAGCTattatattt
tggaatcaaGCTCAAATTATGCTTTTGATATGCTTAATTTTCCGACAAAA
ATTGGTTcattaaaaatagaaaagaaaaattaacctTTCCAACCAAGTAC
AAAACCCGGAACATTGACCAATGACCAAAGCTCACTGACATGCTAAAGGT
ATGCTTATTTTTCACGAAATCCAGGGATTAATAAGCTTATGAGAATGAAA
CATGTATTTCAAGATTATGGTAtagcgtacacgttttttataagatcaaa
cTGTAtaggaacataaggcttcaagagccaaaatattaaaaatatgctaa
gaactttttaaggcttttttgactctaaaacttttagatttttaggaaat
cacacaaaaatactcacaaaacggTGAAAAAGTACGTAAAGAATAAAGGC
ATAAATAGGTtttgttgttcttataaaaaacgtatagtGTTTTTGTATTT
aagtagtaagtctgcgaccgcagtcggaggcgacccgaaggctcctcttt
cgatagctttcTACTCGagggtaggggagggcgccactctttctccttgg
attgctccacttacccttgatccgtctctttaattgctgagcatcaagca
gagaagcatcaagtaccattttgagaatctttggtatgacccgactgAGG
GTTGAActcacaaccttgcgaaccgtagccggatgatctaccactgcact
acggttcTGTATTTGATTCATCTACTGGACACAATTTACACAATCTTTTC
ATCTCAGGTAACTGGATATCTATCTCCTCCAAAAGCTGATGAGTTTGCTT
CAAGAATGATGAAATTTGTGAACGACGAAACGCTAAAGAAATCGTTAGGA
GCGAACGGACGCGAAAGAGTGCTTCAGCATTTCTCGTTTGAAGCTTTCAC
AGGAAACTTAGATGAAACAGTatgttggttgttttttttttgcttccttt
ttggacctaccccggtggggtggaggtcctataaattaacccatgttcgt
tagttagttagtgtgttaccagcttttctcgagattggctcattagtttt
ttctgatttttagcacaaaggtgcatgaccataaaccctcgaatgtgacg
gagcccgattttcgaaaaaagaattggggggggggtAaatttgggccaaa
aaacggcttaaaatcgggttttttggactttgtgaaaaattggatcatta
aatttttctgatttttagcatgaaagtagggtacaatcataggtaaaaga
tggctcaagcagattttttgaaaaaaaaatttttgactcaaaaatcgcat
ttttatctataagaaccgcttttaataagaatacatcaatgttctaagcc
atattattattattatttttattagttttttttaagatgaaaatgtcacg
gtagagggTAATGATTTGAgTtttctgtaaacacttattatttttttggc
tgaaaaacgaatCtttatctatAagaatcactatttatgaacatagatca
atgttattagccaaaTtttttttttattattatcttttctaacagaagaa
aatgtcacggtagagtgcgacggtttgagttttctggaaaccttatttat
taagctgtgcatttttctgatagtggtttttataaagaaaagcgcttaat
agcttttttatttcttttacgtgaaaaaagctgaaaaaggagaaaaattc
gtgttaatttcagatcatgcaaatttcaaggccgttgattacttgcctag
taatattcgtgtaataaggtactttaggcgtacaaactttcgcgagcaaa
aactttcgcgattttcgtgaattttggcccttttcgcgaaagtaaatgtc
tttaaaaattctaggaaggaccatttgcgaaagtttatgctcgcgaaaaa
ctcttgacaaaatagaaaatctgtaaaacttcaaactttgaataaagtgt
aacttttatggcactttttagcctgctaaacgACGAATAAGTCAAgagac
aaatgtttcaagccaatccaagaagtattctcaattttacgtcttgattc
gcgaaagggtatactcgcgaaaaatattttttctgttaaagtcgcgaaag
taaatgtcgtgaatttcgcaatttttttttgtacgCCTGTAGTAGTCTGA
GACCAGGTTCACAAGTAACGGTTCCGTTTGGCtgcgaaacgaaatgaagc
cattctattggttagaagttaCTTTATTAGCGAGTTACTTCattagtgag
tttatgtatttgcgcttTCGAGGACGGcgaagtgactgaagcgatttgga
ataactcGCGCAGTTTTAACCcgaaaaatcgaggacggtaattTACCTTC
Atcctcagttgatcaggatctagacaaattagaagcttaccgtctccgtc
acagATCCATAAACTCGCTTTTTCTTTTCGGatcgaaacggaaccgtagc
gtgtgaacatggtctgaaTTACATACCTCTACAAAACCTCAGgtatttga
gggggggggggtgaaatcGCTAGTGTATGTCAGCAgcctaatacaccttt
tcgaccgcagtcgagcggtgtcacttaattatttaacTATCCGCTAAACT
CGATTCaatccttttttggacctaccccggtggggtggaggtcctataaa
ttaacccgtgttcgttagttagttagttcgttcgttagttacaaactttt
