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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000230_pilon:317161..319749+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034996 ID=XLOC_034996|Name=XLOC_034996|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2589bp|location=Sequence derived from alignment at sc0000230_pilon:317161..319749+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATGTTTAAACACGTGCTTTGGGTTTATATATTCCTACTAACGCC
GAATGACTTTTTAAACACAGTGGAATGCGAagattcaaaaaagattttag
cTGCGGAAGGGAGAGAAGTTGTCGTACAATTTGGTCAGGATAACGATGGT
GGAGTCAAAGAGAGCAAACATTTAAAAGGAGTTATAGTACCCCTTGGTAC
AAATTCTCCGTTCGCtaaattcctatctctaaaTAAACGGAATAAAACTG
ATGGGATGGAGAATGATCATAATAAGAACGATTCAAAATTGAATGATTTA
TCAAAAACTGTTTTGTCGAAAGTCCAAGATCTACATGCTCAGACGAACAT
GAGCAAGGACGTATCGTCGAATAGTACATTCGCATCCAATGGTTTTAGAA
ACGAAACAGAGAAAGTGGATACAAATGCGCCAATCTCAGGACAAGATTGG
AATTCATTGCTAGCAAATCTAATATCCAGTTCAAATCCAACCATTAAGCG
AGGCGATAAAGGTGAAACGGAAATCAGAATCGAACTAGATACTAAAGACT
TGGATAGATTTAAGCAACGACCAATGGTAAAAGAAACCAAAACATCGaag
aaaaataatacaataacaAGAATGCCTCCTTTACAAATGAATCGGACGGT
AGATTCAacttttcaacatagaaaatcAAAGACAGGATATGGTAACTTGA
TAGAAAAACAGAAACAGATTCTCGCAAAGAAAGCCAAAGCATTGAGCAAA
ATGGCGAAACTTGCAAGTAAAAACTTAATCGAGATCAAAAGGTTGGAGCT
TGAAGCAATTCGCCAACAAAAGAAATTAGGGGAGGCACAATCAGAGCAAA
GTGACAACAGACAATATTTTATCCAGGAAAAGGAATTCAGTTACGATGAT
TATGACGGGTACAAAGATATTGATGGTTTCGCATCTAAAATCCCACATGA
CGCTTTGGCTATTTTTGAGAATAAACATACAGAAAGCTCATCGAAACCTA
AAGAAAATATCGAGTTTAAAAATAGTAGTTCACTTGGACAAGAAATATTT
AATGCTACCAATGTCATTGTAACGCATCAACATAAAGAAGAACCACAGAT
GTTTCAAGGACCACATGCTTTATCCTTAGTGGGTAATTTCATACCAAGTG
CAGTTGTTAAAAACCCGACCTCTGCAGCTGTAGAAGAGGCCCCCGCTCCA
CCACCAATTGTTCCTATcacaactaccacaactactactactacgaccac
aaccactccatcaccaccaccaccaccagctccacctccgccaccaccac
caccaccaccaccaccgccgccgcctccttcaccgcccacaacgccacca
cctaccacAGCTACTACAGGAATTGTTCCAATAACTACACCAGCGTCAAT
TGTTAACACAACATTATCAGAACTTTCACCAAGTCAATCAGatcttttac
aaaagaatctAGATACTGTATCTTCTCCATCTGCGTCAAGCTCTGGAAAT
AGTCAAGTGAATCTAGCACCATTTGAGATGTCATCAAGCAGTCCACAACA
ATCCCCAAGTGTTTCACAAACCAAAGACGAACAACAGCCGAAAGATGAAA
TGCTGGCGGGAGACAGTATCCCTGCTTCCCCAATGGTTGGTCAAGAGTAC
CACCCAACTGTTAGTAACTCTAGCAATCCAAATGCAAAAGCTGTGGTAGC
ACCAGTCGACAAATCTCCAACAAATTCTAAACCAAACGTAGTAAGCCaag
