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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000299_pilon:240376..243030+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034940 ID=XLOC_034940|Name=XLOC_034940|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2655bp|location=Sequence derived from alignment at sc0000299_pilon:240376..243030+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGAttttatcagtttttgttttgttggtttttgtcaGTCTGTGCTT
GGCCAAGAAAGGATATTAtcgaaaaattcaagatggtagaTTCAAACCTG
TGCGTGTTATACGTCCAAAAGTTCTCACTCAGTTTGACAAAAATAAGGTA
AGGATAACATTTCTTATAGTCCCTTCTTTTTGTCAACAAAAGATTGCACA
TGGATAGAGTCGGATAGCGTAAAACCAAAATTCCTTAAAATGATTTATGT
ATTTTGATGCAATGTATGTACTTAACTTCTCTGAGTTGTAAGCCTAAAAT
TTTCcgtaaatgttcttattttcactattttgtgagtttttgtgtaattt
cctaagaaattgggtgttctagagtccgcaaagccttaaaatgaaacttg
ttcttagtattttgtccTTCGAAGCCTtgttttcttatatagtttgtata
AAGTGTATTTGTTGCTTATTTGTAGATGGAAGTTGCAAATAAGATGAAGA
AAGTAAAAAACATGGAAGattttttgagagttttcaaAGTGCCTTATggt
aaaaaatttttgttaccccctgtCTCATTGACAATCCCAATCCAGACAAT
TTCCTCCAATGTGAAACTACATAATCTGAATCCCAGATCTCCTAAAATCT
CGAGTTATGGAATAACATTAGGCTAGTAGAACACAAAAATGTTTTCGTCG
TCTTCTCAAACAGGTAATTTTGAGCAATAAGAACTACGTTGCATTCTTTT
CTAAAATGTTTGTAATTAAGATATtaattttgatcttcttttTCTACAGC
GTGTCTCCAAACCAAAATAATctttacaattttatttttcagttaaaaAG
AGACGGATAAGCCTTGCTAAACCACAAGGAGAAACACATACTCTTCTCGA
AACACATACTACTCTTCTCGGAACAACAGATTCTGATTCGAAACTGGAAG
CTCCAGAGTtcgaatttttcattaaaaagtcaACGATCGGGAAAGAACAA
TCTCTTGTTGGTGAAAGCAATAGACACACGATACTGGGAACATCAGAGAA
GTCTTCTGAATCTGTCAAACTCAGTTAGTAACATCTAATTCTAATTCAAT
ATTCTCATGTTAGGCAACATTTGCGACAAAAACGGTACTCTTGTTAAATC
TTACGTATATAATTAATAAGTAATCTAAAGGGGTCTAAATCTTCGAAGAC
TGATGGACAATCTTTCAAACTCTATATTTTTGATGCCCTAACAATAGCGT
TGTAGCAGAGGGCGACACTAGTGATCGACTTAATTCCTTGACTCGCCACG
CTACCGCCTAACATATTTTATCgcccaaattttgaaaataaagcaGCTGA
AACAAAAAGGAGGATAGACTTATACTCAAATAAGTGAAATCTATTCACCG
TTTCTCAATATTTCGTAACTTATTTCACTTCTAGGTGATGAAGATTTAGG
CTGTCAACCTCGGCCAACCATATACAGCCTCACTGCAAGTTACAATTACT
TCGATTACCCTTCGTGTTTCACCCTATACCAATGTGGTGGTTGCTGTAAT
TCAAAACCTGGATATATTTGTCGACCGACTGAACTATCTGTTAAAACTGT
ATCTCACGTGAGGCTGTCATATATTACAAGTGAGTTTTTACGGTTAACTC
TTTTGAACTCCTCATGCTTAGGCTATCTATCGTCATCTCCCCCATTGTTT
AGAGTgtaaatttcctaattttcaAGTTTGGTGCTGTCTATTGTGTCGCC
GCCGACAAAATCTCTTtttacgcttacctaactcctacacTCACTTTTCT
CGCGtaataccgttccagcccgaccgGCGTGCCAGTCTAGGGTTTGCTAA
AACTGTGTAAAGAATTTTCATTAATCAATATTCTAATACCAATTTCTCCG
CCTTTCCCTTTAAGACCGATATACTCAAGAGACAGTGCGGTTGAATCACC
ACAAGAAATGTGAATGCAGGTGTAAGATAGATGCCACAGACTGTTCACCT
ACACAAACGTTTGATCCAAATCTTTGCACGTGTGTTTGCAGCGGACAACT
ACAACCTTGTGCTGAAAACAAAGTGGTAATTTCTAGTTTTCCGTTTTAAC
TTTGAGGTTAAGGTAGGCCCTGAAACCCGAAAAAACATTATCGTTATTCG
AAGTGAGATAGTGTTTCCATTGGATCTGCTTATCTAACTCAGGCAAAAAC
ACTCTCATTATTCGAAGCGAGTTTTATTCGCCTTGAGACAAATTACAGGC
TATACTAAATCGCCCTTAGTTATTTGAACTTTTCTAATTGGGAGATGGTA
GAGTGAGGACATTGATTTTTTCTGCGATTGAAGAattcccggttattcga
agtaaattttTATCCCCTTGGAGCTTCGTGTATGTTGGAAATTCGACTTC
