|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000003_pilon:629846..632569- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_035393 ID=XLOC_035393|Name=XLOC_035393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2724bp|location=Sequence derived from alignment at sc0000003_pilon:629846..632569- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCATTGTGAAATTTTTGTTTTGTATTTCTTTGTATTTTTGAATCT
AACAAATGCCCTTCAAATGAACAGTTGCAGCAAAGATGATTTCTACCTAC
GCAAAAATGTTGGGCGAAATGTCATCTTTCCTGGAGAGATTATTGATGTT
GAAAATGTGAGAACATATCAACAATGCTTCGGATATTGTCAAAGATATGC
ATGTTCTTTATTCAATTTTGAAGAAGTTGCCGCTGGAAATTTTAAATGCG
GTGTTTATCCAGGACCAGAATTCATATCACGGTATTCGCCGAAAACTCGC
TTTGGAATAGAACCGGTTCATCGATTTTTCTTCGAGAAAGTACCATGCCA
GACAGATGAAAGTTCTGAATATTCATTCAAAGGGACTTTTCTTGAAGCAG
AAAATTGTAAAGAAGTTCAAGAAAATGGCGGTGGTGAAACAGGTAAAATA
ATAAGCTACTTTATGGAATAAGATTTCGTGGATTTGGGTATCATACGCCA
AATCTGAAGGCTCTAAACTAATTAGAAAAAAAATGCCAAAGACTGTCCAA
GGTCCAAGGGTCACTTCAGGTATTTAAAACAAAAACTGCGATCGGAATTG
TAACTCCCAACCAAGGGGTATAGTCTTCGGCTTTCCCTCTCCTTCAATCG
ATGTCTATGTAACTTGAATAATTACTAGTCCGCCTTAGAAAAATTGATTT
AGGCTGATTTAGGAATCAACTAACGGACTCGTATAGCCTAGTAAACTGAG
CCCGTATTCACAAGGCTAGGACACCCGGCTTATATGTCTATATAGCATTT
TCGGCGCTTTAAAGATTTTTTCATGTTTACAGATTTTAAATTTGCCTTGG
AATACTGTTATTCAGTCACAAACTTACCATCACAGATTTATCCTGAATCA
AACTAGCTTAGATTTCTTGGCTAGGACTCATGCTCCTTTATAGAGGTCTG
CGATTCAGGCAATCATTTTTATATTATAGGTATATATGAAGTTCGAGTGA
TTGGTCAACCTGGTCAATCCAGATACATTGTTTGTAACATGGATCTTATG
GACGGTGGCTGGACGTTGTTTCAACGTAATTACGGTCCATCGCACATTAA
CTTTGGGAAAAGATGGGCAGATTACAAATCAGGTTTTGGTGATCTCAGAT
ATCCATTTTGGGCAGGTAATGCAATGTTTTGCTGTATGATTAGATTTTCA
GCCAGTTATTCAGAAACTCAAATAAAATTCAGATTTTTAAATCGCGTCCG
TCCCAAAAAAAATATGCAGACTTTTAACCTTTTCAAAAATTTCGTAAATG
AAGATATGGTGAAGATTATTAAAAATGATTTAGTTGATTGAAAAACTTGA
ATTTATACTTTCCTAAGTCCTTGACTTCGCTGTTTTTTAGAACTTTTTAA
CTCTTCTGATCAAAGAAGGCTAAGTTTTGACACCATTTTATGAATATTGT
TTTTCAATGTATTAAACTGTATACACCCCCTTCTCACAGACCCACTGGAA
AAATTGGCCAAAATATCGTCCCCGGTGGAAAATTACCTTCCATTTTTGTC
CCCACTGAAAATAATCATATAAACCAATCCTCACTGCAAAATGTAATTCT
CTTTTCCCATTCCCACTGAATTTTCTGACTTGAAAACAAGAAATGAAATC
GCCAGCCATAAAGAAAATGGAAATATCAGTCCGTTGTTTTTATCCCCACT
GGCTGAAAAAAATCCTATCGGGTCTTTGAGAAAGGGGTGTGTATATGTAT
CATTTTTGTTTGGAATTTAGCTTTACGTAATCGAAAAAATCTTTTGCTTG
CTTTTCTATGTGGAATTCTACGTCGATTGGTGAATTATTTGAGAGCGTTT
GGAGAATCTTCAACCTCTGATTATCAAACTTTCGTTGAAACTTTTTTCAA
TTTATGAAGAGGGCTCGCCAGCCAACGTAGATTAACTTTCGCGTGAAATA
CTTAGTGGATTAATTATGGCGATTTTCGCGAATTTTAGTCGTTTTTGCGC
GAAAATTAGTCCTCGCGAAATATTTAAAAATCCAAAATTAGCAAAAAACC
CTAAGGAAATGGAAGAGATTGGGCGATAAAGAGGTAAATTTTGTCCACGC
GAAAATTGTAGATTCTCGATTTGCGAAAGAAATCCCACGCTAAAATTCCA
ACTGGCACACAACGTTGTTTAAAACATTAATCTAACGTTCACAGCGTCCA
TTTAACGTTAGATTAACGTTGAAACAACGTTGTGTGCCAGCCGGGATGAA
TCCACTTTAGGTAAATCGTTTTTTTTAGGGAATGATTTTCTTCATCAACT
GACACAGAATGAAGACACGGAGTTATTGGTAGTCTTGAAAGATCCTGATG
GTGATGATCATTACGCATACTTCACCACGTTCTATATTGATGATGAAAAT
GCAAAATATCGATTGACAATCGGTGGTTATGAAGTTGTGCTAACTCCTGC
TCTTCCCCAACAATCAGGAGCTGAGCAGTTCATGTACCACAATCAAATGG
