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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000299_pilon:324888..327762- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034886 ID=XLOC_034886|Name=XLOC_034886|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2875bp|location=Sequence derived from alignment at sc0000299_pilon:324888..327762- (Clytia hemisphaerica_ch_hm2_pilon)
AAGAGACGTAGAGAGACTGTACTTTTACATGCGAGCAAAAAGATGGGCTG
GAAAACCAAAACATTCATTTTTCTGTTACCGATCATCGGATATTTCACGT
ATAAGTATCTCACTGATAATTTCTTATCACATGTTATAACGATCAGTAAC
ATATACCCAAATCTTCCAATCGAAAATTTCGCAAAATTAAATCCTGATAT
TGGAGATTTCGCAACGCCAGATAATAAGATCTTGCCAAGATATGACTTTG
TAGTGATCGGTGCTGGATCGGCTGGAGCTGTCGTTGCCAGGCGTTTGAGT
GAAAACAAATCATGGAAGATTCTCTTACTAGAGGCTGGTGGTGGCACCAA
TATCTTGACCGAGATTCCGGGTCTTCTCTTCAACAATTTTATGTCATCTA
ATGACTGGTCATATAGAACTGAAGCAGCCAAAGATGGAAAAACATCAAGT
ATACATACTAAAGGTCAAGTGATTTGGCCCAGAGGTAAATTACTTGGAGG
AAGCAGTTCCATAAACGGGTTAGTCTATGCTAGAGGTAATAAACTAGATT
ATAACCTATGGTCTGATCAAGGAAACCCAGGATGGAGCTATAAAGATGTG
TTACCATACTACTTAAAATCTGAAGACCAACGAATCAAAAACCTAGCCAA
GGATACAGAGCATCATTCTACAGGTGGTCGTCTGACAATCGAGGATGTTG
ACCGAAAAGGAATTTTTCACAAACTTATGGAAGGTTGTAAGAAGGTGTTA
CCAGAAAACCATGACTACAACGGTGGCACACAGACTGGATGTGTTTATTA
CCAAAACACAAAGACAAATGGACAACGATGTAGCACGGCTAACGCGTTTT
TGAAGAACCCGCCATCAAATTTACATATAAGCCCCCTGTCACACGTTCTA
CAAATATCAATCCATGAAGATACACATCAAGCTACAGGTGTGGTGTATAA
GAAGAATGGTAAAGTGGTGATAGTCGATGCTAGGAAAGAAGTCATCCTGT
CTGCTGGTGCTATTGCATCTCCACAGGTACGAGATTATGTTTTCAAGCAT
TTTCAAGCAAATAAAAAGATTTTTCCAGTTATGATTAGTAAACCATTCTT
TTATTTCCTGAAATGTTTTAGAATAGTTTATAACCCCTCCCTTGGGAAAA
TTACATTAAGTCATAGGAGGTTCCAAAAGAAAAATGCAAAAGCCTTTCCT
TAGAACCACTGGGAATTTTTCTTGAAATACCCCCTTTGTGAATATATCAT
GGAATTGCCCAATATTAGTCTCGAATTTGAGCCAAACATAGACAAACACA
AAAAAAACCCCTGTCTCACAGCCCCTATAGAACATTTTTCCCTAATGAGG
ATGAAAATTTCTATCGAAAACCTAATAGAGATAGAAATTCTATTGTTTCC
AGGTCGAAAAATTAAGTGGGGATGGTTTTGGAGGACAATTTATGCCATTG
ATTTTCAAATGGGAATACAAAATGAAATGAAAATTTCCCAGTGGGCCTGA
AATTGTGTGGTTTTTTCCCACCAGGAACAAAAGTTTGGCCAAATTTTCAA
GTGGGGCAGAGGGATGTCAAAGATTTCCAACCTTTAAAAAAACTTATTCT
TTTTTAGTGTGTACAGGAACAGAAAACATACAAAGACGTGATACAAACTT
GAGACTGATTTATATTATCCAAAATCTTGACTTTAGATTTTGATGCTATC
AGGTGTAGGACCCAAAGAGGAGCTTGAAAAACATGGTATACCACTCATCA
AAGACCTCCCCGTTGGACAAAACTTGCAAGACCATGTGAACGTTGCACAC
CACATGACGTTCAATGAATCCATCGAAACTTTGCCAGAACAGTAAGTCAA
TGTTAATCATCCACCCAAGTAAGCAAACGTATTTAACATTCCCGCTAATA
TTTCTCGATAAAAGAAATACTACTTTCGGTGAATCGGTGGAATTCAATTT
AGTCCTTTGAAACTTCATCTCTAACAAGGTTTTTCATTATCATTCTAAAG