ctcgagattggctcattcaatttttctgattttttgcacaaaggtgcatt
actataaaccctcgaatgtgacggagcccgattttcgaaaaaaaaatttt
tccggccggtagaaccggaaatgtcccgaaaaaagcggttttttgagatt
ttctcgagattttatcattagttttttgcgattttttgcacatagatgca
cattagtactgccgaaaaggtgtcgaaaccgtttgccgaaaaaaaatttt
ttccgtctgtagaaccggaaatgtgccggaatcgtcgttttttcacattt
ccgtcacatttttttcaacttatttaatgtttctctttacagaaaaatgt
tctttatgatgatgcccaaaacttagcatcgtttgatttccaaaaatcaT
CCTTtaaatccggaactccttaaaaatcgccggaacagccgaaaaccggc
gtaaaaaacggttttccttcattttttcaacttatactacctcgacagat
tttcatgatttttttgcacaatgatgtaaaatggcaatgcccaaaatgtg
acagagccaattttcgaaaagaaatttttcggCCGCTAGatccggaaatg
tcccgaaaaaaagcggtttttttgagattttctcattagtttttttgcga
ttttttgcacatagatgcacattagtactgccgaaaaggtgtcgaaaacc
gtttgtcgaaaaagtttttttccgtctgtagaaccggaaatgtgccggaa
atcgtcgttttttttcacatttccgtcacatttttcaacttatttaattg
tttctttacagaaaatgttctttatgatgatgcccaaaacttagcaatgt
ttgatttccaaaaaatcatcctttgaatcctcCGAActcttaaaaatcgc
cggaataggcgaaaaccggcgtaaaacggttttccttcattttttcaact
tatactcgacaaattttcatgatttttcgcacaatgatgtaaaatggcaa
tgcccaaaatgtgacggagccgagTCTGATTCCTTTAAAACGGAATTTTC
CGGGCGGAAATATAATCAATCTgtgaaataatgaaaactgaaaactaaat
gttttttttacttcagttttaattttctctgaatgattgattaaagtgtc
gatattatttttctttcaccgttaaacatcgatgcgtttcttaattgctt
tctccgttccaatagatatataaatcgaaatttaaaattatacattactt
ccattaaattctaattattcgttttataaataggtaggtccattaaagta
ttacttgttgaTACATTTTTCTactgtctataggtgcgaaaaaaggactg
ggacggtttagTTGGATAAAAGCGGGCAAGAAAATGCccgcgtggcaatt
ggcggctacggtcgaaaaggtgtattctaaCCTTTTTACAACCCATTCAT
CACGCTCTGTATTTGAAAAGAATAATACCTAGTTATTTCGGACACTCTCC
atgtcaaaacgaggctaaaacttatctagcacccagatggtgaaattttc
atccgacatgcTAAAGCTCTGatggtcgggaaaattttcaacatctggaa
ggtttacattacggaattttgcgagactgcgtcaagaattttgcagcggg
aggtctggtaacccagccctcgttttcagggaattggcgggtccaaccga
aatatttctaGCTTTACGggcaagggctgttgaacccgactgggggcggc
acatcaaaggccgactatcattcctctccgatggaaAATTGGCCCGTCGG
AATATTAAGACTAAAACCTTTGTTTACGCAGCCACGAGACTTCAAGAATA
GTCGGATTTGGCAAAGATTTGTTGCTCTTGTTCCTTTGTTTGGGTGAATA
CCTTGGGGTCTTCCTTTTAATCTTACAACAATCTAATCTAATAAACTTAT
AACgggattttccagaaaaaaaaatttgaatatgggtgttgaggatataa
cattttttggaaatttacccacGGACATGTGACTTTTGACCTGCCGGACA
Acaggttttaccccccggacaagcatcagttgaccccactggacattcaa
aattactctCAAACAGGGcgaaattacccccaaacagagaaAATTTACCC
CCATGCAAGGTAAATTttcactccccccccccccctgacacTATATCATC
CACCcgccatgtacggacattttctggaagagcccaatcctagctttttt
aagaaaaatggaTCCAAATAATGTTACGGCCAATGGCGGTCAATTGACTT
TGATATGATTTGATGtgaacaaataaaaaatccaaaataaaatcagccca
attcatgatattcatgatgtaatatTTTATACAGAAGCACCCGAAATAGc
ccgggcgtttgccactagttttattTGCAACTTTATCGTACTTTACCCAT
AACGCTTTTTCTGAGCACTGATTGGTTCATTCAGGCCAATTACATCataa
ttttgagtttcaaccaatcagatcgaTTTGATTGTTAAGGGTAAGTAGGG
TAGTTGCAAACACCCACACCTTGTTTTTGctgtttccgtataaaacatta
cgtcatgaattcatgatttacatgttttttttatatgagAaCATCCAATA
CTTTTCAAGTCTTTGAATGTTCTTTACTTTTTGAGTTTAAGCCTAAACag
