|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000066_pilon:1577459..1582865- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033445 ID=XLOC_033445|Name=XLOC_033445|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5407bp|location=Sequence derived from alignment at sc0000066_pilon:1577459..1582865- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGACCAAAAAGGAAGCAGCTCCTGTGAATTATGTCCATCAAACAGC
AATAAACTTGGAGACCATTAAGAAAGAGCAGAAGAACCAGAAAATTTACA
CAAACTACAGTATAAACCCTTTCAAGAAAAGTAAGTTCTTAAAATATATA
CAAACACAGTTCAATACTGTTCAATATGATGCAATCAAAGAATTTTGACG
AAAAAATTGTGTCTTTGACTTTGGTGGTTTTGTTCATATCCAATGCAATC
TTTTTTATTCTTGGGTACAAAACAGAATGCCAGGATGATTTCATTCCTTA
AATACAGTATTTCTTCAAAATAAACGTCTCCCTTTTTTGAAACGCCCCCT
CAAACAGTTACATCAATATGCCTTCTTACCTGTCTTTAAAAATATCAATA
AAAGTAATCAAGGAAAAGGACGCGAAAAAAAGACACAAGTGTGAGAACAG
AGTAATCAAACTAGTTAGAAAAAGTACCATTAAAAGTCCTAAAAAATCAA
CCTGAATAATTGCAATCGAAATTCCAGAGAACTTCATAATTCCCCAAACA
GCCTTAAATTACTATGTCAAACTCCCATCACATACATTTTACAATTACGT
CAGAGTAGACTACGCTCGCCACCGAAGAGGTTTATTTAGAAAGGGTAATT
ATATTTATTGTTCGCTTCCTTTTTAAAGATTCACCGGGTTGGAAAAGTAT
AAATTTCTTTGTACATATTTTACCTACCCCAAATATTTAGGAGGCTGAGT
TGTAAACGAATCATCAAGTTGAAACAAACGATAAATATATCAAGGTCTGT
TTTATTTACCCCCTGGTGACTTAACAAAAGAGACTTAACTCTATGTTACA
ATCCAATTATTGAAAGTTGGTCTCTGCCTTTTTATAATGAGCGAGACATA
CGTTCTCTGATTACGCAATTTTCATATTGACATTTTCGAGGCATTTTGAT
GTAACTGTCAAATATTAACTCAAAGTTTGAGGAATAAGTTTTTAAAAAAC
AGCCAATTCAAATTCAAATTCAAATAAACACCTTTCATTTTTCCAAATTG
AAAACTTGTGCTTTTGAAAGCTTTTTGTGAGTTAATTCATTCAGGGCGCA
TGAAAGTTTATTTTGAATAAAATCAATAATTAACTTGAAAACTGCCGTGA
ATTTTACGCTGATAATTTTCAAAAAACCGTACCAAGACGAAAAATAACCG
TACCTCGCAAGATTTTTGGATGAACAGATAAAGTCACTTTCTGTATTTGA
AGAAGCCTTTTACAGTATAGACCTAACTCTTCATACAGAAATTACGGGAA
ACGCACACATTTGGACTTCGATTTGTACCCTATGCTATGCTGCGTACGCA
AGCACTTCAGCCAAAGTCCCCCAAAAGCAGGACAAAAATCTGTTTTTTCA
TTTCATCATTTCCATGGAAGTTGTTGGAATATTTACAAGACTCTTGACAG
AGAATACTTTGTTTTATTTTCAATGATGCCAGTGCCGTTATTAATTTTCA
GATCTGACATATTGATGTTTGTAAGTGCACTTTATAGTTTTGATTCCCAT
TAAAGAATCATATTCTGGTTTTCATGTTATTAGTTGCTGTTTTAGAGTTT
TAGAGCTTTAGAGCTTTAGAGCTAGCCTGTTATAAATGTTTTCAAATATG
TGAAAACATTTATAACAGAAAAGTGGAAAAGAAATTGGCTAATAGTGAGT
AAAATTCACAAAATTGACCAAAACGTCAAAAAGCTTCCAGATATGGCAGT
CCGAAAAAGATTCCGTATCCGGATGTTGATTAGGGGCGATGTCTAGGAGG
GGCGTTTATTTGAAACAAGTAGCTGTAAGGAAGTATAATATAAGAAAAAA
CTTAGATATACGATGATTAATTTTACAGTACTCTTTTAGTATTTGGAACT
GATTACTGATTACAGAATATTTGTACTCAAATAATAAGGGGTCACTCAGG
GTCACTCCACAAATCGATTTTAGGTTAAAAAAATGTCAATTGACATTTAA