TATTTGTAACCTCTGATAATGCTCCACTCGGTATTGCTTGCGGCACCCAA
TATAACAATGGGTGGTGGTATAATAATTGTTTTCGAGTTGCTCTAAATGG
TGACCCGAATTTTGTTTTGCCGACTAGTGGTACCAACACACCATTAGGTA
TCATGTGGCGTTTAGAGGTCGGAGGAAATTGGATGATTTTCCGAGAATCA
ACGATGATGGTAAGAAAGAAATGA Coding sequence (CDS) from alignment at sc0000003_pilon:629846..632569- >XLOC_035393 ID=XLOC_035393|Name=XLOC_035393|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2148bp|location=Sequence derived from alignment at sc0000003_pilon:629846..632569- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCATTGTGAAATTTTTGTTTTGTATTTCTTTGTATTTTTGAATCT
AACAAATGCCCTTCAAATGAACAGTTGCAGCAAAGATGATTTCTACCTAC
GCAAAAATGTTGGGCGAAATGTCATCTTTCCTGGAGAGATTATTGATGTT
GAAAATGTGAGAACATATCAACAATGCTTCGGATATTGTCAAAGATATGC
ATGTTCTTTATTCAATTTTGAAGAAGTTGCCGCTGGAAATTTTAAATGCG
GTGTTTATCCAGGACCAGAATTCATATCACGGTATTCGCCGAAAACTCGC
TTTGGAATAGAACCGGTTCATCGATTTTTCTTCGAGAAAGTACCATGCCA
GACAGATGAAAGTTCTGAATATTCATTCAAAGGGACTTTTCTTGAAGCAG
AAAATTGTAAAGAAGTTCAAGAAAATGGCGGTGGTGAAACAGATGGATCA
TTGTGAAATTTTTGTTTTGTATTTCTTTGTATTTTTGAATCTAACAAATG
CCCTTCAAATGAACAGTTGCAGCAAAGATGATTTCTACCTACGCAAAAAT
GTTGGGCGAAATGTCATCTTTCCTGGAGAGATTATTGATGTTGAAAATGT
GAGAACATATCAACAATGCTTCGGATATTGTCAAAGATATGCATGTTCTT
TATTCAATTTTGAAGAAGTTGCCGCTGGAAATTTTAAATGCGGTGTTTAT
CCAGGACCAGAATTCATATCACGGTATTCGCCGAAAACTCGCTTTGGAAT
AGAACCGGTTCATCGATTTTTCTTCGAGAAAGTACCATGCCAGACAGATG
AAAGTTCTGAATATTCATTCAAAGGGACTTTTCTTGAAGCAGAAAATTGT
AAAGAAGTTCAAGAAAATGGCGGTGGTGAAACAGGTATATATGAAGTTCG
AGTGATTGGTCAACCTGGTCAATCCAGATACATTGTTTGTAACATGGATC
TTATGGACGGTGGCTGGACGTTGTTTCAACGTAATTACGGTCCATCGCAC
ATTAACTTTGGGAAAAGATGGGCAGATTACAAATCAGGTTTTGGTGATCT
CAGATATCCATTTTGGGCAGGTATATATGAAGTTCGAGTGATTGGTCAAC
CTGGTCAATCCAGATACATTGTTTGTAACATGGATCTTATGGACGGTGGC
TGGACGTTGTTTCAACGTAATTACGGTCCATCGCACATTAACTTTGGGAA
AAGATGGGCAGATTACAAATCAGGTTTTGGTGATCTCAGATATCCATTTT
GGGCAGGGAATGATTTTCTTCATCAACTGACACAGAATGAAGACACGGAG
TTATTGGTAGTCTTGAAAGATCCTGATGGTGATGATCATTACGCATACTT
CACCACGTTCTATATTGATGATGAAAATGCAAAATATCGATTGACAATCG
GTGGTTATGAAGTTGTGCTAACTCCTGCTCTTCCCCAACAATCAGGAGCT
GAGCAGTTCATGTACCACAATCAAATGGTATTTGTAACCTCTGATAATGC
TCCACTCGGTATTGCTTGCGGCACCCAATATAACAATGGGTGGTGGTATA
ATAATTGTTTTCGAGTTGCTCTAAATGGTGACCCGAATTTTGTTTTGCCG
ACTAGTGGTACCAACACACCATTAGGTATCATGTGGCGTTTAGAGGTCGG
AGGAAATTGGATGATTTTCCGAGAATCAACGATGATGGTAAGAAAGAAAT
GAGGAATGATTTTCTTCATCAACTGACACAGAATGAAGACACGGAGTTAT
TGGTAGTCTTGAAAGATCCTGATGGTGATGATCATTACGCATACTTCACC
ACGTTCTATATTGATGATGAAAATGCAAAATATCGATTGACAATCGGTGG
TTATGAAGTTGTGCTAACTCCTGCTCTTCCCCAACAATCAGGAGCTGAGC
AGTTCATGTACCACAATCAAATGGTATTTGTAACCTCTGATAATGCTCCA
CTCGGTATTGCTTGCGGCACCCAATATAACAATGGGTGGTGGTATAATAA
TTGTTTTCGAGTTGCTCTAAATGGTGACCCGAATTTTGTTTTGCCGACTA
GTGGTACCAACACACCATTAGGTATCATGTGGCGTTTAGAGGTCGGAGGA
AATTGGATGATTTTCCGAGAATCAACGATGATGGTAAGAAAGAAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000003_pilon | genome | sc0000003_pilon:629846..632569 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 631-1074:445 |
| Aaloc | 445-627:1744 |
| Aaloc | 1-441:2725 |
|