gttcttaacatgttcttattttcaccattctgtgattattttagtccatt
ttcttaagaagtTGAGTGTTTtaagagtccacaaagccttaaaatgttct
tatatagtttgttcttataaaaaaagcatgtaattttcatatacttttca
GGCCCGCGAACTGGTCAACGAAGAATCAGCTTATGAAACAGGAGTTTCTG
ACattattttacgttatggtactttactttatatatttttactatttcta
ggtattttctattatattatcattttt Coding sequence (CDS) from alignment at sc0000503_pilon:115000..124526+ >XLOC_035431 ID=XLOC_035431|Name=XLOC_035431|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1896bp|location=Sequence derived from alignment at sc0000503_pilon:115000..124526+ (Clytia hemisphaerica_ch_hm2_pilon) ATGTTGCTAACTCAgaggaaatcttttctgaagaGACTTTACCGGTTGCC GATTGATTGGCTTGAAGAGAGCACAACTgATGTTGCTAACTCAgaggaaa tcttttctgaagaGACTTTACCGGTTGCCGATTGATTGGCTTGAAGAGAG CACAACTggactTGCTGATTCAATTTTGGTTAATAGCAAATTCACGGCTC AAATATTTCGTGATACCTTTACTTCGCTTTCACATATCGAACCTGTTGTT TTGTACCCAAGCCTCAATTTCGACGCCTTCAAGAAAGAAATTCCTTCCCA TGTTCGCGAACGTATATTAAAAGATCAAATACCTAGTGGCAGATCTCATT TCTTCTTATCCATCAATCGCTACGAACGAAAGAAGAATTTAGGACTTGCA CTCAATGCATTTAAAGCAGTGAAGGACAAGTGCACTACAAGTCAGTGGGG CAGTGTTCATCTTATTATGGCAGgactTGCTGATTCAATTTTGGTTAATA GCAAATTCACGGCTCAAATATTTCGTGATACCTTTACTTCGCTTTCACAT ATCGAACCTGTTGTTTTGTACCCAAGCCTCAATTTCGACGCCTTCAAGAA AGAAATTCCTTCCCATGTTCGCGAACGTATATTAAAAGATCAAATACCTA GTGGCAGATCTCATTTCTTCTTATCCATCAATCGCTACGAACGAAAGAAG AATTTAGGACTTGCACTCAATGCATTTAAAGCAGTGAAGGACAAGTGCAC TACAAGTCAGTGGGGCAGTGTTCATCTTATTATGGCAGGAGGCTACGATG AACGTGTTATCGAAAACAAGGAATATTACTTAGAGCTCCAATCGTTAGCT TTGAATCTCGGCATTAAAGAGCACATCACTTTCCTACGCTCTTTCTCTGA TGATGAGAAACTAGCTCTGTTGGAGTTAGCCACTTGTCTATTATACACCC CTTCGAATGAACACTTTGGTATTGTTCCTATTGAATCAATGTTCATGATG TGTCCAGTGATTGCATGCAATAGTGGCGGCCCATTGGAAACGGTTAAAGA CGAGGAGGCTACGATGAACGTGTTATCGAAAACAAGGAATATTACTTAGA GCTCCAATCGTTAGCTTTGAATCTCGGCATTAAAGAGCACATCACTTTCC TACGCTCTTTCTCTGATGATGAGAAACTAGCTCTGTTGGAGTTAGCCACT TGTCTATTATACACCCCTTCGAATGAACACTTTGGTATTGTTCCTATTGA ATCAATGTTCATGATGTGTCCAGTGATTGCATGCAATAGTGGCGGCCCAT TGGAAACGGTTAAAGACGAGGTAACTGGATATCTATCTCCTCCAAAAGCT GATGAGTTTGCTTCAAGAATGATGAAATTTGTGAACGACGAAACGCTAAA GAAATCGTTAGGAGCGAACGGACGCGAAAGAGTGCTTCAGCATTTCTCGT TTGAAGCTTTCACAGGAAACTTAGATGAAACAGTAACTGGATATCTATCT CCTCCAAAAGCTGATGAGTTTGCTTCAAGAATGATGAAATTTGTGAACGA CGAAACGCTAAAGAAATCGTTAGGAGCGAACGGACGCGAAAGAGTGCTTC AGCATTTCTCGTTTGAAGCTTTCACAGGAAACTTAGATGAAACAGCCCGC GAACTGGTCAACGAAGAATCAGCTTATGAAACAGGAGTTTCTGACattat tttacgttatggtactttactttatatatttttactatttctaggtattt tctattatattatcatttttGCCCGCGAACTGGTCAACGAAGAATCAGCT TATGAAACAGGAGTTTCTGACattattttacgttatggtactttacttta tatatttttactatttctaggtattttctattatattatcattttt
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| sc0000503_pilon | genome | sc0000503_pilon:115000..124526 + |
Properties
| Property Name | Value |
| Aaloc | 823-948:9402 |
| Aaloc | 661-822:4608 |
| Aaloc | 397-660:2358 |
| Aaloc | 82-393:1374 |
| Aaloc | 1-78:1 |
|