ACAAATTCCATTCACAGTTTTCAGACATTTGAAACTTACAAAGAATATCA
CCAACATCGAACCGGTCTTCTCTCATCTGGCATCGTTCTCGGTGCATTCA
TGCCAGCATCTGAAAAAGCAAAGAAAAATGATTGGCCTGAAATTCAAACA
CATTTTTATCCACACTTGATAACATCACTCCCTGTATATCAACAAATTTT
CAACTTCAATGAAGAGTACTGGAGAAATGTTATGCTGAAGGAATTGGAAG
GGAAGAATGGTGTCACTTTTGTCAACTGTCTTCTACGGCCAAAGAGCAGG
TTTGGATGGTTGTTATTTATGAAAAGTTAAAGCTTTGTTTGGTTGATGTA
TAAAAACACAGTTGACACTCTCTAATTCGATTTTCAAGGAGGGTTGAAAA
AGGGAGCGTATCAAATACTAACGCGTTGTTTATGAGTGTTTCTTGCTGAC
GGTGACTTTTAATATTAACGAATAATGGAGCGTATCGAATAGTAGAGCGT
GGTTTATGAGTGTTTCTTGTTGATAGTGACTTTTAATAATATCGAATAAT
GAAGCGTATCGAAAATTAGAATTTCGAATTAGAGAATTGAAAAACAGTTG
TTAACCGGCAAGGTGGAGGGTAAGCGCCCCATATTGCTTGGTCTAAAGAA
ATTCTCAATAACTGAGTGAAATATCTCAACCTTTGACTATCTTTCAGAGG
GCACATAAAATTGAGAAGCGCGAAGGCTGACGACCATCCAATCATCACCA
CAAATTATTTTGAGCATCCCGACGATCTCACGACCTTCGTTGAGGCCTTC
AAGTTCGGGAAGAAACTGGCAGCGGCACTACCTCAATATAATGCTACACT
CGTTGATTTGAACGATCCAACTTGC Coding sequence (CDS) from alignment at sc0000299_pilon:324888..327762- >XLOC_034886 ID=XLOC_034886|Name=XLOC_034886|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3282bp|location=Sequence derived from alignment at sc0000299_pilon:324888..327762- (Clytia hemisphaerica_ch_hm2_pilon)
AAGAGACGTAGAGAGACTGTACTTTTACATGCGAGCAAAAAGATGGGCTG
GAAAACCAAAACATTCATTTTTCTGTTACCGATCATCGGATATTTCACGT
ATAAGTATCTCACTGATAATTTCTTATCACATGTTATAACGATCAGTAAC
ATATACCCAAATCTTCCAATCGAAAATTTCGCAAAATTAAATCCTGATAT
TGGAGATTTCGCAACGCCAGATAATAAGATCTTGCCAAGATATGACTTTG
TAGTGATCGGTGCTGGATCGGCTGGAGCTGTCGTTGCCAGGCGTTTGAGT
GAAAACAAATCATGGAAGATTCTCTTACTAGAGGCTGGTGGTGGCACCAA
TATCTTGACCGAGATTCCGGGTCTTCTCTTCAACAATTTTATGTCATCTA
ATGACTGGTCATATAGAACTGAAGCAGCCAAAGATGGAAAAACATCAAGT
ATACATACTAAAGGTCAAGTGATTTGGCCCAGAGGTAAATTACTTGGAGG
AAGCAGTTCCATAAACGGGTTAGTCTATGCTAGAGGTAATAAACTAGATT
ATAACCTATGGTCTGATCAAGGAAACCCAGGATGGAGCTATAAAGATGTG
TTACCATACTACTTAAAATCTGAAGACCAACGAATCAAAAACCTAGCCAA
GGATACAGAGCATCATTCTACAGGTGGTCGTCTGACAATCGAGGATGTTG
ACCGAAAAGGAATTTTTCACAAACTTATGGAAGGTTGTAAGAAGGTGTTA
CCAGAAAACCATGACTACAACGGTGGCACACAGACTGGATGTGTTTATTA
CCAAAACACAAAGACAAATGGACAACGATGTAGCACGGCTAACGCGTTTT
TGAAGAACCCGCCATCAAATTTACATATAAGCCCCCTGTCACACGTTCTA
CAAATATCAATCCATGAAGATACACATCAAGCTACAGGTGTGGTGTATAA
GAAGAATGGTAAAGTGGTGATAGTCGATGCTAGGAAAGAAGTCATCCTGT
CTGCTGGTGCTATTGCATCTCCACAGAAGAGACGTAGAGAGACTGTACTT
TTACATGCGAGCAAAAAGATGGGCTGGAAAACCAAAACATTCATTTTTCT
GTTACCGATCATCGGATATTTCACGTATAAGTATCTCACTGATAATTTCT
TATCACATGTTATAACGATCAGTAACATATACCCAAATCTTCCAATCGAA
