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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:649117..650955- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033409 ID=XLOC_033409|Name=XLOC_033409|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1839bp|location=Sequence derived from alignment at sc0000078_pilon:649117..650955- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCAATCACCACGGTACTGTAACCGCTGTGGAGGCCGCTACTATGT
GCCGGATTCATTAAGAGTAACAGCTTTAACGTTTAACTGCTACAGCTGCA
ATCAAGAAGGTCTAGATTACCATAGAAGATTTCCAAATTTATCTGGTTCA
GCTTGGAGTGGACAAAGTAATGGTGGTCTTCGAAATGATTACCGACCAAA
GATTGAAATCTGGTCTATTGAATCAACAGGAACGCCATACAAGATTTGTT
CTTTTAAGACTGGTTCAAAGAGTAACATTTTAGACGTTAGAAATGAGGTT
TCCAGAATAACCGGAATCTCTCTTAAAGATCATAGACTGTACCATTACAA
TAGAAATCTTTCCACTGATCGAAGTCAAATCAAGGGAAATCTCTTGAGTG
ATTGGGAGCCAGTACACAAGTATTACATCAATGTAGACAAGTTTATAATG
GTTGTGGAACTCAAGGCCAAGATTAAAATCATGTCTATTAAAAACTCGGA
AGAAATTTGCTCTTTTGAAATTGATAAGTCCAGCAAAATTAGACATGTTA
AAGAAATGGTTGCTAAAGAAATTGACATACCTCCTGAAGATCAAAGATTG
TATCGGTACAATGAATATTGTAGAATGTTTAAAGCAGATTGGTCAAAGGA
GGAATACGATTCTGGTTTCGTCGCGATCGATCAAAGAAACCAAAACGTTT
TGCCTTTAAATGATTTTGATAAAATAAAGTATACCTTTGGAGTTACTAAC
AAATATATCATTTGTGTTGAACGAAATATTGTGGACGAGGATACATTGAG
AATATGCCGTGATAGAGGTATTAGTGTTATTGATATGATACCTATCATGA
CTATCAACCCTCCATTTCCATCCATGGAAATCCTTACGGTGGAAGTTCCC
GAAGGATGTTCGATTTCAAATCTTAAATCGATTATTCATTTCAAAACCGG
TCTATCGGTCAAAGAACAAATCTTGACAGATGGTCAAGAGAGAGTTTTAG
ATGATTCGTATGACATTTTAAGTTCTACTGAGCATTGTTCAAAAGACTGG
GAGCGAATGTATTTAACGTTGTTGAGTGGTGGCGATCATGAAACACAAAG
AATATGTGACAGGCACAATATAAATTGTATATCGACATTTAAATTAAATT
TTCTGACAAAAACCGTGGAGTTGAAGTTCCAAAAGTTTCGGTTAATAAGT
GATGTGAAAATGCAAATTCAAAAAGAATTTAACATAAGAGTTGGTGATCA
AGTTTTGATTTATAAAGGGAAAAAATTAACTGACAATCAAATTACTAGAA
ATGCGTTTCTGGAAAACAAATTGAACACATTGAAAGACGTATCTTTAAAC
TTGGTTATTGACAAAAAGCCATTTCAAGTCAGAATATCACCTGAAATACA
ATATATATCAAGGTTTAACATCTCTATCAATGATTCTGACAGCATTGAAG
TGTTGAAACAAAAAATACAAGCAAAAACATCAATTCCTCTGCAAAATATA
CAGCTCAAAGACAATACTACACACGAGATTTTGTGTGATACGAAAATAGT
CGAAGATTGTAAGTTTCTAGACAAATCAGTGATCACTTTGCAACAAAAAC
TATTCATTAGACTTCACTTTGAGAAAGATAATCGAGTCGAGGAGAGAGTT
GAAATTTTACCAAAATATGAACAACGAAGCAGATTGGATCTTTCGGAAGA
AATTCGCAAATCTTTCTTACCGAGGCAAATGAGCGTCAATGAAATTAAAG
