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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000092_pilon:705805..710432+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034759 ID=XLOC_034759|Name=XLOC_034759|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4628bp|location=Sequence derived from alignment at sc0000092_pilon:705805..710432+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCCAGGAAAACGAAGCTATTTATTTGACGAAGTTTATCAAAACCTTTGT
GACTTATTACACGCACTCAAAAGCTAGATGGGTTGACCTGGCTGATGTAT
GTCATTATCATATCACattttaatacaccttttcgacggtatccgccaat
tgccgcgcgggcatttctTTGTCCGTtctaccaccctaaaaccgtcccag
tcttttttacgcacctatagacaatagaaaaaggtgtaaaaaaggattgg
atcgagtttagggggataattgaATAGCAAAGTGGCACACGCCTGAccgt
gcgactacggtcgaaaagggtACACTTTACGCTAATTCTCAGAAGATAAT
TAATTAAATCTAATTTAAATTTAATACTTTAATGAGAAAAAACTTTGTCg
atatcaaattttttgaatttgcgGATTTTTGTGTTAATTCATCCGGTAAA
CAAAGGTCCtgatgaaaatctaaaaaaaaaaaaacgcgaaaTAAATTTAA
ACGACATTTCAAAtggcaatttttttattttcaacttatGAAGTCTTAGG
ATTTTGCGAATAAGTATCAAGAGCGAAATTTTATCTCAGAGCCTTTTAAA
AAATCAACGTTGGAGTAATGTCGACTGTAAGGAAAAATGATTTACCTTAA
TTTACAGAAACAGAGATGATCCTTATTACCCTagcacgcaacgttgtttc
aacgttaatccaATAGATGTTACGGACGTCAGAtggacgtcaaaacaacg
tagtgtgtcagctgggtaaaGATCTATCTAAAAATCTATATACATTCTTT
CTTAGATGTTTCGATACTTGGAGCCGTTCCTTCTTCCACACGCTTTCTCG
GATGTTCGTGGTCGTCTCAAATACTCCTCTGTTGATGTGATGCAGGTATA
AAATTGTTACAACAGTTgaaactctctaattcgatcttcaaggcaccaaa
aattttattcgaattagagaaatattatatagagggtaatttaaaccact
ttccgAACCAcctagtttgagttagaaatcgtcatttttggtctaattcG
TAGGAGTTAGATTGGGCTTCATGggcaagcaaaaaaagtgaaattttcca
gcgagattttaaggccaaaaagtaaaaaaaaatgcaaatatttGAGAGTT
TGATCGTTGTTTGGCCATTTtcggtcaacgagtgatccaagaacctctaA
ATTTGGCCctattttactttattctgtcctctagcgaattGGTTTGATGT
TTTACGACTGGCACCTTTCCGTCATTTAGTCAGGTTCCgcgctatccaac
gagctatggaCGAGCTTCTAACACTTTCAAGATCCGGACATATaaacctt
taaaatttgaactagcgattttcttaaaaagcttAGAAGAAAAGGACCGT
GGCATTTAAAGGGTTAATATTtatgatttcattatttttgatgaTCATCA
GATTTGGACGTATTACAACGATGACCACACAGATACTATGGATGGAGACG
AAATTATGGtaacagtttttttataagaagattcaaaatttaagaacatt
tttataacTGTATAACATACAGTGCACGAACAAATTAAGAACTAGTTTGT
TggtacaccccttctcacagcctCACTGGGAACCCTTTCCCACGggaaaa
atttaccaaaatacaGTATCGTCCCCGGTAAAAattttactctaattttt
gtccccgctgaaaataatcagataagcaaatcttTACTGAAAATCATTGT
TCTactttttccatccccactgaattctATTGCtcaaaaaacaatggaat
tcaaatccccagccataataaaaaattgggaatatcaatccccattcaGT
TTTGGTCCGCtttttttaaccactggctgaaaaaatcttaccagGTCTAT
GAGATGGTGGTGTGCTGGTTCTTCATAATagaaaaattcatgattttccG
