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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000094_pilon:241861..243819- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034560 ID=XLOC_034560|Name=XLOC_034560|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1959bp|location=Sequence derived from alignment at sc0000094_pilon:241861..243819- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAAAGAAAGCATGACGATGATGAACACTCTACTGAAATGCATGG
GGATATCAATAAGTTGCTAGGAGAGCTTCAACCAGCCAAAAAGTTGCTCA
AGAATCTGTTAAAGAAAGGAAGACAATCAAAGGAAGATCTTCATGAGAGT
GTCACAAAGGAGAGTGAAGACGAAATAGAAACTGAAGGAGAAGAAGGGAG
CGAGGAAGATTTTGGGACAGCTTCTGAAAATGAAAGTGATCTTGAAATTG
AAGAAGAGGTTGTTGATTCTACTGATCCATTTAGTGTTCATTTTGAACAA
ACTCTGGAAGAAAATATTGTAGATGCTTTCAAATCAAATGCCAAAATGCA
AAAAGTCAAAACTTTCAAAAAAGCTGGCATGACTGTTGATGAATTCAGTT
TTGAAAATATGAAAGATATTTCAGAGCATATTGTAGAGTTTAACTCCCCT
CTTCTCAATTTTGGAATGGTTTCTGTAAAGGAGAAGTTGTCACAAAATTG
GAGTGTTGTCAACAAGGCTAAAAAGTCTAAAGAAAACCTTACTGGGCTTC
AAAGGGAACTTTTGAAACCTATATTTTCTTACCAAGATTTATGCTACACT
GGTCGTAATTTTCATAATGGAGAGGAAATTAGAAAGCTGTATTCGCTTCA
TGCTGTAAATCATGTTTTGAAAACACGTACTAAAATTCTTAAACATAATG
CTAAATTACAAAGTGCTGCTGAAGCTGGTATTGGAATAGAGGAGGAGCTC
CGTGACCAAGGAATCACCCGTCCGAAAGTGTTGATTGTTGTACCTTTCAA
AGATTCTTGCTTAAAGATTGTGAATGTTTTGAAGAAATTGCTGTTCGGGA
ATGAAAAGAAAGTGCAGATAATGAACAAGAAGAGGTTTCAGAAAGAATTT
TCTTCAGATGAGGCAAGCCATCAAGGATACCGCCCTGAAGATTTTAAGCT
GATGTTTGAGGGTAACATAGATGATGGCTTTCGTATTGGTATTTCCCTTT
CTAAAAACACTATGAAACTTTACACTCATTTTTATTCATCTGATATTATT
ATTGCATCACCTCTTGGTTTGCGCACATTGATTGGAGGGAAAGGAGAAAA
GCAAGATTTTGATTTTCTTTCATCAATCGAGTTGCTAATTATAGATCAAG
CTGAAGTCTTCTTAATGCAAAATTGGGATCATCTTATCACTGTATTAGAT
CACATTAACAGAAGACCCAAGAGTACTCACGATACAGATATCTCCCGTGT
CCGAATGTGGTCAATCAATGAATGGTCCAGATATTATCGACAAAACCTCA
TCTTCTCATCCTTCCCCACACCAGAAATCAACAGTATCTTCAATAGATAT
TTTCAAAATTTTGCTGGGAAAACAAAATGGGTCGTTACAGACAGTCCAGG
AACTGTGCAGCATGTTGTTTCAGAGATCCCACAAGTATTCCGTCGTATCA
ATGTTGATGATTATGCTTCTCTTCCTGATAAGAGATTCGAGTTCTTTGTG
GATCAAATGCTTCCTGATTTAGTAAAAAATCAAAAATCCATCGCCATCTA
CATCCCATCTTATTTTGATTTTGTTCGCGTTCGAAATTACATGAAGAAAG
AAGAGATAGGCTTTGTTCAAATATCTGAGTATACAAAGAAAAGCTACTCC
TCACACGCAAGGACCTTGTTTAGAGAGGGACGAAAGCAGTTTCTCATCTT
CACTGGTCGATTTTTCTTTTATTATCGTTACCGTATCACTGGTATCAGGA
ATCTTGTGTTTTATGATATCCCTCTATATCCCCAGTTTTATCCTGAAGTT
GTGAACTTTATCAAAACAGATGATAAGGAGGGTTCACCATCTTGCACTGC