AAAGCTAACCCACCCACTCATACCCCAAAACGTCAAACACCCTAAATCCC
AAAAAATCAATGAAAAACTGCCTTTATCGCTGTTTCGTCAGCCTACTGTA
TCTTTCTTTTTTACTACAGACCGCACTATTTTAAATTTGAAATATAACGC
TAACAGAGATAATTTCAAAACTTACTCAAAAATTCCCATAATTAATTATC
TCTGTAATATAATAGTGGCAGAAACAGACGACCATCTGAAAAATTCAAGG
GCTGTGCGGGCCATCCAACAAAGAGAAGACATAAATATTAGGCCGTTTGT
TTTGGTTTTCAACAAAGCAACAAAAAAGAAACATGGCAAGAAGTACCATG
AGAACAGGTAACTTGCATTAGTGGAGGCTAACATGCATAAATGAATCAAA
ATGAATGACCTGGTTAGTCATTAAAATACAAAGTTAAATCAAAAGAAAAA
TGGTAGAGTTGAGCTGCGAGCAGAGCTGCGTTGTTCATTTGTTTTGAAAT
TTTGCTGCTTTGATTGGTCAAGTCATTTGTTGGCTATGCAAGTTTCCTTC
CACTGTTGCAAGTTACCCAACTTTGCGGTAACATTCTAGGTAACATTTGG
CATGAAAAATCAATGTTTCTGGATTTTACAATTAAAACGTCAACAACCTT
TGAACCACCCACCCACCCACTAATTTTCTAACCTAAAATCAATTTGTGAG
TTACTCCTAATGAAAAGGCAAAATAAGGTTTCAATTACTTTATTAAAGTG
ACCACGGTTTACATTATTTAATAAACACCCCCTCCTTGAATAACGCCCCT
CCATAAAATCACAAAATGTAATAAATAAACGCCTGGGGTGTTTATATTGA
AAGTAATACAGTATTTATGATCACAAAAAGAAGAAATTTTCAGAACCGTG
GAAGATTAGAAGAACTTTTTCTGCCCACCCCCTTGCCCTGCCTCATCGCC
CGTTGGTATATACAGATATGACTGAATCCCGCACAAAGCTGTGCAATAAT
GATGTGAGTAGAACTCAAGTATTTTCTATAAAGATTTTTATAAATCTCAA
GATTATTTTCCAGACTCGATCAATCAAACTTGTCAAACCAATCAAAGAAC
CGAACTGATCAAACTCCATCGAACTATTAAAGTTTGAGTAAAAAAATTAA
TCTAACTCAATTTTGAGTGTTCTATCAAGTTTGGTCGATGGGTTGCGGTT
TGATCAGTTTGATAATCCAATTTTGTTTGACAAGTTTGTTGTGCTCCGCC
GAATATCAGCTTCTGTTGAAAGTCAAATTAGAAATGTAAATTGGGAAATT
GTTTCTGGCGACAGATTGAACTTTTATCCTGTATCCTTTCGACACCATCA
CCAGGGCGGTACCTAGCGGTTTACCATGTGGCTGTGAGCAAAACCTTGAC
AGAGGAGCTACAGACTTTGTTCATGATAGACAAAACATCTAGGTACACAA
TAATCCTTAAGTCTGGGAACCATTGAAATGGTGGTAGCTGCGTGTCGCGA
TAAAAAGTTTTGCAAGTGAGGGAAGAGGTGAGGATTGGAAATCATCATAA
ACTAATTGAACTTTTTACTGGAGGAAGTAATCAAACTCCTATTGACTTCA
AAAATTGTGAGTGTGAATGATACAATATTTCATTTTTCTTCATTTTAGTG
TATACATTGTCAGGAAAACCAAATTCATTGCACGATTCTGCTGATGGTGA
AGAAGATGGTCAGTTCCTTTAATTGTATTTTGTATTTTGACTTTAACCAT
TATTAAGTTCATAGATAAAAAAAGCTTTGACAACTATATACTTAAAATAA
TGTGAATCTCCAAGCCAAAATATGATAAAGTACCTGGAAACTGAATATTC
ACTAAAAAAGGGTTTGGTTAATACATGTGCGTTTTTTAATAATTCAATAA
CCAGTCCTAGAAAAGCCTTGATCTACTGATTGACTTCTTTGTTTAAGAAA
AACTTGTTTACATTGATACCTATATACATACACTATGAATAGGTCAAAAT
CACACTTTTTTTAATAAGAATAACTTTATAAGATAATTATGATGAAACTA
ACCAAATAAATTGAGAACATGCTAAGAAAAGCACCATCATGGAATTTGGC
AACTGACCTTTAGAATGTGGATTTTACCTATAAAATGTCAATTATCCCCA
AGTGATAGGCTAAAAACTTTCACAAAAATGCCAAATCTTTGCTTGAGGTA
TACATTTTGGCTTGGTTGGATCCTAACCTAAGAATACTGTAGGAATATTT
TAGAATGAATTTCCTTAGAAGTTAAGATTATCCATGATGAAATGGAAAAA
TGACATTCTTTTAAAAAAGCATGTAAATGGCCTTACATTACACCATGATC
ATATCTGTTTGCAGGTGGTATACCCTGAGAAACAACAGTCAGCTAAATAT