ataaaaacattgaaattgagAACAAATTAACAAATGGTAAACACCGtatt
aaaattttacttttaaacgAAGATGAAGATAAAGTTCCAAACAAACAGCC
AACATTACATATGTTTAAAccaaaaaatgtgtttgaaACTGGCATCAAAA
AGGAACTGTGTTCAGGAGCCGATTATATAAGATGTCTAGAGAAGAGTAGT
TCAGATAATCGTGTTTTATTCCCAGACGTTGAGAGATCGTCACCGGAGAT
GTCAATGGAAGGACGTAGATTCCATGGAGCTCCCAGTGagaatgaagatt
ttaactttaTGAGAAGCTATCATGAAAAACCGTTCTTTTTATTGAGTAAA
CCTCGTGAAAGAAATTTGTATGGAGATAGAGATAATGAGAACTCGTATGA
GCACGCCAACAGTGCACAAGATGCTAGTAGTAGAACTCTTTATAGAGATG
ATCAGAACTCATATGAAAATGATCGAGAGCCCGGCGAACGACATTTTTTG
AGGACCGATTTAATAAATGCACCTCACGATGTTATTGTTGAGAATCGCAA
TTTCGAAGATGGTAATTATCATGCTGAGGAAGGCAGGAGCCAACATGATA
GACTTTATTCAAACGAAATGGAAGCTCAAAATATGGAGTTTGCTATACAA
AGCGCAGCTGCTGATGCAACTCaaaaaaacactttgaaatctttcgcAAC
TGACGAAGCAGCCTCGTTTAATGGAGCTGTTAAGAATGGCGAGGAGTATT
ATTTTAAACGAAACCAGAAACTAAACTGGAGAAAAACTAAAGAACCAAGA
ATGAAGAATAATCCTTCGTTTAACACATCCAAGATATAA Coding sequence (CDS) from alignment at sc0000230_pilon:317161..319749+ >XLOC_034996 ID=XLOC_034996|Name=XLOC_034996|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5178bp|location=Sequence derived from alignment at sc0000230_pilon:317161..319749+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGATGTTTAAACACGTGCTTTGGGTTTATATATTCCTACTAACGCC
GAATGACTTTTTAAACACAGTGGAATGCGAagattcaaaaaagattttag
cTGCGGAAGGGAGAGAAGTTGTCGTACAATTTGGTCAGGATAACGATGGT
GGAGTCAAAGAGAGCAAACATTTAAAAGGAGTTATAGTACCCCTTGGTAC
AAATTCTCCGTTCGCtaaattcctatctctaaaTAAACGGAATAAAACTG
ATGGGATGGAGAATGATCATAATAAGAACGATTCAAAATTGAATGATTTA
TCAAAAACTGTTTTGTCGAAAGTCCAAGATCTACATGCTCAGACGAACAT
GAGCAAGGACGTATCGTCGAATAGTACATTCGCATCCAATGGTTTTAGAA
ACGAAACAGAGAAAGTGGATACAAATGCGCCAATCTCAGGACAAGATTGG
AATTCATTGCTAGCAAATCTAATATCCAGTTCAAATCCAACCATTAAGCG
AGGCGATAAAGGTGAAACGGAAATCAGAATCGAACTAGATACTAAAGACT
TGGATAGATTTAAGCAACGACCAATGGTAAAAGAAACCAAAACATCGaag
aaaaataatacaataacaAGAATGCCTCCTTTACAAATGAATCGGACGGT
AGATTCAacttttcaacatagaaaatcAAAGACAGGATATGGTAACTTGA
TAGAAAAACAGAAACAGATTCTCGCAAAGAAAGCCAAAGCATTGAGCAAA
ATGGCGAAACTTGCAAGTAAAAACTTAATCGAGATCAAAAGGTTGGAGCT
TGAAGCAATTCGCCAACAAAAGAAATTAGGGGAGGCACAATCAGAGCAAA
GTGACAACAGACAATATTTTATCCAGGAAAAGGAATTCAGTTACGATGAT
TATGACGGGTACAAAGATATTGATGGTTTCGCATCTAAAATCCCACATGA
CGCTTTGGCTATTTTTGAGAATAAACATACAGAAAGCTCATCGAAACCTA
AAGAAAATATCGAGTTTAAAAATAGTAGTTCACTTGGACAAGAAATATTT
