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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000561_pilon:50074..53407- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_034055 ID=XLOC_034055|Name=XLOC_034055|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3334bp|location=Sequence derived from alignment at sc0000561_pilon:50074..53407- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTACTGCGCATATTAAGAACGATCTCGAAGCAACACTTGATGATCT
TTTTATCCTTGACGAAAAGGCGAGCAAGATTTTTCAAAACATCAATCACC
GATGGGTATACAATAAATTGGACAGGTTTAAACTTCACCCTGAACTTGGA
GAAAAATTTCGTGTATTCTTAGATGAGCAGCTCTCTGTTAGTGGTAGTAT
CGAAGAAAGAGCGTCCATCTGCAGATGGTTTATCAAGAAAGGCCCTCAAG
ACCCAATCATCACCATGGAATTGGACAGTATGTATTGTGTTGGTGAAATC
CCTTCTCTGGACACATGTCCTGATGTGGAAATTATTCAAGAGCATTTGGG
GTTCTATAAGATGAAACAATCAACTATCAATTCTTGTTATGAAATGGCTT
ATGATCCACAGATTTTGGAAGCATTTGCAAGCACTGAAACGTATAACCCA
AGGCGTGTGATGGTTGGTGGTCATGGTGGAAGTGATGAACCTCCCTCTAC
TAGCGAGAGTAATCGAAAGAAAATGCTAAGCCTGTTGGAAGAATTGAAAT
CTGACGCCAATTGTTACCTTCGTGTTGACATCATGACGGAAATTCTTGGT
CTAATGATCGTTGATGGTAAACAAGATGCAGAGAATACGAAGAGAGAAGG
TCCTTCTCTTGAATGTGAAATGCATTTGAATTATACGCTTAATATGACGT
TGGGTGAAATGGCTGAAAAATGTGGATGGCCCATCAAAGAGTATTGGTTT
CCAGCGTCCGCATTAGATGATCTGTCTAATGGAACGGAGGAGCCTCCAAG
GATGAAAAGATGCGTGGATAATATCGGAGATCTCATTTACCGAGCTTTTC
CTGATAACTCGTCAACACCTGATGTAACTGCGATGTCCAAAATTCTACAA
ATGTTTCTTGAGAAAGCAGATTGTACATCGTCATTGATACCACTGATAAT
CGAAATAGCTGGAGTCATTTCCAAACGAAATTTCATGCCATTTATTTGTT
TCAATGAGTTCGGTCCACTGTTCTTTGATAATGTCCCAAGCTTGAAAGTT
CAGCAATGGCCTGGAATCGCCGACAAGTTTTTGAGCAGAACAGGGAAATT
TTGGCCGATGCAAAATATGGTTGATTTGATCGTCGCCAATGGTTGTCACA
TCGTACCCAAGTCCTTTGAGGGTGGTGACAAGAAAGCTGATTGGAGAATC
TCCTTCTCTGCGGCAGGTTCTTCCAACTCTAATCTTATTTTTTCTAATTA
CTCGCTCACGGATTGAGCTTCCTAGATAGAAATTTAGGGGGGATTTTGGA
TGTCAATTTATGGATGGTTTCAAGGTTTTTCTAGTTTGACAGCTTTAGTA
TTAAATTCTGACTTTTGGGACGGCCCGGAGGTCCTATCAACTAACTTTTG
TTCGTCCATCTGCCTCTTATCAGCTTTTCTCATTTGTTTTTTTCTAATTT
TTTCGCACTAAGGGGCAAAATAGCGATACCTAAAATGTTATTTTGAGAAA
AGATTTGGATTTGGTTCAAAAAAAGCCTAAAAATGGGGTTTTTAGTTAAG
