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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:594801..600398- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033388 ID=XLOC_033388|Name=XLOC_033388|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5598bp|location=Sequence derived from alignment at sc0000078_pilon:594801..600398- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTCTTGAAAATATTGGATATATTTTATTTTGGTGTTATGGACTATT
GTATTGTATGGTATGTTTTTGGTTTTATAAGTTGCATTCGTTGAGGTAAG
CATGCAACGCGAGGGGTAGTTTACTGATGAGCACTCATGTGTCTATCTTA
TAGATATAAATGGGGGTCGGGACTCAGAGTTTGTAAAACAGGCTTTAGGA
AAAGGGCGAAGGGTTTTATTATTTGGTTTTCATTTTTTGTTCAAGGGATT
TGATAAGATAGACACAGAAGTGTTTCAAAAACAACAAAAACGAAAAAACA
AACATTTTCGGAACATTTGGCAAATGAAAAGTAACATTACCCCTCTCACA
CAATTTGTTTTGGACTTGGAGCTGGATGGAATTGAAATAAATGGGCTTGA
ACTGGAAAGCCTACACACCAAGAATCAAAAGATTTTAAGAGCTTTACAAA
AAAGTTTTTCAGACGTCAGACGTCTATGATTAGCAAATCTTAAAAACCGA
TGTCGGCTATTATTTATCCGACATGAGCCTTTTGTTGGTAAGTATAAAAA
GCTAATAAAAAATGACCACGACATTATGCATAGTGTGAAGGTCACTAAGC
TAACCCACGTTGTCACAAAAGACCATGGTCCCACTGGGAGAAGAATACTA
AATTACAAGTAGGAAGGGGTAAATAGATCCTTTGGCTAAGGGGATTCTCA
TCTTAAACCATGGTCTTATCTCCGCCATTTTTTTAATCATTGGATGACTT
TTACCTTACTTTTTTATCTTTTTAACAGGAAATTTATCAGAAGCATATCA
CGTTTTCAAGTATTTGTATATCGTATGCTGTTGGCGCATCATGTATATTG
ATGATTGCAACAACATTTCTTTATCCAACAAAGGAAGTTCTACAAGCGTT
CATTGATGTTGAGACTGTTAACAACATTCGTCCCCAGCTCTCTGATGATG
AAGATACAGATGATGAAAACCTTGTTGATACAGCATCTTCTCATGTCATG
CGATCTCAAGATTTCGCTTCTAATTCTATTATGTCAAGTTATCAGATGTA
CCATGAAGCAATTCACAAGTAAGCTAGCTAAAACTTTATATCAAATCAAA
TTTGTATGACTCAAAAACTGACGTAACAAGTAAAACCAGTTGACTCCAAA
AATGTGACGGGATTTCCCGAAACCACTTAAAGCCGGTCTCCACTTGCACG
CACTGCGATCGCACTTTTTGGCTTCCATCCATTTTTCTTGGAAAAAAAAT
ACTTCATAAAAATATCACGCGCTCGAAAAATTAACCGTCACGTCAGATTG
CACCAATGGAGTTGCTACATTTTTCTTTTGACCAATAGCGTGGAAGCTTT
GCTCGAAAAAGTGCGATCGCAGCGCGCGCAAGTGGAGACCGGCCTTTATA
CCAATCGGAAGCTCTCAAAATCGATATAGAGGACTTTTAAGTGAATATAG
TCGACTTCCCAATCTCGAGAAAATTTAAGTCAGTTTTGACGTCATTTCCA
TTCGATTTACTCGAGTTACGCTCTAGCTGGCAGTAATGTTTTTTGACAGA
TTTAATTAGTCACCTATATCTTCTTTGTTTAATAAGCATTGTACTAACAT
CTTCTCTTCATTTGGTATAAAACACTTCAACTATTTTTCTTCACTTTTCT
TCAGATCGCTTGAACAGATAAAGGAAGCTGAGCGCCGTGAAACATTGTTA
GCCAGTCTATCTGAAAATCTGGCTATACAGTTTTCCAATAGAAGTTACGA
TGCAAACGATCACAAGATACAGTATTTACCGTAAGTATAGACCTTTTCAT
AAATTACGTCACGAATATCACTTGCCTCGTTTTGAAATCATGACCATGGT
GATTAACTCCCAGCAGATTTTATTAAAACTACCTCCTATTCATAAAAGAA
TCGTTTAATGTCTCAAGGGACATAATCACCATGGTAATTGTTTGAATACG
AGGCAAGTGATGTTCATGACGTAATTTATGAAAAGGTCTATTCGGGATAA
TTCTTATCAAGTGCCGGATCTAAAGAGAGGTTCAAAATTTATAGCGGTGA