AATGCTACCAATGTCATTGTAACGCATCAACATAAAGAAGAACCACAGAT
GTTTCAAGGACCACATGCTTTATCCTTAGTGGGTAATTTCATACCAAGTG
CAGTTGTTAAAAACCCGACCTCTGCAGCTGTAGAAGAGGCCCCCGCTCCA
CCACCAATTGTTCCTATcacaactaccacaactactactactacgaccac
aaccactccatcaccaccaccaccaccagctccacctccgccaccaccac
caccaccaccaccaccgccgccgcctccttcaccgcccacaacgccacca
cctaccacAGCTACTACAGGAATTGTTCCAATAACTACACCAGCGTCAAT
TGTTAACACAACATTATCAGAACTTTCACCAAGTCAATCAGatcttttac
aaaagaatctAGATACTGTATCTTCTCCATCTGCGTCAAGCTCTGGAAAT
AGTCAAGTGAATCTAGCACCATTTGAGATGTCATCAAGCAGTCCACAACA
ATCCCCAAGTGTTTCACAAACCAAAGACGAACAACAGCCGAAAGATGAAA
TGCTGGCGGGAGACAGTATCCCTGCTTCCCCAATGGTTGGTCAAGAGTAC
CACCCAACTGTTAGTAACTCTAGCAATCCAAATGCAAAAGCTGTGGTAGC
ACCAGTCGACAAATCTCCAACAAATTCTAAACCAAACGTAGTAAGCCaag
ataaaaacattgaaattgagAACAAATTAACAAATGGTAAACACCGtatt
aaaattttacttttaaacgAAGATGAAGATAAAGTTCCAAACAAACAGCC
AACATTACATATGTTTAAAccaaaaaatgtgtttgaaACTGGCATCAAAA
AGGAACTGTGTTCAGGAGCCGATTATATAAGATGTCTAGAGAAGAGTAGT
TCAGATAATCGTGTTTTATTCCCAGACGTTGAGAGATCGTCACCGGAGAT
GTCAATGGAAGGACGTAGATTCCATGGAGCTCCCAGTGagaatgaagatt
ttaactttaTGAGAAGCTATCATGAAAAACCGTTCTTTTTATTGAGTAAA
CCTCGTGAAAGAAATTTGTATGGAGATAGAGATAATGAGAACTCGTATGA
GCACGCCAACAGTGCACAAGATGCTAGTAGTAGAACTCTTTATAGAGATG
ATCAGAACTCATATGAAAATGATCGAGAGCCCGGCGAACGACATTTTTTG
AGGACCGATTTAATAAATGCACCTCACGATGTTATTGTTGAGAATCGCAA
TTTCGAAGATGGTAATTATCATGCTGAGGAAGGCAGGAGCCAACATGATA
GACTTTATTCAAACGAAATGGAAGCTCAAAATATGGAGTTTGCTATACAA
AGCGCAGCTGCTGATGCAACTCaaaaaaacactttgaaatctttcgcAAC
TGACGAAGCAGCCTCGTTTAATGGAGCTGTTAAGAATGGCGAGGAGTATT
ATTTTAAACGAAACCAGAAACTAAACTGGAGAAAAACTAAAGAACCAAGA
ATGAAGAATAATCCTTCGTTTAACACATCCAAGATATAAATGATGATGTT
TAAACACGTGCTTTGGGTTTATATATTCCTACTAACGCCGAATGACTTTT
TAAACACAGTGGAATGCGAagattcaaaaaagattttagcTGCGGAAGGG
AGAGAAGTTGTCGTACAATTTGGTCAGGATAACGATGGTGGAGTCAAAGA
GAGCAAACATTTAAAAGGAGTTATAGTACCCCTTGGTACAAATTCTCCGT
TCGCtaaattcctatctctaaaTAAACGGAATAAAACTGATGGGATGGAG
AATGATCATAATAAGAACGATTCAAAATTGAATGATTTATCAAAAACTGT
TTTGTCGAAAGTCCAAGATCTACATGCTCAGACGAACATGAGCAAGGACG
TATCGTCGAATAGTACATTCGCATCCAATGGTTTTAGAAACGAAACAGAG
AAAGTGGATACAAATGCGCCAATCTCAGGACAAGATTGGAATTCATTGCT
AGCAAATCTAATATCCAGTTCAAATCCAACCATTAAGCGAGGCGATAAAG
GTGAAACGGAAATCAGAATCGAACTAGATACTAAAGACTTGGATAGATTT
AAGCAACGACCAATGGTAAAAGAAACCAAAACATCGaagaaaaataatac
aataacaAGAATGCCTCCTTTACAAATGAATCGGACGGTAGATTCAactt