CTTATTCAGTAGGTATGATGCTCTGAAATTACAAGGTGTCGTTGGCACTG
AGCGTATGAAGAAAATGATGTCTGGAAAAGCTGTTCATATGATTGTAACA
GGCAAATAA Coding sequence (CDS) from alignment at sc0000094_pilon:241861..243819- >XLOC_034560 ID=XLOC_034560|Name=XLOC_034560|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3918bp|location=Sequence derived from alignment at sc0000094_pilon:241861..243819- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATGAAAAGAAAGCATGACGATGATGAACACTCTACTGAAATGCATGG
GGATATCAATAAGTTGCTAGGAGAGCTTCAACCAGCCAAAAAGTTGCTCA
AGAATCTGTTAAAGAAAGGAAGACAATCAAAGGAAGATCTTCATGAGAGT
GTCACAAAGGAGAGTGAAGACGAAATAGAAACTGAAGGAGAAGAAGGGAG
CGAGGAAGATTTTGGGACAGCTTCTGAAAATGAAAGTGATCTTGAAATTG
AAGAAGAGGTTGTTGATTCTACTGATCCATTTAGTGTTCATTTTGAACAA
ACTCTGGAAGAAAATATTGTAGATGCTTTCAAATCAAATGCCAAAATGCA
AAAAGTCAAAACTTTCAAAAAAGCTGGCATGACTGTTGATGAATTCAGTT
TTGAAAATATGAAAGATATTTCAGAGCATATTGTAGAGTTTAACTCCCCT
CTTCTCAATTTTGGAATGGTTTCTGTAAAGGAGAAGTTGTCACAAAATTG
GAGTGTTGTCAACAAGGCTAAAAAGTCTAAAGAAAACCTTACTGGGCTTC
AAAGGGAACTTTTGAAACCTATATTTTCTTACCAAGATTTATGCTACACT
GGTCGTAATTTTCATAATGGAGAGGAAATTAGAAAGCTGTATTCGCTTCA
TGCTGTAAATCATGTTTTGAAAACACGTACTAAAATTCTTAAACATAATG
CTAAATTACAAAGTGCTGCTGAAGCTGGTATTGGAATAGAGGAGGAGCTC
CGTGACCAAGGAATCACCCGTCCGAAAGTGTTGATTGTTGTACCTTTCAA
AGATTCTTGCTTAAAGATTGTGAATGTTTTGAAGAAATTGCTGTTCGGGA
ATGAAAAGAAAGTGCAGATAATGAACAAGAAGAGGTTTCAGAAAGAATTT
TCTTCAGATGAGGCAAGCCATCAAGGATACCGCCCTGAAGATTTTAAGCT
GATGTTTGAGGGTAACATAGATGATGGCTTTCGTATTGGTATTTCCCTTT
CTAAAAACACTATGAAACTTTACACTCATTTTTATTCATCTGATATTATT
ATTGCATCACCTCTTGGTTTGCGCACATTGATTGGAGGGAAAGGAGAAAA
GCAAGATTTTGATTTTCTTTCATCAATCGAGTTGCTAATTATAGATCAAG
CTGAAGTCTTCTTAATGCAAAATTGGGATCATCTTATCACTGTATTAGAT
CACATTAACAGAAGACCCAAGAGTACTCACGATACAGATATCTCCCGTGT
CCGAATGTGGTCAATCAATGAATGGTCCAGATATTATCGACAAAACCTCA
TCTTCTCATCCTTCCCCACACCAGAAATCAACAGTATCTTCAATAGATAT
TTTCAAAATTTTGCTGGGAAAACAAAATGGGTCGTTACAGACAGTCCAGG
AACTGTGCAGCATGTTGTTTCAGAGATCCCACAAGTATTCCGTCGTATCA
ATGTTGATGATTATGCTTCTCTTCCTGATAAGAGATTCGAGTTCTTTGTG
GATCAAATGCTTCCTGATTTAGTAAAAAATCAAAAATCCATCGCCATCTA
CATCCCATCTTATTTTGATTTTGTTCGCGTTCGAAATTACATGAAGAAAG
AAGAGATAGGCTTTGTTCAAATATCTGAGTATACAAAGAAAAGCTACTCC
TCACACGCAAGGACCTTGTTTAGAGAGGGACGAAAGCAGTTTCTCATCTT
CACTGGTCGATTTTTCTTTTATTATCGTTACCGTATCACTGGTATCAGGA
ATCTTGTGTTTTATGATATCCCTCTATATCCCCAGTTTTATCCTGAAGTT
GTGAACTTTATCAAAACAGATGATAAGGAGGGTTCACCATCTTGCACTGC