TATCCATCATTTCAGGTGTTTGTCTTTGACATGTTACAAAATCCGAAGCA
GCGATGTAACCCAAAGATTATTGACAGTTTGACTGCAAAACTTGTAAGTt
aagtaaaattataaaaaaattgagaacaagTTTTTCTTCTAGACTGGGTT
TCCCATTTTTTGAGATAAGGAAAATTAATTTGAGGGAATTTATTAGTGAA
ACTTTGTGAACTTTGTGTTATTAGCGTGAcagataaaaaatatgaaattc
ttAAGATAAGTTAGTAAAAGTTTCTTTGATCGAAAATTTATTAGTGAAGT
GGCTCTTAGGGGCACTTTTTCATTAGATATCCCACACATTCTGCAAATCC
CCTGGACGAGGACCCCAggcggttttcgtgatgacgtgatagagactttt
ttgtagcgtgattacgtgatttggagaTATTTTCTTTGTGATTGCGTGAT
GAAAGGCCAAAACGTGATttgaactttttcaaagggatgcgtgatcaTCC
AAATTTATTGCTGATTTTCTTGATCGTGATCGAagacaaaaattgcgtga
tatcgtgatcagagtaaTCGCTGGGAAGGAGTCCTCCTGATGACTAACAT
CAGCTTTGCTACTAGCATCTAGTATTTTGCGTGATacctaaagaaatatg
aaattttttagtATATGGTGGGATAAACACCTGGATTTCTTCAAAACTTT
AGCAGAGTTATTCAAATACAATTCCCGGAGAAAATATCGACATTTTTAAA
ATTCGCGGAGTACAAGAGTGTGAAAATCATATAATCTGTTCCAATAAAAA
ACTCAAAGTTTTAGACAATGTTGATTTAAAAGAATCGTTACGTTTTGTTT
CTTGAATATTTAGATTGAATTGTCTGGTGAAGAAGAAGTGACACTCAGAG
GATTTTCAAAGTAAGTCACTTATTCTTTAACAATACagctctctaattca
attttcaaaggttattggattttcatcgaataagggagcgtatggAATAT
TAGAGCGtggtttatgagagtttcttgtcgATGGTGATTTTAAATaatat
cgaataatggagcgtgtCAAATAGaagaatgtcgaattagagagcatcaa
ctgtagaTCATTTCTGCATTCATTGAAGGTAAACGCGATCACAAAATGTT
TCCGTTTTTTGATAGatattaattttcaatttaCTCGTGACTGTTATTTT
AAGCACtaatttaattttctattaCATTTTACTCTTATTGTTATCTTCTT
AAGCACGTAAGCACTGAGTTAATTATTTATTGTATAGGTTGTTACCACTT
GAAGACAGCATCATGGACCAATACAAAGACATCACAAAATTGGATCGAAA
AGCGACTTTGCGTGTATTAGCCTTCTATGATCAGGTGAGTTTACAATGCC
AATAAACTCGTATTAAGTCCCTTTGTCCCTTTTTTCACGGTTCTCGTGCC
CCTTAGTAGAATCAAAaacataggccatttcacagttgCAAAGCGTAATG
GATAATCAGGACCATTGTGCGCTAAttacgacttactattggtgcaaagt
tttgaaaatctttgaagatttttgcgtctagcctaCGGAAAACCGTTATC
AGGGTGCAATCAGTCTTGATTACCAATGGTCTATTTCGAATGTTCGATAA
AGCCGACTGCTAGGAGCGAAATTTCTCCGTAGTGTTAGTCTGACACTGGA
TAGGAAGTGAAATTTACAGTCCTACTTTGAAAAATGTATCACTTAGAAAT
CAAATATTTCTCAATACGTAGACAAGGGGGCGCACGGAATTTCGGTCTTA
TAAAGTCTTTATCCCCTTTTtccggaattcatacatgaaaaatcaaattt
gatgaaaaattagtcaaaacaaggaaaaatacCTAAGAAattggtatcgg
aattgcaattatttttttacggaatttcggaaatttcggcaaaattattc
ggtatttatTATTAATTTCGAAACTTTCTTTCACATGAAATTTTGTGTTT
GTATAAGGCTATATATTTCACttccttttttgattttgtcgtCCAACAGA
ATGATGAGGGAGCAATCGATGGCTGTGAATTATACGCCCTTATTAAAGAT
GTTCTTGAATCGAACGGTCACGTGAGTATAACACAATTATCTGAATAGAT
GAGGAATATAGAAATAGATATTATTAtatcaaaaaaaagttattttacat
aaaaatgAATCCAACCAGTTTAACAAAACCTGACGAGTTGCTTTGATCTT
TTGAAACACAAAATCTAACACCCCAAGGTCAGCAAATAGCGCTTTTACAC
GTTGATCGTGAGTTAAATGACATTAGACATTACCATTTTGTTCAAGGGTT