AATTTCGCAAAATTAAATCCTGATATTGGAGATTTCGCAACGCCAGATAA
TAAGATCTTGCCAAGATATGACTTTGTAGTGATCGGTGCTGGATCGGCTG
GAGCTGTCGTTGCCAGGCGTTTGAGTGAAAACAAATCATGGAAGATTCTC
TTACTAGAGGCTGGTGGTGGCACCAATATCTTGACCGAGATTCCGGGTCT
TCTCTTCAACAATTTTATGTCATCTAATGACTGGTCATATAGAACTGAAG
CAGCCAAAGATGGAAAAACATCAAGTATACATACTAAAGGTCAAGTGATT
TGGCCCAGAGGTAAATTACTTGGAGGAAGCAGTTCCATAAACGGGTTAGT
CTATGCTAGAGGTAATAAACTAGATTATAACCTATGGTCTGATCAAGGAA
ACCCAGGATGGAGCTATAAAGATGTGTTACCATACTACTTAAAATCTGAA
GACCAACGAATCAAAAACCTAGCCAAGGATACAGAGCATCATTCTACAGG
TGGTCGTCTGACAATCGAGGATGTTGACCGAAAAGGAATTTTTCACAAAC
TTATGGAAGGTTGTAAGAAGGTGTTACCAGAAAACCATGACTACAACGGT
GGCACACAGACTGGATGTGTTTATTACCAAAACACAAAGACAAATGGACA
ACGATGTAGCACGGCTAACGCGTTTTTGAAGAACCCGCCATCAAATTTAC
ATATAAGCCCCCTGTCACACGTTCTACAAATATCAATCCATGAAGATACA
CATCAAGCTACAGGTGTGGTGTATAAGAAGAATGGTAAAGTGGTGATAGT
CGATGCTAGGAAAGAAGTCATCCTGTCTGCTGGTGCTATTGCATCTCCAC
AGATTTTGATGCTATCAGGTGTAGGACCCAAAGAGGAGCTTGAAAAACAT
GGTATACCACTCATCAAAGACCTCCCCGTTGGACAAAACTTGCAAGACCA
TGTGAACGTTGCACACCACATGACGTTCAATGAATCCATCGAAACTTTGC
CAGAACAATTTTGATGCTATCAGGTGTAGGACCCAAAGAGGAGCTTGAAA
AACATGGTATACCACTCATCAAAGACCTCCCCGTTGGACAAAACTTGCAA
GACCATGTGAACGTTGCACACCACATGACGTTCAATGAATCCATCGAAAC
TTTGCCAGAACATTTTCAGACATTTGAAACTTACAAAGAATATCACCAAC
ATCGAACCGGTCTTCTCTCATCTGGCATCGTTCTCGGTGCATTCATGCCA
GCATCTGAAAAAGCAAAGAAAAATGATTGGCCTGAAATTCAAACACATTT
TTATCCACACTTGATAACATCACTCCCTGTATATCAACAAATTTTCAACT
TCAATGAAGAGTACTGGAGAAATGTTATGCTGAAGGAATTGGAAGGGAAG
AATGGTGTCACTTTTGTCAACTGTCTTCTACGGCCAAAGAGCAGTTTTCA
GACATTTGAAACTTACAAAGAATATCACCAACATCGAACCGGTCTTCTCT
CATCTGGCATCGTTCTCGGTGCATTCATGCCAGCATCTGAAAAAGCAAAG
AAAAATGATTGGCCTGAAATTCAAACACATTTTTATCCACACTTGATAAC
ATCACTCCCTGTATATCAACAAATTTTCAACTTCAATGAAGAGTACTGGA
GAAATGTTATGCTGAAGGAATTGGAAGGGAAGAATGGTGTCACTTTTGTC
AACTGTCTTCTACGGCCAAAGAGCAGAGGGCACATAAAATTGAGAAGCGC
GAAGGCTGACGACCATCCAATCATCACCACAAATTATTTTGAGCATCCCG
ACGATCTCACGACCTTCGTTGAGGCCTTCAAGTTCGGGAAGAAACTGGCA
GCGGCACTACCTCAATATAATGCTACACTCGTTGATTTGAACGATCCAAC
TTGCAGGGCACATAAAATTGAGAAGCGCGAAGGCTGACGACCATCCAATC
ATCACCACAAATTATTTTGAGCATCCCGACGATCTCACGACCTTCGTTGA
GGCCTTCAAGTTCGGGAAGAAACTGGCAGCGGCACTACCTCAATATAATG
CTACACTCGTTGATTTGAACGATCCAACTTGC
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000299_pilon | genome | sc0000299_pilon:324888..327762 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1465-1641:178 |
| Aaloc | 1183-1461:858 |
| Aaloc | 1027-1179:1190 |
| Aaloc | 1-1026:2876 |
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