TGTTTTAACAAAGGGACAACAAGAACAGAAAGTTATAAAATTAGATGTCC
CAAATGAATAGTTTTATTTATGATATATTCTTAAAATATTTCTTTTAAAT
TTATATCAAATTTCGCATGATCACAATCTTCTTTTAGATGATTTTTTGCA
AGTAATCAAGAGAGCCAATCAAACGCCAGTGGAGAAATTTGAATTCCCAC
AAACAGAGGCACAAGAAATTGGCTGGTGCACAAAACCATTGGTAAGGTCT
CAATTCAACCAACGACTTCAACTACATAATAAGTAACAGATATTATTCAC
ATATTAAATTAATTGAATATTAAAAATGAGCTTTTTACTTCAGGGAACTT
TTAGATAAGATTTTGTTAGTGTGCAATTGGTTTTATAAAAAACAAAATTA
ACTGAAGAGTTTTGCTCACTTCAAAAAGAGGGACTGGATTGAAATTTAAA
GATATTTTTGTTTATCATATATCGTAAATTCTTACAATATATGGCACATT
AGCCTGATGAGCAGAGTAAATATTTCAAGTCCTAGGTCATTTAATCTGCC
ATATTGGCTGATGTCAAGCCCAAACTATTCTATGTTCTTCTCTTAACTTC
TTCTAACTACTTCCCATATAAATGAAGCGTGTCCAGTTTCAGAACTAACT
TGCCATGATTTTTTCAATTTTGTTTTGAAATTCAAACGTTCAAAAATTTA
AATTAAGGTACAGTAAATTAAAAAACAACATGACGGACCAGTTGACTTCA
AAAATGGACACTTAATGGACACACTTCCTCAGGAAATTTGTAAGCAGTTA
TCCCATCTAGTGTGTAAAGGAATATGATATCTGTGGCTCATCCTTATTTT
GTATTATTTTTATTTTCACATCTGCTCTGATTAATCACAATAGATTGTTC
AACCGAAAGACGATGCACGGCTACACCATCCCAAGAAACATTCTGAAATC
ACCAAATTCATGGATGCCTACTGGAGACAAAAAGAACAATCTGAAAATCT
AAATTAA Coding sequence (CDS) from alignment at sc0000066_pilon:1577459..1582865- >XLOC_033445 ID=XLOC_033445|Name=XLOC_033445|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=816bp|location=Sequence derived from alignment at sc0000066_pilon:1577459..1582865- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGACCAAAAAGGAAGCAGCTCCTGTGAATTATGTCCATCAAACAGC
AATAAACTTGGAGACCATTAAGAAAGAGCAGAAGAACCAGAAAATTTACA
CAAACTACAGTATAAACCCTTTCAAGAAAAATGGCGACCAAAAAGGAAGC
AGCTCCTGTGAATTATGTCCATCAAACAGCAATAAACTTGGAGACCATTA
AGAAAGAGCAGAAGAACCAGAAAATTTACACAAACTACAGTATAAACCCT
TTCAAGAAAATGTATACATTGTCAGGAAAACCAAATTCATTGCACGATTC
TGCTGATGGTGAAGAAGATGTGTATACATTGTCAGGAAAACCAAATTCAT
TGCACGATTCTGCTGATGGTGAAGAAGATGATGATTTTTTGCAAGTAATC
AAGAGAGCCAATCAAACGCCAGTGGAGAAATTTGAATTCCCACAAACAGA
GGCACAAGAAATTGGCTGGTGCACAAAACCATTGATGATTTTTTGCAAGT
AATCAAGAGAGCCAATCAAACGCCAGTGGAGAAATTTGAATTCCCACAAA
CAGAGGCACAAGAAATTGGCTGGTGCACAAAACCATTGATTGTTCAACCG
AAAGACGATGCACGGCTACACCATCCCAAGAAACATTCTGAAATCACCAA
ATTCATGGATGCCTACTGGAGACAAAAAGAACAATCTGAAAATCTAAATT
AAATTGTTCAACCGAAAGACGATGCACGGCTACACCATCCCAAGAAACAT
TCTGAAATCACCAAATTCATGGATGCCTACTGGAGACAAAAAGAACAATC
TGAAAATCTAAATTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000066_pilon | genome | sc0000066_pilon:1577459..1582865 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 295-408:115 |
| Aaloc | 193-294:869 |
| Aaloc | 133-189:1758 |
| Aaloc | 1-129:5408 |
|
