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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000103_pilon:673136..677534- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034227 ID=XLOC_034227|Name=XLOC_034227|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4399bp|location=Sequence derived from alignment at sc0000103_pilon:673136..677534- (Clytia hemisphaerica_ch_hm2_pilon)
AATAGAACATTCTTAACACCAATGTTATCCAAACACGGTAAACTATGGTC
CAACTTTTGGGGAGCTATTGGATCAGATGGTTTCTATGCTCGATCACCAG
ACTATATCGATATTGTGAAGAACATTCGTCGTGGAGTGTGGAACGTACCA
CACGTTGCCAGTGCTTATTTGATCAAAGCATCAGCAATCAAACAAATGGT
TGTCAATCCGTTCTATTCGGAGAGACGAGACCAAGATATGATTTTTGGTG
AAAACAATAGAGATAGAGTAAGATCTTTTGTTACTGGTGGTACCCTTCTT
AAGGCTTGCGGTACCCTTCTTAAGACTTTTTTCGCGTTGGTGCAATGCAA
CATACTCCATCCCACCAACACAAGATAATTGCGTCTCCCATGTTTTTTTG
TTTGTTTCGTGAGACAAAAAGTGAGGGTTTTATTGGTAGAAAGGAAAATG
GGGTTTCAGGCGTTTTAGGTCGGTGGGATGTTGCATTGCACGAATGAAAG
AATGAATCTCCCTCCCCTCACTTTTTAAAAACCAATATTACACCAAGCTT
CATTTTAAGTACAAGTTTTTTTATATGAACATATAAAACTTTTGAAACCT
TTGATGTTCTTAACTTTTTGAGTTTTAAGCCTAAAAGAGTTCTTATTTTC
GCCTTTTTTGAGTATTTATGTGTATTTTCCTAAGGAATAGGGCCTTTTGG
GGTCCACAAAGTCTTAAAATGTTTTTAAGTTGTTCTTAATATTTTGGCTA
TCGAAGCCTTATGTTCTTATATAGTTTGTTCTTATTAAAAAAAAACGTGT
ATGCATGATTTCACATGACTTTTCTTTGATTTTTTCTTTTAAAAAGTAAA
ATATGGGCATCAATTTGATAAAATGAATCTCTCTCTCCTCACTTTTCAAA
AATCACTTGAGTATTACACCAAGCTTGATTTTCATTGGTAGGGTGTGTTT
ATGTATGTGACCAACATGGAACATTTTGGACATTTGAAAGAAACAGAGAC
GTACACAACAAACTACAAACACAACGACCTCCACCAATTGTTCAGTAATA
GACTGGTGAGTACAACCAAACTTTCATGTCAGATTGCATTTTGCGTGGAT
AGACTTTTCGTTCCAAAGTTTGGCTATATTTGTGAAATCCGTACTTGTGA
AATATTTTTGTCTCTGGTAGGAATACGAAGGAAATTAGGTAAACAAAAAA
GCTGTCGAAAAATTCTTTCCACACTTTCCAAACTTTTGATAATAGATTCC
CAAATATTTTCCGATAAGTATATCTAGACGCGATGAAAATATACACCGCG
AAAATTTACGCACATAACTGCAATATAATTTTTTTTTTTAGTTCTTTTTA
GTCGTTCGGTAAGATAAACTCTTCTTTCGGTTTTCATAGGATTGGGAGGA
ACGTTATCTACATCCAAATTACACAAACTACTTGAAACCCAATTCTGACA
TGCCTATGGTAGGTTGCTTCTTTTTAATCTAATGAACAGTTTATCTTGAT
AGTGTCTTGTCTAAAGATAGCCAAAAGGCAAACGTCTAAAAACCCAACTT
GACAAAAAGAAATGCTTCCTACGGCACTGAAAACGCACAAAAATTCGGAA
TTCCAGAGGGTTTTGACCCTTGAGTTTCTTGGAATTCCAGGGGTAGCTCA
TACAAAGGTTGGACCTCCTTAACAGGGGGTGTACGGTTTTTTTCTGGAAA
AGCCCATTGATCTTTTCCTTTTTTTCCTATTTTTTTCAGCCTTGTCCAGA
TGTGTATTGGTTTCCACTTGTTACTGCAAACTACACCGAAGATCTGATTG
AGGTAAATATTTATGCCGAAAAGGCTTGACTTCCTCCTCCCTAGAAGTCA
ATCGTGATTCTGGTAGAATTGTTTTATAATTATCATATACCTTCTCGACC
CTTTTTACACCGGCCCTTATTATTGGCGCTATTTTTGGGCTCTTGGCGTA
ATAAGGGCCGGCGTAAAAAGGTCTTTGAAACTTTTATTAACTACAAGTAA
CTAACTATATCAATGGTTACAATACTTGATTTTTGTCTGCAGATTTATTT
CAGATACATATACCTTCGATGTTTGATTTTTTGGACCTACCCCGGTGGGG
