|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:877044..879270- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033395 ID=XLOC_033395|Name=XLOC_033395|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2227bp|location=Sequence derived from alignment at sc0000078_pilon:877044..879270- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGATGATCAGATAGTCATAAAGTATGAAGAATCCTTTACCAACAA
CAATAACAACCTGAACAATGAAGGTTCTTCATCACAATCAGAGCGGTCAC
CCTCGTCACCTTTAGGCTTGTCAGAACTAGAGAGTTCAACAACATTGGGC
AACATAGCTCAAAATGTGAACCCTAATGACAAAATGGCCATCTACCAACA
TCCATTGTTTCCACTTTTACGCTTGCTTTTTGAAAAGTGTGAATCTGCAA
CCAAGTCTATTGACAATGCTGACTCTCTCTGTTTTGAAGCTGAGATGAAA
GCCTACATCACGGAAATGGCGAAAGTCAACAAACCTTTCTTCACAGATAA
TGTTGAAGTTGACACTTTGGTAAGATTCTTCTTCCCCTTTTATCATATTA
CTTACTGTTTTGTTTTTTTTCTTACAAAAGCTTTACTCCATTTTCAAGCA
TTCCCAAAATGAATAGATAATTTTGGTAAAGGTAGTGCATAAGTTAGGTA
ATAAGAGGACGCCTTCCTAACAAGTTCAGATCAAAGAGATCTAGAGTAAT
TGCTTTCAGAAAAAACTTACAAGGGATTTGATAGCAATGCCTAAAATGTC
CAATATGAAAATACATAAAAAATATTGATAGTATATCATCTATAGAATGA
ATACCTTTATTCCTTTGATCATAGATGCTGAAATCACTTCAAGTCTTGGC
TATCCACCTTCTGGAACTTGGAAAAGTGAATGAATTATGCAAGGACTTTT
GTACAAGATACATATCGTGCTTAAAAGGAAAGTTGAACAGTGAAAATATT
ATGAGAACATTAGACATTCAAAACACACCACCTGGCTCACCTACTTCTCC
TAAGAATCCCACACAACCTATGTCAGACGTCACAATGGTTGGATCTACAA
TTGATGCTTCTATTCTAGCTCCACCAAAAACACCAACAGCTGTCCCAGTA
AATGGTCGAAGCTCTTCAACTTCATCTTTAGAAAATAACAACACTACTTT
GAAAGAAGACTTCTCGATTCATCGCTCAATGTCTGTTGACACTCCAAGTT
TTATTGGTGCAGCTGGATTGGCAACACCAATGTCGCCTGAACAACTGACA
GGCTTTCTTACCAAGAAGAACAAGGGTGGTAAAAGGGGAACACTTCCAAA
AGTAGCAACAAATGTACTGAAAGCATGGCTGTTCCAACACTTAGTTGTAT
GTGACTTTCTTTTTAAAACTCTTATTTACAAAGAGGTATTAGCGAACATA
ATCAAATCCAAATTTCATTGGTCAAGGTGAACATTTTTAGGTTAACATAC
AAGTATATTGAACTGGAATTTGTCCTTGACTTTTACTCTATCTCAAACTT
TAACTTTTATTTAACTTTCTCATTTCAGCATCCCTATCCATCTGAGGAAG
AGAAGAAGCAACTAGCAGTACAAACCAACCTTTCCATATTACAAGTCAAT
AATTGGTATTTTGTTATTCTTGTACTGTAAAGTCTTTTTACAAAATAAAA
CACAATTTGTAGTCTTTAAATACCATACACCCGAGGGAAAAAAGGGGCTA
ACCTTTCAGAAAATGATTTTGTCTGTATGAATTTATGACTGTTAAATTGT