CTTATTCAGTAGGTATGATGCTCTGAAATTACAAGGTGTCGTTGGCACTG
AGCGTATGAAGAAAATGATGTCTGGAAAAGCTGTTCATATGATTGTAACA
GGCAAATAAATGATGAAAAGAAAGCATGACGATGATGAACACTCTACTGA
AATGCATGGGGATATCAATAAGTTGCTAGGAGAGCTTCAACCAGCCAAAA
AGTTGCTCAAGAATCTGTTAAAGAAAGGAAGACAATCAAAGGAAGATCTT
CATGAGAGTGTCACAAAGGAGAGTGAAGACGAAATAGAAACTGAAGGAGA
AGAAGGGAGCGAGGAAGATTTTGGGACAGCTTCTGAAAATGAAAGTGATC
TTGAAATTGAAGAAGAGGTTGTTGATTCTACTGATCCATTTAGTGTTCAT
TTTGAACAAACTCTGGAAGAAAATATTGTAGATGCTTTCAAATCAAATGC
CAAAATGCAAAAAGTCAAAACTTTCAAAAAAGCTGGCATGACTGTTGATG
AATTCAGTTTTGAAAATATGAAAGATATTTCAGAGCATATTGTAGAGTTT
AACTCCCCTCTTCTCAATTTTGGAATGGTTTCTGTAAAGGAGAAGTTGTC
ACAAAATTGGAGTGTTGTCAACAAGGCTAAAAAGTCTAAAGAAAACCTTA
CTGGGCTTCAAAGGGAACTTTTGAAACCTATATTTTCTTACCAAGATTTA
TGCTACACTGGTCGTAATTTTCATAATGGAGAGGAAATTAGAAAGCTGTA
TTCGCTTCATGCTGTAAATCATGTTTTGAAAACACGTACTAAAATTCTTA
AACATAATGCTAAATTACAAAGTGCTGCTGAAGCTGGTATTGGAATAGAG
GAGGAGCTCCGTGACCAAGGAATCACCCGTCCGAAAGTGTTGATTGTTGT
ACCTTTCAAAGATTCTTGCTTAAAGATTGTGAATGTTTTGAAGAAATTGC
TGTTCGGGAATGAAAAGAAAGTGCAGATAATGAACAAGAAGAGGTTTCAG
AAAGAATTTTCTTCAGATGAGGCAAGCCATCAAGGATACCGCCCTGAAGA
TTTTAAGCTGATGTTTGAGGGTAACATAGATGATGGCTTTCGTATTGGTA
TTTCCCTTTCTAAAAACACTATGAAACTTTACACTCATTTTTATTCATCT
GATATTATTATTGCATCACCTCTTGGTTTGCGCACATTGATTGGAGGGAA
AGGAGAAAAGCAAGATTTTGATTTTCTTTCATCAATCGAGTTGCTAATTA
TAGATCAAGCTGAAGTCTTCTTAATGCAAAATTGGGATCATCTTATCACT
GTATTAGATCACATTAACAGAAGACCCAAGAGTACTCACGATACAGATAT
CTCCCGTGTCCGAATGTGGTCAATCAATGAATGGTCCAGATATTATCGAC
AAAACCTCATCTTCTCATCCTTCCCCACACCAGAAATCAACAGTATCTTC
AATAGATATTTTCAAAATTTTGCTGGGAAAACAAAATGGGTCGTTACAGA
CAGTCCAGGAACTGTGCAGCATGTTGTTTCAGAGATCCCACAAGTATTCC
GTCGTATCAATGTTGATGATTATGCTTCTCTTCCTGATAAGAGATTCGAG
TTCTTTGTGGATCAAATGCTTCCTGATTTAGTAAAAAATCAAAAATCCAT
CGCCATCTACATCCCATCTTATTTTGATTTTGTTCGCGTTCGAAATTACA
TGAAGAAAGAAGAGATAGGCTTTGTTCAAATATCTGAGTATACAAAGAAA
AGCTACTCCTCACACGCAAGGACCTTGTTTAGAGAGGGACGAAAGCAGTT
TCTCATCTTCACTGGTCGATTTTTCTTTTATTATCGTTACCGTATCACTG
GTATCAGGAATCTTGTGTTTTATGATATCCCTCTATATCCCCAGTTTTAT
CCTGAAGTTGTGAACTTTATCAAAACAGATGATAAGGAGGGTTCACCATC
TTGCACTGCCTTATTCAGTAGGTATGATGCTCTGAAATTACAAGGTGTCG
TTGGCACTGAGCGTATGAAGAAAATGATGTCTGGAAAAGCTGTTCATATG
ATTGTAACAGGCAAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000094_pilon | genome | sc0000094_pilon:241861..243819 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1959:1960 |
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