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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000103_pilon:665797..668915- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034228 ID=XLOC_034228|Name=XLOC_034228|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3119bp|location=Sequence derived from alignment at sc0000103_pilon:665797..668915- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCAAAACCTAGATGATTCAAAAAGTCTCGCTCATCCACACGAGCC
AGCAAGATGGTGGTTCCAGATTTCCATACCATTTGAAGTATGTCTTAAAT
CAACTCTCCTGGACACACTTTACAATCCGCAATTTGGTGATTTCCCAAAA
TCATGTAAAGCTGTTGAGTTGAATGAAATTCTTGTTGGCATTCAAGAGAA
AGTGACGCATTCTTTCAACCATCAATCAGACATCCTTGCCAAAAATGTAG
AGCCGAGTTCGCTGGTCGATACTAAACCAATCATTGCGAGATTAGATGTC
ATGGCTATATCACTTCTCATCTTGGAGAAATCAAAGTTAAAACCTAAGCT
ACTTTCAATTGTTAAAGAGTCAAAGGACGATTCAATTATTGACCAATATC
TTAACATGACCAGCTCAATAATGGCTGTGTTGGGTCTCAAAGCAAGAATT
TTGTCAGCATCTCTGACTCTTCATGAAGACGAATTCCTTACGTATAAAAA
AATGTTGGTCGATATTTTACGAAGGCTCTCATACGGTGATTTTGAGTATT
TTAACTCTTTATTCAATGATGATGGTGAAGATCTAACATCTTTTGATGGA
TTGAAACTTGAATTATTAGAAGAGAAACAAAAACATCTGAGGAACTTGAA
AATGCATGATCAAGGTTACTTTTTGTTTACAACTTTTCCAAATTCGAGCG
AAAGCCTGGATGCTATCACTAGACAATCACTTGAAGTCGAAAAAATATTA
GAGAGTGTGAAGGAAGCTTTAAAACGTAAAGTGCTAACAAAAATGGAAGA
TGACATAACCGATCAATCATCCAATGAAAATCGTCAACTTCCAATCCAAC
AGCAGGACAGCCATACTAAAGACAAGTGTCAAACTGATCAATCTTCGAAC
CCGAACCAAAAAATTCCAATCCAAGTTAAAGACAAGCGTCAAACTGATCA
ATCTTCGAACCAAAATCACAAACTTCCAATCCAACAGCAGGACAGCCAAG
TTAAGGACAAACGTCAAACTGATCAATCTTCGAACCAGAACCACAAACTT
CCAATCCAACAGCAGGGCAGCTATACTAAGGACAAACGTCAAACTGATCA
ATCTTCGAACCAAAATCACAAACTTTCAATTCAACAGCAGGACAGCCATA
TTAAAGACAAAGATCAAACTGATCAATCTTCGAACCAGAGCCACAAACTT
CCAATCCAACAGCAGGACAGCTATACTAAAGACAAAGATCAAACTGATCA
ATCTCCGAACCAGAACCACAAACTTCCAATTCAACAGCAAGACAGCCATA
CTAAAGACACAGATCAAACTGATCAATCTTCGAACCAGAACCACAAACTT
CCAATCCAACAGCAGGACAGCCATACTAAAGACACAGATCAAACTGATCA
ATCTTCGAACCAGAGCCACAAACTTTCAATTCAACAGCAGGACAGCCATA
CTAAAGACAAAGATCAAACTGATCAATCTTCGAACCAGAACCACAAACTT
CCAATTCAACAGCAGGACAGCCATACTAAAGACACAGATCAAACTGATCA
ATCTTCGAACCAGGACCACAAACCTCCAATCCAACAGCAGAGCAGCCATA
CTAAAGACAAAGATCAAACTGATCAATCTTCGAATCAAAACCACAAACTT
CCGATTCAAAAGCAGCCACCAAATACAGCCACCAAATCTCCGATGCTCTC
GCCACATCAAAATAAATTTGGTAAAATAATTTACGAATCATTGTTTTTTA
GTACTCGTACACCCCTGTCTCACAGCCCAGATGGCACTTTTTTCTTCAGT
GGTGGATAAAAACCCCTATTAAAATCCCAATAGGGATAGGAATTTTATTG