CTTTTACTTATATTTTGTATAAAGGAAGAGGGCATGGTTATCTAAAAAGT
GACTGAAACCGTTTTTTCCGGAAAATTTTTTTGAGACGCATCGGATTACT
GGATGACCTGATTTATGTTTTTAGGGAAATTGATTTTTTTTCACTATGAT
GTAAAATGGTTATAATATTTAAAATCTGACAGAACCCAATCTTCAAAAAA
ACATTTTTTTGGGCAAATTTGGGTCAAAAAATGTAGAAAAGTAAGGTTTT
TTTATTTTGTGCACAATCCTCTCATTGTTCTTTCCTGATTTTTTTTCATA
ATGATGCCTAATTGTAATCCTCAAAATGGTACTTCAAGATTTTCAATGAA
AAATATTTAGGAAGATTTGGACCCAATTTCGGACTTTGTCAAAATACGGT
TCAATCATGACACCCTCTTCTCACAGACCCACTGGGACCCCTTCTCACTG
GAAAAAATGTCCAAAATATCGTCCCCGGTGGAAAATTATGCTCTAATTTT
TGTCCCCGCTGAAAATAATCAAATAAATCAATCCTCGTTGCAAAATATTA
TGCTATTTTCTCCATCCCCACTAAATGTTTGACTTTTAAACAAAAAAAAT
TGAAATCACCAGCCATAAAAAAATTGCAATATCAATTCCCTTTGAGTTTT
AGTCCGTTATTTTTAACCAAACTGGCTGAAAAAATCCTACTGGGTCTGTG
AGAAGGGGGTGTATCATGCATCCACTCATGCACTTATGTCAGACTTATTT
TGACATATAAAAGAACTTCCGCATTTTCTATCTTAGAATTGGAGCTCACC
AAAATCCAGACCGAAAAACATCGAAAATGTTACCTAGTGGCGAAGTGTAT
TTACTACGCACGCATCAAATCATCAGTGACAGATCAAGACAAATCACTGC
CTTCCTATTTCTTAAAAACAACATGGTTCAATCTTCTGGAGCAACATCCT
GTATCGTGGTTTGAAGATCGTACAATATTCGATATTATTGGTGAATTGTA
TGGTGAACTAGCTGTTTGTTTTGGAACAGGATATATGGAAAATATCTTTA
TCAGCAAAATGAACATCCTGAGAGAGGTAGCCTTTTCCTCAAGTTTTTCT
TTCTTGTTTCATCGTCTTTGCATCAAATCAAGGACTTCCTCGCCCGGGGG
ACACTCAGGGAAAAAATGTCCAAACTTCTCAAAGTGCACTGTAAAACTAG
CCAGTTATTTATGGAAAGGTCAAATAACCTGAATAAAACCCAGTGGGATA
CTTAGGCAAATGGAGGGTACGGGTATGTGCCGTCCTTAGGGTCCCTCTAT
GGGTAAAAAAAGCCAAAAGGCTGTAATATCTATTCCCAAAAAGCCTAAAT
TTTACGAATAAAGTCCCGCTAAGGGTCCCGAAATTAAAAAAAAAATTGGT
TTATTTGTCTCGATTTGAGACCCCAAAATTTGTGATTTTCAAATATCGGG
CGGCACTCTTTCCTTTGAGTATTTTGCTTTCAAGAGTCTTTTGTTTTGTA
AGGTCGATCGCTCAAAGTTAGAAGAAGCTGAGATAATGTGCCGTGCAATT
GCTGTCGATCCGTCTGCATATTTACCGGATGATCTTATCCACGTGATGAA
AGTTGGTAAATCTGCCTTGAAATTTGGAGAGTATATGCTGGAATTCATGG
AGAAAACAGATTTAAAAATGCTAGATGGAATTTATAAATTGATTCATCCT
CCAATTAACAACAGTGTTGAGAAAGTTACGTCAAAACCGGCTATGGTTGG
TATTGTGTATGACAGTGACAGCGATTTAGATTAA Coding sequence (CDS) from alignment at sc0000561_pilon:50074..53407- >XLOC_034055 ID=XLOC_034055|Name=XLOC_034055|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3576bp|location=Sequence derived from alignment at sc0000561_pilon:50074..53407- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCTACTGCGCATATTAAGAACGATCTCGAAGCAACACTTGATGATCT