TATAGGCACATCTCAACTTATCTCAACAAttccacttttttgaaaagtaa
atattttcgGTTGCACATCTttagactctatattcattAGCCGCCCACTT
TTAATTTCATGGCGTGGGTTCTGCAAAACTTGTTATTTTGCTTacagata
aacatttttttcccttTCTTATTAATAGAAAGATCCTTACAACATGGAAG
TGATTCTCGAAAAACAAGAATATTTGAAAGAAGCAGGATGCTTAACACCA
AGTGGTGCACTGGATTACACCAAAACTGACATTGTTTTCGCCCTGGGAAC
GGAGAAAGCCTCAGAAGAAGTCGTTTAA Coding sequence (CDS) from alignment at sc0000092_pilon:705805..710432+ >XLOC_034759 ID=XLOC_034759|Name=XLOC_034759|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1374bp|location=Sequence derived from alignment at sc0000092_pilon:705805..710432+ (Clytia hemisphaerica_ch_hm2_pilon)
TTCCAGGAAAACGAAGCTATTTATTTGACGAAGTTTATCAAAACCTTTGT
GACTTATTACACGCACTCAAAAGCTAGATGGGTTGACCTGGCTGATTTCC
AGGAAAACGAAGCTATTTATTTGACGAAGTTTATCAAAACCTTTGTGACT
TATTACACGCACTCAAAAGCTAGATGGGTTGACCTGGCTGATATGTTTCG
ATACTTGGAGCCGTTCCTTCTTCCACACGCTTTCTCGGATGTTCGTGGTC
GTCTCAAATACTCCTCTGTTGATGTGATGCAGATGTTTCGATACTTGGAG
CCGTTCCTTCTTCCACACGCTTTCTCGGATGTTCGTGGTCGTCTCAAATA
CTCCTCTGTTGATGTGATGCAGATTTGGACGTATTACAACGATGACCACA
CAGATACTATGGATGGAGACGAAATTATGATTTGGACGTATTACAACGAT
GACCACACAGATACTATGGATGGAGACGAAATTATGGTGTTTGTCTTTGA
CATGTTACAAAATCCGAAGCAGCGATGTAACCCAAAGATTATTGACAGTT
TGACTGCAAAACTTGTGTTTGTCTTTGACATGTTACAAAATCCGAAGCAG
CGATGTAACCCAAAGATTATTGACAGTTTGACTGCAAAACTTATTGAATT
GTCTGGTGAAGAAGAAGTGACACTCAGAGGATTTTCAAAATTGAATTGTC
TGGTGAAGAAGAAGTGACACTCAGAGGATTTTCAAAGTTGTTACCACTTG
AAGACAGCATCATGGACCAATACAAAGACATCACAAAATTGGATCGAAAA
GCGACTTTGCGTGTATTAGCCTTCTATGATCAGGTTGTTACCACTTGAAG
ACAGCATCATGGACCAATACAAAGACATCACAAAATTGGATCGAAAAGCG
ACTTTGCGTGTATTAGCCTTCTATGATCAGAATGATGAGGGAGCAATCGA
TGGCTGTGAATTATACGCCCTTATTAAAGATGTTCTTGAATCGAACGGTC
ACAATGATGAGGGAGCAATCGATGGCTGTGAATTATACGCCCTTATTAAA
GATGTTCTTGAATCGAACGGTCACAAAGATCCTTACAACATGGAAGTGAT
TCTCGAAAAACAAGAATATTTGAAAGAAGCAGGATGCTTAACACCAAGTG
GTGCACTGGATTACACCAAAACTGACATTGTTTTCGCCCTGGGAACGGAG
AAAGCCTCAGAAGAAGTCGTTTAAAAAGATCCTTACAACATGGAAGTGAT
TCTCGAAAAACAAGAATATTTGAAAGAAGCAGGATGCTTAACACCAAGTG
GTGCACTGGATTACACCAAAACTGACATTGTTTTCGCCCTGGGAACGGAG
AAAGCCTCAGAAGAAGTCGTTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000092_pilon | genome | sc0000092_pilon:705805..710432 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 538-687:4479 |
| Aaloc | 466-537:4000 |
| Aaloc | 370-465:3239 |
| Aaloc | 322-366:2814 |
| Aaloc | 244-321:1966 |
| Aaloc | 187-243:1452 |
| Aaloc | 97-186:806 |
| Aaloc | 1-96:1 |
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