TTCCAAGGGGATCAGTGGGGATGGTTTTGGAGTGCCATTTTTAGACATTG
ATTTTCGAGTGGGGATGAAATCAAAGTCAATTTTCCAGTGGGACTAAAAT
TTCAGGGTATTTCCCACCGGGGACCAAATTTTTGCCATATTTTCCAGTGG
GTATGGGGTCCCAGTGGGTCTGTGACACAGGGGTGTACTCGTGTGACATG
ATAAGATAAGATACAATAGAACAAAATTCTTCACTTCCTCTCATTTAGCT
AATGTATTAAACATTTCTTATTTAGTTCATTTATTGCCACTTAGCTTTTG
TTTTTTCATTTGATGATAAGACCATAGTATAAGAAAGCCGCGGCTGGAAT
GATAACATCTGAATTTCTGTTATTCTATCTCTGTCGTATTTGATGACTAT
TTGTTGATCAAGAAATCAGTAATGTAGCATCTTTAATGGTAAATTTTATT
GGTTTGTCGTTAATAATTACTTCTCAGTGCGTTTTAGACATTAATGATAT
GCTCTCGATAATACACTTGCATTATAAAATCATTGTAACGGAAAAATCAA
CACTAAGAAATTGAAACAAGCACAAAATGGCTGGGCTGAAAGAACTCAAA
AATTAACGAGGTGTCTCGAAATGCCTTCGCAATATTTCAGTGAAATCTCT
TTAGAAATCAATGAAAAACTACATCAAGATAACACTGTGAAAATTTCAAG
CCAGCACCTTCAAAATTTATCATTTAAACTGACAGGAAAGTTGTCATCTT
GAATATAGTTCTTATAATTTCAATTTTAGCGGAAAACTATTTTTCCACAA
AATACCCCTAAAATACGTCCAAAATTAGTTCAAGTGTTCTATTGGGTACA
GATTCAAAGATATCTAGCAACAAAAAAACTTTTTGTGAAGGAAAATAAGA
GAAAAATTTCAAAAACTATCTACCAATAACAAACTGATCATCTTGATGTT
CTTATAAAGCTCGGAGACAGAGATGGAACAGCAATTAACTGAAAAGACAA
TGCGGTACATATTCCAGCCACGGCTTTCTTATACCATGATAAGACATCGG
TTTGAGTCTCAGGTTCCTTCTACTTTTTCTTCAATTTGTTAACTTTCTCC
ATTTTTTCATTTAGATATCTCAAAGAAAAGCCAGCAATTGAAAAGAGAGA
CGAAGGAAAGATATAACACCATAGACACGCCCTACCATAGTGGCGTTTCC
AATCTTCACGCCCCTATCTCATCCAAACGTGATGAAATCATTGTCGACTT
ATCCATAATTTCATCTGAT Coding sequence (CDS) from alignment at sc0000103_pilon:665797..668915- >XLOC_034228 ID=XLOC_034228|Name=XLOC_034228|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2700bp|location=Sequence derived from alignment at sc0000103_pilon:665797..668915- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATCAAAACCTAGATGATTCAAAAAGTCTCGCTCATCCACACGAGCC
AGCAAGATGGTGGTTCCAGATTTCCATACCATTTGAAGTATGTCTTAAAT
CAACTCTCCTGGACACACTTTACAATCCGCAATTTGGTGATTTCCCAAAA
TCATGTAAAGCTGTTGAGTTGAATGAAATTCTTGTTGGCATTCAAGAGAA
AGTGACGCATTCTTTCAACCATCAATCAGACATCCTTGCCAAAAATGTAG
AGCCGAGTTCGCTGGTCGATACTAAACCAATCATTGCGAGATTAGATGTC
ATGGCTATATCACTTCTCATCTTGGAGAAATCAAAGTTAAAACCTAAGCT
ACTTTCAATTGTTAAAGAGTCAAAGGACGATTCAATTATTGACCAATATC
TTAACATGACCAGCTCAATAATGGCTGTGTTGGGTCTCAAAGCAAGAATT
TTGTCAGCATCTCTGACTCTTCATGAAGACGAATTCCTTACGTATAAAAA
AATGTTGGTCGATATTTTACGAAGGCTCTCATACGGTGATTTTGAGTATT
TTAACTCTTTATTCAATGATGATGGTGAAGATCTAACATCTTTTGATGGA
TTGAAACTTGAATTATTAGAAGAGAAACAAAAACATCTGAGGAACTTGAA
AATGCATGATCAAGGTTACTTTTTGTTTACAACTTTTCCAAATTCGAGCG