GTGAATTTACATTTGGTCATCCTACCATAAACAGAATCAATGAAATAGAT
TTTCGAATCAAAAAAACTAGAAAATGCTTGATAATGTAA Coding sequence (CDS) from alignment at sc0000078_pilon:649117..650955- >XLOC_033409 ID=XLOC_033409|Name=XLOC_033409|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3678bp|location=Sequence derived from alignment at sc0000078_pilon:649117..650955- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATCAATCACCACGGTACTGTAACCGCTGTGGAGGCCGCTACTATGT
GCCGGATTCATTAAGAGTAACAGCTTTAACGTTTAACTGCTACAGCTGCA
ATCAAGAAGGTCTAGATTACCATAGAAGATTTCCAAATTTATCTGGTTCA
GCTTGGAGTGGACAAAGTAATGGTGGTCTTCGAAATGATTACCGACCAAA
GATTGAAATCTGGTCTATTGAATCAACAGGAACGCCATACAAGATTTGTT
CTTTTAAGACTGGTTCAAAGAGTAACATTTTAGACGTTAGAAATGAGGTT
TCCAGAATAACCGGAATCTCTCTTAAAGATCATAGACTGTACCATTACAA
TAGAAATCTTTCCACTGATCGAAGTCAAATCAAGGGAAATCTCTTGAGTG
ATTGGGAGCCAGTACACAAGTATTACATCAATGTAGACAAGTTTATAATG
GTTGTGGAACTCAAGGCCAAGATTAAAATCATGTCTATTAAAAACTCGGA
AGAAATTTGCTCTTTTGAAATTGATAAGTCCAGCAAAATTAGACATGTTA
AAGAAATGGTTGCTAAAGAAATTGACATACCTCCTGAAGATCAAAGATTG
TATCGGTACAATGAATATTGTAGAATGTTTAAAGCAGATTGGTCAAAGGA
GGAATACGATTCTGGTTTCGTCGCGATCGATCAAAGAAACCAAAACGTTT
TGCCTTTAAATGATTTTGATAAAATAAAGTATACCTTTGGAGTTACTAAC
AAATATATCATTTGTGTTGAACGAAATATTGTGGACGAGGATACATTGAG
AATATGCCGTGATAGAGGTATTAGTGTTATTGATATGATACCTATCATGA
CTATCAACCCTCCATTTCCATCCATGGAAATCCTTACGGTGGAAGTTCCC
GAAGGATGTTCGATTTCAAATCTTAAATCGATTATTCATTTCAAAACCGG
TCTATCGGTCAAAGAACAAATCTTGACAGATGGTCAAGAGAGAGTTTTAG
ATGATTCGTATGACATTTTAAGTTCTACTGAGCATTGTTCAAAAGACTGG
GAGCGAATGTATTTAACGTTGTTGAGTGGTGGCGATCATGAAACACAAAG
AATATGTGACAGGCACAATATAAATTGTATATCGACATTTAAATTAAATT
TTCTGACAAAAACCGTGGAGTTGAAGTTCCAAAAGTTTCGGTTAATAAGT
GATGTGAAAATGCAAATTCAAAAAGAATTTAACATAAGAGTTGGTGATCA
AGTTTTGATTTATAAAGGGAAAAAATTAACTGACAATCAAATTACTAGAA
ATGCGTTTCTGGAAAACAAATTGAACACATTGAAAGACGTATCTTTAAAC
TTGGTTATTGACAAAAAGCCATTTCAAGTCAGAATATCACCTGAAATACA
ATATATATCAAGGTTTAACATCTCTATCAATGATTCTGACAGCATTGAAG
TGTTGAAACAAAAAATACAAGCAAAAACATCAATTCCTCTGCAAAATATA
CAGCTCAAAGACAATACTACACACGAGATTTTGTGTGATACGAAAATAGT
CGAAGATTGTAAGTTTCTAGACAAATCAGTGATCACTTTGCAACAAAAAC
TATTCATTAGACTTCACTTTGAGAAAGATAATCGAGTCGAGGAGAGAGTT
GAAATTTTACCAAAATATGAACAACGAAGCAGATTGGATCTTTCGGAAGA
AATTCGCAAATCTTTCTTACCGAGGCAAATGAGCGTCAATGAAATTAAAG