TGGAGGTCCTATAAATTAACCTGTGTTCGTTCGTTCGTCCGTCCGTCCGT
TCGTTCGTCTGTTACCAACTTTTCTCAGGATTGAATCATAGGAATCTTTT
GATTTTTGGTACAAAGGTGCAAAATGATGGTGGCCAAAATGTTACGGAGC
CCGATTTTCGAGAAGAAAAAAATTTTGGGGAAATTTGGGCCAGCAAACGG
CTAAAAAACGGTTTTTTTGGACTTTTTTTTTTATTTTTTGCATTTCTTAA
ACAGATTTTTGCAAAAAAAAATTATTGGCTCAAAAAACGCATCTTTATCT
ATAAGAATCACTATTTATAAGCATAAATCAATGTTCTTAGCCAAATTATT
ATTTTATTATTATTTTTTCTAAACAAAGAAAATTGAAATTGATTAGTTTG
ATAACCAAGTAGGTCCATAAAAGTATCACTTGTTATTTGATAGGAATGTG
AACATTTTGGTGGATGGTCCGGTGGAAGACATGAGGTAAATAAAATTATT
ATCAGCTGCTAAGATTTGTGGAAACTAATGAATTCCAACATCTGTAGTAG
AAATCATGATTAGCCTTCTTTCTGAATGTTCCGACATCTATGAGATACAT
ACTTAATGGTTTTAAGATATTTGATTTTTAAATCATGTTGCGTTTTTTCT
TTTTGGCCCATCTGGTATAACTTCTCATTGAAAATAATTTCTTGTGAGCC
AACCTTTTTGCAGAGTGTATTTTTGCCAATAGATTTTCTCAATTTATTCT
CAATGTATTCTTCCTTTTAGGATAAACGTATTTCTGGAGGATATGAAAAT
GTTCCCACCGTTGATATCCACATGAACCAGGTATAAGGTCTTATTTGATA
TTCTTTCTTTACATTTAGAGTAAAGAAATGTTATATTCCTTTCGAGAATC
GAGAATCGTCTTTAGACAATCAGGATCTAGACAAATAAAAAACTGACCGT
CTTAGCTGAAAAATATATAACATACTTAAATTCGCTTATGTTTTAGCTCA
ATATTGTCCCCATGTATCCCCAGGCTTTATTTACGCATGATTTGCGTTAC
TCATGGACGCCAGAGAATATTAAATTATCTGGCGCTATAGAAAAGCTGAT
AATACGCAGGGAACGAAATTGCTTTCAAGTCCAGTATGTATAGCAGTCCA
GTATACTACATGACAGATGACAGTAGTTAATACTGCCTGAAAATGCGATC
CAGGTTTTATTTCAGGGATTAAATTTTCTCGTTTTTTTTTCTCCATTCAG
ATTGGTTTTGAGAAACAATGGCTACAAATTTTAAAAGATTACGTCGCGCC
AATGTGTACTCGAATTTATACAGGTTACAATCCACATGTGAGTCGAATTT
CTTGTGTGATGATACTTGAAATTCCATTGATGGCTTGATGTATTACTCTT
TAGTCTATATATTCTACTGGGATACAAGCGACACTAAGAGGGAATGAATT
TCGAATATGCTGACGATATATCTATACGTCTTATTTGTTACTCTTTAGGG
AGAAAATTTTTTATTTTCATTTGAGAACCCTTTAATTAATACATTTTTTG
GTCCTTTTGGTTGTGTCCTATTCAAAAGGGACCTTACGTGAAAGTCTGCT
AGAAATGGACTTATCCCAAAATTTTACATTCAAGAATAAAATTAAATAGG
GAATCCATTTTTTTTTCTTAGTCGCATGCTATTATGAATTTTGTTGTCAA
ATACACACCGACTGGTCAGAAATATTTGCGACCACATCACGATGCTTCCA
CTTTCACCATCAATATGGCTTTGAATAGAAGAGGAATTGATTATGAGGTG
AGTCTTCAGTTTTTCTTTGACTCTTCTTTCTACGTTGTATGACCGGATAT
TGCCCGATAGATCAGTCGGTAGAGCTTTTACCATATAATTCAAGTTGTGG
GTTTCTATCCCTGGTCGTCACTAAGCTCTAGTTTAGACGGTGTTACGTCA
ATTCTAACCAATAGAATGGCTTCACTTCGTTTCGGAGCGAAACGGAGCCG
TCACGTGCGAATATGTTCTAAACTAGAGCTAACTCATCAGATTTGATTGC
ATTAATGTTTAAACTACGTTAGGAGACAGCTTGAAACGCCTTTCTTGATT
CACAATATCATACCTTCGCTAATCTTGATTCTTTCTTTTGTAGGGTGGAG
GTGCTCGTTTCCTCCGTTATAACTGCAGTGTCCGTGATACTCAAGTTGGA
TGGGCGTTGATCCACCCAGGGCGTTTGACACATCAACACGAAGGATTGGA
AACTACAAAAGGAACACGTTACATCATGGTCTCTTTCATTGATCCATAA Coding sequence (CDS) from alignment at sc0000103_pilon:673136..677534- >XLOC_034227 ID=XLOC_034227|Name=XLOC_034227|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1968bp|location=Sequence derived from alignment at sc0000103_pilon:673136..677534- (Clytia hemisphaerica_ch_hm2_pilon)