GAAGAACTTTGATTTAGAAAGGTATGTGCATTTTTCACCTTTGAACATGC
AAGAAGTTTACTTTGTTGTGTGGGGAAAAAATCATTTATGTTCTAAGGCG
TGGCTGGGTGATTATTTTATTTCTCCTGCGTCTTTTGGTTTTGAAAATTA
TGAAAATAAAAATAATGGACGATTCGTTTCAGGTTCATCAATGCACGTCG
TCGTATTATTCAACCCATGCTTGATTCCTCCAGCACTGTCTTGAAGAACA
ACAAAAAACCTAAACAACCACGGAACGCAGCTCAAAAGGGCTGGGCAAGC
ACCATGGAAGAACTTAGCACAACCAATAGACCTGGCCCTTTAAGTCCTCC
AGCTCAACAACCTGTACGATACATGATGAGTCCTGTCACTTCTTCGGCAC
CCGGTCCAGTCTTACTTAACCTTGGAGCACAATCGACAAACCAACCTTCC
ACAACACAGTCCATGTTGATGAGTCCGGTACAGTTTGTTCAAGTCAACCA
GATCCCTTCTATGCAGAGCATACAGGCTGCAACAGGCTACCTACCAGCTC
ACACTGCCAGCACACAAACCTCATTCCCCTCTACCACTGCTGCTAATTCA
GTAGAATCCTCTACTAAGGATGCATGA Coding sequence (CDS) from alignment at sc0000078_pilon:877044..879270- >XLOC_033395 ID=XLOC_033395|Name=XLOC_033395|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2826bp|location=Sequence derived from alignment at sc0000078_pilon:877044..879270- (Clytia hemisphaerica_ch_hm2_pilon)
ATGACTGATGATCAGATAGTCATAAAGTATGAAGAATCCTTTACCAACAA
CAATAACAACCTGAACAATGAAGGTTCTTCATCACAATCAGAGCGGTCAC
CCTCGTCACCTTTAGGCTTGTCAGAACTAGAGAGTTCAACAACATTGGGC
AACATAGCTCAAAATGTGAACCCTAATGACAAAATGGCCATCTACCAACA
TCCATTGTTTCCACTTTTACGCTTGCTTTTTGAAAAGTGTGAATCTGCAA
CCAAGTCTATTGACAATGCTGACTCTCTCTGTTTTGAAGCTGAGATGAAA
GCCTACATCACGGAAATGGCGAAAGTCAACAAACCTTTCTTCACAGATAA
TGTTGAAGTTGACACTTTGATGACTGATGATCAGATAGTCATAAAGTATG
AAGAATCCTTTACCAACAACAATAACAACCTGAACAATGAAGGTTCTTCA
TCACAATCAGAGCGGTCACCCTCGTCACCTTTAGGCTTGTCAGAACTAGA
GAGTTCAACAACATTGGGCAACATAGCTCAAAATGTGAACCCTAATGACA
AAATGGCCATCTACCAACATCCATTGTTTCCACTTTTACGCTTGCTTTTT
GAAAAGTGTGAATCTGCAACCAAGTCTATTGACAATGCTGACTCTCTCTG
TTTTGAAGCTGAGATGAAAGCCTACATCACGGAAATGGCGAAAGTCAACA
AACCTTTCTTCACAGATAATGTTGAAGTTGACACTTTGATGCTGAAATCA
CTTCAAGTCTTGGCTATCCACCTTCTGGAACTTGGAAAAGTGAATGAATT
ATGCAAGGACTTTTGTACAAGATACATATCGTGCTTAAAAGGAAAGTTGA
ACAGTGAAAATATTATGAGAACATTAGACATTCAAAACACACCACCTGGC
TCACCTACTTCTCCTAAGAATCCCACACAACCTATGTCAGACGTCACAAT
GGTTGGATCTACAATTGATGCTTCTATTCTAGCTCCACCAAAAACACCAA
CAGCTGTCCCAGTAAATGGTCGAAGCTCTTCAACTTCATCTTTAGAAAAT