TTCTTTTCCTAGCGTAATTACTGATAATTCTCTTTTTCTTAGTCTCTAAG
GgtcaaatttcgattttttgctcTGATCTTCTTTTACTTTAAGTGGTCGA
ACAACGAATGTGGGTGTCTTTGCAAGACTTCACCTCAAAGATGCCCCTTC
AGGAAAGAATGGGACAAAACAAAGTGCAGTTGTCAATGCATCCCTAAGAA
ATGTGGAGTTGGAGAGTCACAAGATCCCACCACTTGCTATTGTGCCAAAA
TATGA Coding sequence (CDS) from alignment at sc0000299_pilon:240376..243030+ >XLOC_034940 ID=XLOC_034940|Name=XLOC_034940|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1938bp|location=Sequence derived from alignment at sc0000299_pilon:240376..243030+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGGAttttatcagtttttgttttgttggtttttgtcaGTCTGTGCTT
GGCCAAGAAAGGATATTAtcgaaaaattcaagatggtagaTTCAAACCTG
TGCGTGTTATACGTCCAAAAGTTCTCACTCAGTTTGACAAAAATAAGATG
AGGAttttatcagtttttgttttgttggtttttgtcaGTCTGTGCTTGGC
CAAGAAAGGATATTAtcgaaaaattcaagatggtagaTTCAAACCTGTGC
GTGTTATACGTCCAAAAGTTCTCACTCAGTTTGACAAAAATAAGATGGAA
GTTGCAAATAAGATGAAGAAAGTAAAAAACATGGAAGattttttgagagt
tttcaaAGTGCCTTATgATGGAAGTTGCAAATAAGATGAAGAAAGTAAAA
AACATGGAAGattttttgagagttttcaaAGTGCCTTATgttaaaaAGAG
ACGGATAAGCCTTGCTAAACCACAAGGAGAAACACATACTCTTCTCGAAA
CACATACTACTCTTCTCGGAACAACAGATTCTGATTCGAAACTGGAAGCT
CCAGAGTtcgaatttttcattaaaaagtcaACGATCGGGAAAGAACAATC
TCTTGTTGGTGAAAGCAATAGACACACGATACTGGGAACATCAGAGAAGT
CTTCTGAATCTGTCAAACTCAttaaaaAGAGACGGATAAGCCTTGCTAAA
CCACAAGGAGAAACACATACTCTTCTCGAAACACATACTACTCTTCTCGG
AACAACAGATTCTGATTCGAAACTGGAAGCTCCAGAGTtcgaatttttca
ttaaaaagtcaACGATCGGGAAAGAACAATCTCTTGTTGGTGAAAGCAAT
AGACACACGATACTGGGAACATCAGAGAAGTCTTCTGAATCTGTCAAACT
CAGTGATGAAGATTTAGGCTGTCAACCTCGGCCAACCATATACAGCCTCA
CTGCAAGTTACAATTACTTCGATTACCCTTCGTGTTTCACCCTATACCAA
TGTGGTGGTTGCTGTAATTCAAAACCTGGATATATTTGTCGACCGACTGA
ACTATCTGTTAAAACTGTATCTCACGTGAGGCTGTCATATATTACAAGTG
ATGAAGATTTAGGCTGTCAACCTCGGCCAACCATATACAGCCTCACTGCA
AGTTACAATTACTTCGATTACCCTTCGTGTTTCACCCTATACCAATGTGG
TGGTTGCTGTAATTCAAAACCTGGATATATTTGTCGACCGACTGAACTAT
CTGTTAAAACTGTATCTCACGTGAGGCTGTCATATATTACAAACCGATAT
ACTCAAGAGACAGTGCGGTTGAATCACCACAAGAAATGTGAATGCAGGTG
TAAGATAGATGCCACAGACTGTTCACCTACACAAACGTTTGATCCAAATC
TTTGCACGTGTGTTTGCAGCGGACAACTACAACCTTGTGCTGAAAACAAA
GTGACCGATATACTCAAGAGACAGTGCGGTTGAATCACCACAAGAAATGT
GAATGCAGGTGTAAGATAGATGCCACAGACTGTTCACCTACACAAACGTT
TGATCCAAATCTTTGCACGTGTGTTTGCAGCGGACAACTACAACCTTGTG
CTGAAAACAAAGTGTGGTCGAACAACGAATGTGGGTGTCTTTGCAAGACT
TCACCTCAAAGATGCCCCTTCAGGAAAGAATGGGACAAAACAAAGTGCAG
TTGTCAATGCATCCCTAAGAAATGTGGAGTTGGAGAGTCACAAGATCCCA
CCACTTGCTATTGTGCCAAAATATGATGGTCGAACAACGAATGTGGGTGT
CTTTGCAAGACTTCACCTCAAAGATGCCCCTTCAGGAAAGAATGGGACAA
AACAAAGTGCAGTTGTCAATGCATCCCTAAGAAATGTGGAGTTGGAGAGT
CACAAGATCCCACCACTTGCTATTGTGCCAAAATATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000299_pilon | genome | sc0000299_pilon:240376..243030 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 805-966:2494 |
| Aaloc | 646-804:1917 |
| Aaloc | 451-642:1437 |
| Aaloc | 286-447:911 |
| Aaloc | 223-285:845 |
| Aaloc | 148-219:476 |
| Aaloc | 1-147:1 |
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