XLOC_035427 (mRNA) -

Overview
NameXLOC_035427
Unique NameXLOC_035427
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000097_pilon:1172784..1173464-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_035427 ID=XLOC_035427|Name=XLOC_035427|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=681bp|location=Sequence derived from alignment at sc0000097_pilon:1172784..1173464- (Clytia hemisphaerica_ch_hm2_pilon)
CAGGAAAATTTTAATAGAGGCGCCAAAACTAGACATTCGTCTTCAGTACT AATGTCGTTCGACGAAGAGCCTGCATCCGACGAGATGCTTCGTCGAATTA CGCTGCAGCTAGCAGACAATAGTTCTCGTCAGGACAAGACCTTGCAAGAA CTAATGAAAACTATCGCGGGTCAAAAGACCAAAACGGCCATGCGACAACC GAAGTTTAAGGGCACCGAGGAACCCTTTGTCACAGATTTTTTCAATTATT TTGATCAATACGCAAAATACTATAGTCTTACTGATGACGATAAACTTCTA GTGTTTCCTTCTTGCCTCGAGGAAAACGCTTTATTTTTCTTCGGAACTCT TCAACCCGGAGAAATCGATACTTTTAAAAAGATAAAAGATATTTTCAAAG AAAAATATTATCCAAAAAAACTGGAAATGCTAAAAATAGCCCAATTACAC GGCAGGAAAATGACAAAGACGGAGTCCCTGGAAACATACTCCCTTTCCAT CCAAAACGAGGCCCGCAAGCTTGAGTTGTCGGATAAGGAAGCCAAAAATA TTTTTGTCCAGGGTCTTCAACCCGACCTAAAAGAATACGTCATGCTACAC TATCCAGATACGTACGCGGAGGCACGTGCTTTAGCCGAAAATAAATACGC TGTTTTACAAACATTAAAAGGATCTAAGGAG

Coding sequence (CDS) from alignment at sc0000097_pilon:1172784..1173464-

>XLOC_035427 ID=XLOC_035427|Name=XLOC_035427|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1362bp|location=Sequence derived from alignment at sc0000097_pilon:1172784..1173464- (Clytia hemisphaerica_ch_hm2_pilon)
CAGGAAAATTTTAATAGAGGCGCCAAAACTAGACATTCGTCTTCAGTACT
AATGTCGTTCGACGAAGAGCCTGCATCCGACGAGATGCTTCGTCGAATTA
CGCTGCAGCTAGCAGACAATAGTTCTCGTCAGGACAAGACCTTGCAAGAA
CTAATGAAAACTATCGCGGGTCAAAAGACCAAAACGGCCATGCGACAACC
GAAGTTTAAGGGCACCGAGGAACCCTTTGTCACAGATTTTTTCAATTATT
TTGATCAATACGCAAAATACTATAGTCTTACTGATGACGATAAACTTCTA
GTGTTTCCTTCTTGCCTCGAGGAAAACGCTTTATTTTTCTTCGGAACTCT
TCAACCCGGAGAAATCGATACTTTTAAAAAGATAAAAGATATTTTCAAAG
AAAAATATTATCCAAAAAAACTGGAAATGCTAAAAATAGCCCAATTACAC
GGCAGGAAAATGACAAAGACGGAGTCCCTGGAAACATACTCCCTTTCCAT
CCAAAACGAGGCCCGCAAGCTTGAGTTGTCGGATAAGGAAGCCAAAAATA
TTTTTGTCCAGGGTCTTCAACCCGACCTAAAAGAATACGTCATGCTACAC
TATCCAGATACGTACGCGGAGGCACGTGCTTTAGCCGAAAATAAATACGC
TGTTTTACAAACATTAAAAGGATCTAAGGAGCAGGAAAATTTTAATAGAG
GCGCCAAAACTAGACATTCGTCTTCAGTACTAATGTCGTTCGACGAAGAG
CCTGCATCCGACGAGATGCTTCGTCGAATTACGCTGCAGCTAGCAGACAA
TAGTTCTCGTCAGGACAAGACCTTGCAAGAACTAATGAAAACTATCGCGG
GTCAAAAGACCAAAACGGCCATGCGACAACCGAAGTTTAAGGGCACCGAG
GAACCCTTTGTCACAGATTTTTTCAATTATTTTGATCAATACGCAAAATA
CTATAGTCTTACTGATGACGATAAACTTCTAGTGTTTCCTTCTTGCCTCG
AGGAAAACGCTTTATTTTTCTTCGGAACTCTTCAACCCGGAGAAATCGAT
ACTTTTAAAAAGATAAAAGATATTTTCAAAGAAAAATATTATCCAAAAAA
ACTGGAAATGCTAAAAATAGCCCAATTACACGGCAGGAAAATGACAAAGA
CGGAGTCCCTGGAAACATACTCCCTTTCCATCCAAAACGAGGCCCGCAAG
CTTGAGTTGTCGGATAAGGAAGCCAAAAATATTTTTGTCCAGGGTCTTCA
ACCCGACCTAAAAGAATACGTCATGCTACACTATCCAGATACGTACGCGG
AGGCACGTGCTTTAGCCGAAAATAAATACGCTGTTTTACAAACATTAAAA
GGATCTAAGGAG
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
XLOC_035427XLOC_035427-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000097_pilongenomesc0000097_pilon:1172784..1173464 -
Properties
Property NameValue
Aaloc1-681:682