ttcaacatagaaaatcAAAGACAGGATATGGTAACTTGATAGAAAAACAG
AAACAGATTCTCGCAAAGAAAGCCAAAGCATTGAGCAAAATGGCGAAACT
TGCAAGTAAAAACTTAATCGAGATCAAAAGGTTGGAGCTTGAAGCAATTC
GCCAACAAAAGAAATTAGGGGAGGCACAATCAGAGCAAAGTGACAACAGA
CAATATTTTATCCAGGAAAAGGAATTCAGTTACGATGATTATGACGGGTA
CAAAGATATTGATGGTTTCGCATCTAAAATCCCACATGACGCTTTGGCTA
TTTTTGAGAATAAACATACAGAAAGCTCATCGAAACCTAAAGAAAATATC
GAGTTTAAAAATAGTAGTTCACTTGGACAAGAAATATTTAATGCTACCAA
TGTCATTGTAACGCATCAACATAAAGAAGAACCACAGATGTTTCAAGGAC
CACATGCTTTATCCTTAGTGGGTAATTTCATACCAAGTGCAGTTGTTAAA
AACCCGACCTCTGCAGCTGTAGAAGAGGCCCCCGCTCCACCACCAATTGT
TCCTATcacaactaccacaactactactactacgaccacaaccactccat
caccaccaccaccaccagctccacctccgccaccaccaccaccaccacca
ccaccgccgccgcctccttcaccgcccacaacgccaccacctaccacAGC
TACTACAGGAATTGTTCCAATAACTACACCAGCGTCAATTGTTAACACAA
CATTATCAGAACTTTCACCAAGTCAATCAGatcttttacaaaagaatctA
GATACTGTATCTTCTCCATCTGCGTCAAGCTCTGGAAATAGTCAAGTGAA
TCTAGCACCATTTGAGATGTCATCAAGCAGTCCACAACAATCCCCAAGTG
TTTCACAAACCAAAGACGAACAACAGCCGAAAGATGAAATGCTGGCGGGA
GACAGTATCCCTGCTTCCCCAATGGTTGGTCAAGAGTACCACCCAACTGT
TAGTAACTCTAGCAATCCAAATGCAAAAGCTGTGGTAGCACCAGTCGACA
AATCTCCAACAAATTCTAAACCAAACGTAGTAAGCCaagataaaaacatt
gaaattgagAACAAATTAACAAATGGTAAACACCGtattaaaattttact
tttaaacgAAGATGAAGATAAAGTTCCAAACAAACAGCCAACATTACATA
TGTTTAAAccaaaaaatgtgtttgaaACTGGCATCAAAAAGGAACTGTGT
TCAGGAGCCGATTATATAAGATGTCTAGAGAAGAGTAGTTCAGATAATCG
TGTTTTATTCCCAGACGTTGAGAGATCGTCACCGGAGATGTCAATGGAAG
GACGTAGATTCCATGGAGCTCCCAGTGagaatgaagattttaactttaTG
AGAAGCTATCATGAAAAACCGTTCTTTTTATTGAGTAAACCTCGTGAAAG
AAATTTGTATGGAGATAGAGATAATGAGAACTCGTATGAGCACGCCAACA
GTGCACAAGATGCTAGTAGTAGAACTCTTTATAGAGATGATCAGAACTCA
TATGAAAATGATCGAGAGCCCGGCGAACGACATTTTTTGAGGACCGATTT
AATAAATGCACCTCACGATGTTATTGTTGAGAATCGCAATTTCGAAGATG
GTAATTATCATGCTGAGGAAGGCAGGAGCCAACATGATAGACTTTATTCA
AACGAAATGGAAGCTCAAAATATGGAGTTTGCTATACAAAGCGCAGCTGC
TGATGCAACTCaaaaaaacactttgaaatctttcgcAACTGACGAAGCAG
CCTCGTTTAATGGAGCTGTTAAGAATGGCGAGGAGTATTATTTTAAACGA
AACCAGAAACTAAACTGGAGAAAAACTAAAGAACCAAGAATGAAGAATAA
TCCTTCGTTTAACACATCCAAGATATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000230_pilon | genome | sc0000230_pilon:317161..319749 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-2589:1 |
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