GTGAATTTACATTTGGTCATCCTACCATAAACAGAATCAATGAAATAGAT
TTTCGAATCAAAAAAACTAGAAAATGCTTGATAATGTAAATGAATCAATC
ACCACGGTACTGTAACCGCTGTGGAGGCCGCTACTATGTGCCGGATTCAT
TAAGAGTAACAGCTTTAACGTTTAACTGCTACAGCTGCAATCAAGAAGGT
CTAGATTACCATAGAAGATTTCCAAATTTATCTGGTTCAGCTTGGAGTGG
ACAAAGTAATGGTGGTCTTCGAAATGATTACCGACCAAAGATTGAAATCT
GGTCTATTGAATCAACAGGAACGCCATACAAGATTTGTTCTTTTAAGACT
GGTTCAAAGAGTAACATTTTAGACGTTAGAAATGAGGTTTCCAGAATAAC
CGGAATCTCTCTTAAAGATCATAGACTGTACCATTACAATAGAAATCTTT
CCACTGATCGAAGTCAAATCAAGGGAAATCTCTTGAGTGATTGGGAGCCA
GTACACAAGTATTACATCAATGTAGACAAGTTTATAATGGTTGTGGAACT
CAAGGCCAAGATTAAAATCATGTCTATTAAAAACTCGGAAGAAATTTGCT
CTTTTGAAATTGATAAGTCCAGCAAAATTAGACATGTTAAAGAAATGGTT
GCTAAAGAAATTGACATACCTCCTGAAGATCAAAGATTGTATCGGTACAA
TGAATATTGTAGAATGTTTAAAGCAGATTGGTCAAAGGAGGAATACGATT
CTGGTTTCGTCGCGATCGATCAAAGAAACCAAAACGTTTTGCCTTTAAAT
GATTTTGATAAAATAAAGTATACCTTTGGAGTTACTAACAAATATATCAT
TTGTGTTGAACGAAATATTGTGGACGAGGATACATTGAGAATATGCCGTG
ATAGAGGTATTAGTGTTATTGATATGATACCTATCATGACTATCAACCCT
CCATTTCCATCCATGGAAATCCTTACGGTGGAAGTTCCCGAAGGATGTTC
GATTTCAAATCTTAAATCGATTATTCATTTCAAAACCGGTCTATCGGTCA
AAGAACAAATCTTGACAGATGGTCAAGAGAGAGTTTTAGATGATTCGTAT
GACATTTTAAGTTCTACTGAGCATTGTTCAAAAGACTGGGAGCGAATGTA
TTTAACGTTGTTGAGTGGTGGCGATCATGAAACACAAAGAATATGTGACA
GGCACAATATAAATTGTATATCGACATTTAAATTAAATTTTCTGACAAAA
ACCGTGGAGTTGAAGTTCCAAAAGTTTCGGTTAATAAGTGATGTGAAAAT
GCAAATTCAAAAAGAATTTAACATAAGAGTTGGTGATCAAGTTTTGATTT
ATAAAGGGAAAAAATTAACTGACAATCAAATTACTAGAAATGCGTTTCTG
GAAAACAAATTGAACACATTGAAAGACGTATCTTTAAACTTGGTTATTGA
CAAAAAGCCATTTCAAGTCAGAATATCACCTGAAATACAATATATATCAA
GGTTTAACATCTCTATCAATGATTCTGACAGCATTGAAGTGTTGAAACAA
AAAATACAAGCAAAAACATCAATTCCTCTGCAAAATATACAGCTCAAAGA
CAATACTACACACGAGATTTTGTGTGATACGAAAATAGTCGAAGATTGTA
AGTTTCTAGACAAATCAGTGATCACTTTGCAACAAAAACTATTCATTAGA
CTTCACTTTGAGAAAGATAATCGAGTCGAGGAGAGAGTTGAAATTTTACC
AAAATATGAACAACGAAGCAGATTGGATCTTTCGGAAGAAATTCGCAAAT
CTTTCTTACCGAGGCAAATGAGCGTCAATGAAATTAAAGGTGAATTTACA
TTTGGTCATCCTACCATAAACAGAATCAATGAAATAGATTTTCGAATCAA
AAAAACTAGAAAATGCTTGATAATGTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:649117..650955 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1-1839:1840 |
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