AAAGCCTGGATGCTATCACTAGACAATCACTTGAAGTCGAAAAAATATTA
GAGAGTGTGAAGGAAGCTTTAAAACGTAAAGTGCTAACAAAAATGGAAGA
TGACATAACCGATCAATCATCCAATGAAAATCGTCAACTTCCAATCCAAC
AGCAGGACAGCCATACTAAAGACAAGTGTCAAACTGATCAATCTTCGAAC
CCGAACCAAAAAATTCCAATCCAAGTTAAAGACAAGCGTCAAACTGATCA
ATCTTCGAACCAAAATCACAAACTTCCAATCCAACAGCAGATGGATCAAA
ACCTAGATGATTCAAAAAGTCTCGCTCATCCACACGAGCCAGCAAGATGG
TGGTTCCAGATTTCCATACCATTTGAAGTATGTCTTAAATCAACTCTCCT
GGACACACTTTACAATCCGCAATTTGGTGATTTCCCAAAATCATGTAAAG
CTGTTGAGTTGAATGAAATTCTTGTTGGCATTCAAGAGAAAGTGACGCAT
TCTTTCAACCATCAATCAGACATCCTTGCCAAAAATGTAGAGCCGAGTTC
GCTGGTCGATACTAAACCAATCATTGCGAGATTAGATGTCATGGCTATAT
CACTTCTCATCTTGGAGAAATCAAAGTTAAAACCTAAGCTACTTTCAATT
GTTAAAGAGTCAAAGGACGATTCAATTATTGACCAATATCTTAACATGAC
CAGCTCAATAATGGCTGTGTTGGGTCTCAAAGCAAGAATTTTGTCAGCAT
CTCTGACTCTTCATGAAGACGAATTCCTTACGTATAAAAAAATGTTGGTC
GATATTTTACGAAGGCTCTCATACGGTGATTTTGAGTATTTTAACTCTTT
ATTCAATGATGATGGTGAAGATCTAACATCTTTTGATGGATTGAAACTTG
AATTATTAGAAGAGAAACAAAAACATCTGAGGAACTTGAAAATGCATGAT
CAAGGTTACTTTTTGTTTACAACTTTTCCAAATTCGAGCGAAAGCCTGGA
TGCTATCACTAGACAATCACTTGAAGTCGAAAAAATATTAGAGAGTGTGA
AGGAAGCTTTAAAACGTAAAGTGCTAACAAAAATGGAAGATGACATAACC
GATCAATCATCCAATGAAAATCGTCAACTTCCAATCCAACAGCAGGACAG
CCATACTAAAGACAAGTGTCAAACTGATCAATCTTCGAACCCGAACCAAA
AAATTCCAATCCAAGTTAAAGACAAGCGTCAAACTGATCAATCTTCGAAC
CAAAATCACAAACTTCCAATCCAACAGCAGGACAGCCATACTAAAGACAC
AGATCAAACTGATCAATCTTCGAACCAGGACCACAAACCTCCAATCCAAC
AGCAGAGCAGCCATACTAAAGACAAAGATCAAACTGATCAATCTTCGAAT
CAAAACCACAAACTTCCGATTCAAAAGCAGCCACCAAATACAGCCACCAA
ATCTCCGATGCTCTCGCCACATCAAAATAAATTTGGACAGCCATACTAAA
GACACAGATCAAACTGATCAATCTTCGAACCAGGACCACAAACCTCCAAT
CCAACAGCAGAGCAGCCATACTAAAGACAAAGATCAAACTGATCAATCTT
CGAATCAAAACCACAAACTTCCGATTCAAAAGCAGCCACCAAATACAGCC
ACCAAATCTCCGATGCTCTCGCCACATCAAAATAAATTTGATATCTCAAA
GAAAAGCCAGCAATTGAAAAGAGAGACGAAGGAAAGATATAACACCATAG
ACACGCCCTACCATAGTGGCGTTTCCAATCTTCACGCCCCTATCTCATCC
AAACGTGATGAAATCATTGTCGACTTATCCATAATTTCATCTGATATATC
TCAAAGAAAAGCCAGCAATTGAAAAGAGAGACGAAGGAAAGATATAACAC
CATAGACACGCCCTACCATAGTGGCGTTTCCAATCTTCACGCCCCTATCT
CATCCAAACGTGATGAAATCATTGTCGACTTATCCATAATTTCATCTGAT
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103_pilon | genome | sc0000103_pilon:665797..668915 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1198-1350:154 |
| Aaloc | 991-1194:1605 |
| Aaloc | 1-990:3120 |
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