TTTTATCCTTGACGAAAAGGCGAGCAAGATTTTTCAAAACATCAATCACC
GATGGGTATACAATAAATTGGACAGGTTTAAACTTCACCCTGAACTTGGA
GAAAAATTTCGTGTATTCTTAGATGAGCAGCTCTCTGTTAGTGGTAGTAT
CGAAGAAAGAGCGTCCATCTGCAGATGGTTTATCAAGAAAGGCCCTCAAG
ACCCAATCATCACCATGGAATTGGACAGTATGTATTGTGTTGGTGAAATC
CCTTCTCTGGACACATGTCCTGATGTGGAAATTATTCAAGAGCATTTGGG
GTTCTATAAGATGAAACAATCAACTATCAATTCTTGTTATGAAATGGCTT
ATGATCCACAGATTTTGGAAGCATTTGCAAGCACTGAAACGTATAACCCA
AGGCGTGTGATGGTTGGTGGTCATGGTGGAAGTGATGAACCTCCCTCTAC
TAGCGAGAGTAATCGAAAGAAAATGCTAAGCCTGTTGGAAGAATTGAAAT
CTGACGCCAATTGTTACCTTCGTGTTGACATCATGACGGAAATTCTTGGT
CTAATGATCGTTGATGGTAAACAAGATGCAGAGAATACGAAGAGAGAAGG
TCCTTCTCTTGAATGTGAAATGCATTTGAATTATACGCTTAATATGACGT
TGGGTGAAATGGCTGAAAAATGTGGATGGCCCATCAAAGAGTATTGGTTT
CCAGCGTCCGCATTAGATGATCTGTCTAATGGAACGGAGGAGCCTCCAAG
GATGAAAAGATGCGTGGATAATATCGGAGATCTCATTTACCGAGCTTTTC
CTGATAACTCGTCAACACCTGATGTAACTGCGATGTCCAAAATTCTACAA
ATGTTTCTTGAGAAAGCAGATTGTACATCGTCATTGATACCACTGATAAT
CGAAATAGCTGGAGTCATTTCCAAACGAAATTTCATGCCATTTATTTGTT
TCAATGAGTTCGGTCCACTGTTCTTTGATAATGTCCCAAGCTTGAAAGTT
CAGCAATGGCCTGGAATCGCCGACAAGTTTTTGAGCAGAACAGGGAAATT
TTGGCCGATGCAAAATATGGTTGATTTGATCGTCGCCAATGGTTGTCACA
TCGTACCCAAGTCCTTTGAGGGTGGTGACAAGAAAGCTGATTGGAGAATC
TCCTTCTCTGCGGCAGATGGCTACTGCGCATATTAAGAACGATCTCGAAG
CAACACTTGATGATCTTTTTATCCTTGACGAAAAGGCGAGCAAGATTTTT
CAAAACATCAATCACCGATGGGTATACAATAAATTGGACAGGTTTAAACT
TCACCCTGAACTTGGAGAAAAATTTCGTGTATTCTTAGATGAGCAGCTCT
CTGTTAGTGGTAGTATCGAAGAAAGAGCGTCCATCTGCAGATGGTTTATC
AAGAAAGGCCCTCAAGACCCAATCATCACCATGGAATTGGACAGTATGTA
TTGTGTTGGTGAAATCCCTTCTCTGGACACATGTCCTGATGTGGAAATTA
TTCAAGAGCATTTGGGGTTCTATAAGATGAAACAATCAACTATCAATTCT
TGTTATGAAATGGCTTATGATCCACAGATTTTGGAAGCATTTGCAAGCAC
TGAAACGTATAACCCAAGGCGTGTGATGGTTGGTGGTCATGGTGGAAGTG
ATGAACCTCCCTCTACTAGCGAGAGTAATCGAAAGAAAATGCTAAGCCTG
TTGGAAGAATTGAAATCTGACGCCAATTGTTACCTTCGTGTTGACATCAT
GACGGAAATTCTTGGTCTAATGATCGTTGATGGTAAACAAGATGCAGAGA
ATACGAAGAGAGAAGGTCCTTCTCTTGAATGTGAAATGCATTTGAATTAT