AATAGAACATTCTTAACACCAATGTTATCCAAACACGGTAAACTATGGTC
CAACTTTTGGGGAGCTATTGGATCAGATGGTTTCTATGCTCGATCACCAG
ACTATATCGATATTGTGAAGAACATTCGTCGTGGAGTGTGGAACGTACCA
CACGTTGCCAGTGCTTATTTGATCAAAGCATCAGCAATCAAACAAATGGT
TGTCAATCCGTTCTATTCGGAGAGACGAGACCAAGATATGATTTTTGGTG
AAAACAATAGAGATAGAAATAGAACATTCTTAACACCAATGTTATCCAAA
CACGGTAAACTATGGTCCAACTTTTGGGGAGCTATTGGATCAGATGGTTT
CTATGCTCGATCACCAGACTATATCGATATTGTGAAGAACATTCGTCGTG
GAGTGTGGAACGTACCACACGTTGCCAGTGCTTATTTGATCAAAGCATCA
GCAATCAAACAAATGGTTGTCAATCCGTTCTATTCGGAGAGACGAGACCA
AGATATGATTTTTGGTGAAAACAATAGAGATAGAGGTGTGTTTATGTATG
TGACCAACATGGAACATTTTGGACATTTGAAAGAAACAGAGACGTACACA
ACAAACTACAAACACAACGACCTCCACCAATTGTTCAGTAATAGACTGGG
TGTGTTTATGTATGTGACCAACATGGAACATTTTGGACATTTGAAAGAAA
CAGAGACGTACACAACAAACTACAAACACAACGACCTCCACCAATTGTTC
AGTAATAGACTGGATTGGGAGGAACGTTATCTACATCCAAATTACACAAA
CTACTTGAAACCCAATTCTGACATGCCTATGGATTGGGAGGAACGTTATC
TACATCCAAATTACACAAACTACTTGAAACCCAATTCTGACATGCCTATG
CCTTGTCCAGATGTGTATTGGTTTCCACTTGTTACTGCAAACTACACCGA
AGATCTGATTGAGCCTTGTCCAGATGTGTATTGGTTTCCACTTGTTACTG
CAAACTACACCGAAGATCTGATTGAGGAATGTGAACATTTTGGTGGATGG
TCCGGTGGAAGACATGAGGAATGTGAACATTTTGGTGGATGGTCCGGTGG
AAGACATGAGGATAAACGTATTTCTGGAGGATATGAAAATGTTCCCACCG
TTGATATCCACATGAACCAGGATAAACGTATTTCTGGAGGATATGAAAAT
GTTCCCACCGTTGATATCCACATGAACCAGATTGGTTTTGAGAAACAATG
GCTACAAATTTTAAAAGATTACGTCGCGCCAATGTGTACTCGAATTTATA
CAGGTTACAATCCACATATTGGTTTTGAGAAACAATGGCTACAAATTTTA
AAAGATTACGTCGCGCCAATGTGTACTCGAATTTATACAGGTTACAATCC
ACATTCGCATGCTATTATGAATTTTGTTGTCAAATACACACCGACTGGTC
AGAAATATTTGCGACCACATCACGATGCTTCCACTTTCACCATCAATATG
GCTTTGAATAGAAGAGGAATTGATTATGAGTCGCATGCTATTATGAATTT
TGTTGTCAAATACACACCGACTGGTCAGAAATATTTGCGACCACATCACG
ATGCTTCCACTTTCACCATCAATATGGCTTTGAATAGAAGAGGAATTGAT
TATGAGGGTGGAGGTGCTCGTTTCCTCCGTTATAACTGCAGTGTCCGTGA
TACTCAAGTTGGATGGGCGTTGATCCACCCAGGGCGTTTGACACATCAAC
ACGAAGGATTGGAAACTACAAAAGGAACACGTTACATCATGGTCTCTTTC
ATTGATCCATAAGGTGGAGGTGCTCGTTTCCTCCGTTATAACTGCAGTGT
CCGTGATACTCAAGTTGGATGGGCGTTGATCCACCCAGGGCGTTTGACAC
ATCAACACGAAGGATTGGAAACTACAAAAGGAACACGTTACATCATGGTC
TCTTTCATTGATCCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000103_pilon | genome | sc0000103_pilon:673136..677534 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 829-984:157 |
| Aaloc | 703-828:629 |
| Aaloc | 616-702:1050 |
| Aaloc | 556-615:1530 |
| Aaloc | 514-555:1857 |
| Aaloc | 451-513:2661 |
| Aaloc | 382-450:3011 |
| Aaloc | 268-381:3459 |
| Aaloc | 1-267:4400 |
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