AACAACACTACTTTGAAAGAAGACTTCTCGATTCATCGCTCAATGTCTGT
TGACACTCCAAGTTTTATTGGTGCAGCTGGATTGGCAACACCAATGTCGC
CTGAACAACTGACAGGCTTTCTTACCAAGAAGAACAAGGGTGGTAAAAGG
GGAACACTTCCAAAAGTAGCAACAAATGTACTGAAAGCATGGCTGTTCCA
ACACTTAGTTATGCTGAAATCACTTCAAGTCTTGGCTATCCACCTTCTGG
AACTTGGAAAAGTGAATGAATTATGCAAGGACTTTTGTACAAGATACATA
TCGTGCTTAAAAGGAAAGTTGAACAGTGAAAATATTATGAGAACATTAGA
CATTCAAAACACACCACCTGGCTCACCTACTTCTCCTAAGAATCCCACAC
AACCTATGTCAGACGTCACAATGGTTGGATCTACAATTGATGCTTCTATT
CTAGCTCCACCAAAAACACCAACAGCTGTCCCAGTAAATGGTCGAAGCTC
TTCAACTTCATCTTTAGAAAATAACAACACTACTTTGAAAGAAGACTTCT
CGATTCATCGCTCAATGTCTGTTGACACTCCAAGTTTTATTGGTGCAGCT
GGATTGGCAACACCAATGTCGCCTGAACAACTGACAGGCTTTCTTACCAA
GAAGAACAAGGGTGGTAAAAGGGGAACACTTCCAAAAGTAGCAACAAATG
TACTGAAAGCATGGCTGTTCCAACACTTAGTTCATCCCTATCCATCTGAG
GAAGAGAAGAAGCAACTAGCAGTACAAACCAACCTTTCCATATTACAAGT
CAATAATTGCATCCCTATCCATCTGAGGAAGAGAAGAAGCAACTAGCAGT
ACAAACCAACCTTTCCATATTACAAGTCAATAATTGGTTCATCAATGCAC
GTCGTCGTATTATTCAACCCATGCTTGATTCCTCCAGCACTGTCTTGAAG
AACAACAAAAAACCTAAACAACCACGGAACGCAGCTCAAAAGGGCTGGGC
AAGCACCATGGAAGAACTTAGCACAACCAATAGACCTGGCCCTTTAAGTC
CTCCAGCTCAACAACCTGTACGATACATGATGAGTCCTGTCACTTCTTCG
GCACCCGGTCCAGTCTTACTTAACCTTGGAGCACAATCGACAAACCAACC
TTCCACAACACAGTCCATGTTGATGAGTCCGGTACAGTTTGTTCAAGTCA
ACCAGATCCCTTCTATGCAGAGCATACAGGCTGCAACAGGCTACCTACCA
GCTCACACTGCCAGCACACAAACCTCATTCCCCTCTACCACTGCTGCTAA
TTCAGTAGAATCCTCTACTAAGGATGCATGAGTTCATCAATGCACGTCGT
CGTATTATTCAACCCATGCTTGATTCCTCCAGCACTGTCTTGAAGAACAA
CAAAAAACCTAAACAACCACGGAACGCAGCTCAAAAGGGCTGGGCAAGCA
CCATGGAAGAACTTAGCACAACCAATAGACCTGGCCCTTTAAGTCCTCCA
GCTCAACAACCTGTACGATACATGATGAGTCCTGTCACTTCTTCGGCACC
CGGTCCAGTCTTACTTAACCTTGGAGCACAATCGACAAACCAACCTTCCA
CAACACAGTCCATGTTGATGAGTCCGGTACAGTTTGTTCAAGTCAACCAG
ATCCCTTCTATGCAGAGCATACAGGCTGCAACAGGCTACCTACCAGCTCA
CACTGCCAGCACACAAACCTCATTCCCCTCTACCACTGCTGCTAATTCAG
TAGAATCCTCTACTAAGGATGCATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:877044..879270 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 970-1413:445 |
| Aaloc | 892-966:850 |
| Aaloc | 370-891:1554 |
| Aaloc | 1-369:2228 |
|