ACGCTTAATATGACGTTGGGTGAAATGGCTGAAAAATGTGGATGGCCCAT
CAAAGAGTATTGGTTTCCAGCGTCCGCATTAGATGATCTGTCTAATGGAA
CGGAGGAGCCTCCAAGGATGAAAAGATGCGTGGATAATATCGGAGATCTC
ATTTACCGAGCTTTTCCTGATAACTCGTCAACACCTGATGTAACTGCGAT
GTCCAAAATTCTACAAATGTTTCTTGAGAAAGCAGATTGTACATCGTCAT
TGATACCACTGATAATCGAAATAGCTGGAGTCATTTCCAAACGAAATTTC
ATGCCATTTATTTGTTTCAATGAGTTCGGTCCACTGTTCTTTGATAATGT
CCCAAGCTTGAAAGTTCAGCAATGGCCTGGAATCGCCGACAAGTTTTTGA
GCAGAACAGGGAAATTTTGGCCGATGCAAAATATGGTTGATTTGATCGTC
GCCAATGGTTGTCACATCGTACCCAAGTCCTTTGAGGGTGGTGACAAGAA
AGCTGATTGGAGAATCTCCTTCTCTGCGGCAGAATTGGAGCTCACCAAAA
TCCAGACCGAAAAACATCGAAAATGTTACCTAGTGGCGAAGTGTATTTAC
TACGCACGCATCAAATCATCAGTGACAGATCAAGACAAATCACTGCCTTC
CTATTTCTTAAAAACAACATGGTTCAATCTTCTGGAGCAACATCCTGTAT
CGTGGTTTGAAGATCGTACAATATTCGATATTATTGGTGAATTGTATGGT
GAACTAGCTGTTTGTTTTGGAACAGGATATATGGAAAATATCTTTATCAG
CAAAATGAACATCCTGAGAGAGAATTGGAGCTCACCAAAATCCAGACCGA
AAAACATCGAAAATGTTACCTAGTGGCGAAGTGTATTTACTACGCACGCA
TCAAATCATCAGTGACAGATCAAGACAAATCACTGCCTTCCTATTTCTTA
AAAACAACATGGTTCAATCTTCTGGAGCAACATCCTGTATCGTGGTTTGA
AGATCGTACAATATTCGATATTATTGGTGAATTGTATGGTGAACTAGCTG
TTTGTTTTGGAACAGGATATATGGAAAATATCTTTATCAGCAAAATGAAC
ATCCTGAGAGAGGTCGATCGCTCAAAGTTAGAAGAAGCTGAGATAATGTG
CCGTGCAATTGCTGTCGATCCGTCTGCATATTTACCGGATGATCTTATCC
ACGTGATGAAAGTTGGTAAATCTGCCTTGAAATTTGGAGAGTATATGCTG
GAATTCATGGAGAAAACAGATTTAAAAATGCTAGATGGAATTTATAAATT
GATTCATCCTCCAATTAACAACAGTGTTGAGAAAGTTACGTCAAAACCGG
CTATGGTTGGTATTGTGTATGACAGTGACAGCGATTTAGATTAAGTCGAT
CGCTCAAAGTTAGAAGAAGCTGAGATAATGTGCCGTGCAATTGCTGTCGA
TCCGTCTGCATATTTACCGGATGATCTTATCCACGTGATGAAAGTTGGTA
AATCTGCCTTGAAATTTGGAGAGTATATGCTGGAATTCATGGAGAAAACA
GATTTAAAAATGCTAGATGGAATTTATAAATTGATTCATCCTCCAATTAA
CAACAGTGTTGAGAAAGTTACGTCAAAACCGGCTATGGTTGGTATTGTGT
ATGACAGTGACAGCGATTTAGATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000561_pilon | genome | sc0000561_pilon:50074..53407 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1507-1788:283 |
| Aaloc | 1219-1506:997 |
| Aaloc | 1-1215:3335 |
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