GTGCTTTTGTAAGGGCTATAATCCTTATCCCTAATAAGGAAAAAGTCTTT
GTGATAGACTTTGAACCCCCTCAAATCTGCCACTGTCATCAGTAGAACTA
ACCCACGATCCTAGTTTAACGTTCACATAACGTCAAGGACGCAATCTATG
GAACTGTTTTCACTTTCCGTCGGCTGTAAATCTTACTGAAGAAACCTGTC
AATCAGATTGAAATGGCTTATTGGTCCAAGTTGCGTTATTTCAGAAATGT
CACCCAGATTAGGGTCTTTTTAAGTATGATAGATTTTGCCTAATTATGGT
TTTTTTATTGATTATTTGACATATTTCCTACTAGGAGCCGACCGTACGGT
ACGATTATGGAAGGGTCTGTTGGCTATCAACAAGATTCTTATTCTGCGTC
ATCACACCTTGTATTCAACATAAAAAACAATAAGGAGGACGAAAAGACGC
TCCTGTTACCAATTCAACCTACCAGGGAAGAGCACCTGACCCCCTACTCA
GGTAAAAGCTGTTTTTCTTTCAGCGTTTATCTTAAATACACGTTTTTTTT
ATAAGAACAAACTATATAAGAACATAAGGCTTCGATGGCCAAATTCTTAA
GAACAAGTCAAGAACATTTTAAGCTTTCGTGGGCTCTAGAACACCCAATT
TTTTTGGAAAATGGTCAAAAATACTAAAAAAATAGCGAAAATAAGAACAT
GTTTAGAACATTTTTAGGCCTGAAAGTAAAAAGTTTAAGAACATCCGAAG
GTTTCAAAAACTTTTGATGTTCTTATGAAAAAAAAACGTGTACCATTAGT
TTGGCTGACGTTTTAGTAGCTTAACTCAAGCTAATCTACACTAAATGAAG
ATTTTTATTTGGATAGAAATCTTTTTTCAACTATCTTTTTAGGTATTTAC
TTGAATTTGTTTCATTGATATGATTCTCAAGTTTCGGCTAGATGAATTGT
GAATTTTATGGCTGACTTTTTTCATTTTTCTGTATTTGAAGGACATAAAC
TACGGCAATACATCTTTTCGAAGTTGATGATCTTTGGCACATACACAGCT
AGTGTGATGATGTTCAAGATTGTTTATTTCATCGGAAATTTGGACAAATA
TCTTAACAAATTGACCGATACTGAGACAGGTAACCTTTGTTTCACTAATT
TATAGGATACATGTTTTTCCTTTTATAAACTCAATCGGCTTGTTCCTAAT
TTTGTCAGCTTGTTAAAGTATATACACTTTGATTTAATTATTTCCATCTT
TTAGAATGCTAATCTACTACTGTAATATCGCTTAAAAAAACAATTTCTTC
GAGAGACTTTTTTGTCTAACACAGTCCATACCCTGACCCTACTGCATAAA
AAGACGTATGACTACAAAAATATTACCTTCGCTTGAGCCCCTTAGCAATA
AATAAAATTACTAGAGTTTGTAAGCTTCGTCGCGAACCAACATTATCCAA
TAAGACTCGTAACTCACAACCATAGGGCATAGCATTGGCGGACAATAGCT
TTTACCCCCCGGACAAGCATCTGCTGACCCCCCGGACACCCCAAATTACC
CCCGGACAAGGCAAATTTTGATGATTTTTTGCTACCCCCCGGACAAAATA
TCCTCCACCCCCCATGTACAATTTTTTTCTGGAAGAGCCCAATAGTAATT
CATGTGTTTTCCCACTCTCTCATAGCAACTTTGTATATCAAATATTTTGG
ATATGTTCAGTTCGGTGGAATTATCGCTGCACCGATCTGCAGTATGTTAT
TTCGTGAGAATGTGGGAACCGAAAGATTATCTGCTCATCAAGATTTCGTT
AAAAAAGTCAAAATTTTAATCCTTCCTGGTTTTCTTCTCATCTTGTTCAT
CGTGCTTATCGATGTCTTACAACTCGTTCAAAACATTTATCTATCGGTAA
GCTGTTACAACTTTTTTATAAAAACTATTTGGGGGGAGGGGTACTACCTT
GCCGACCGACGGTGTGTCCGCTGAAGTTAAAAAAATGGACCCTACATTGG
ACTCGTTTTTTTTTACATTTTGCCAAAGTTTTCGAAAAAGTGCCCTTGAA
TGGGATTAAAATTTCGACCATACTTGGGACTCATTGAGGTGAAAAAGGTA
TCCTGACCAGTACATCCCCGTACCCCTTTTTGCCCAAGTACCCCCGGGGA
ACTATTTCTTATAATTCAGTCAAAACTTATAAACAAATCATAGACAATTG
AACCCTTCATAACTTCATAGACCTTAAGTGTGAAGAAACTAAGCATAAGT
CACTTTTTCGAAAGAGATCCTTGACATTAGGGGTATGTTTTCCATTTAAA
AACTTCAATTTTCCTGTTATCGATAACTATTCCTAGATTCTTCAAGTGAA
ATAAACTTCTTTTTTTCAGGTTCCAATTTTCATTCTGTTTTTGTTTGGGA
ACAGTTTGGTGTGGTGTTTCACTTCATTGTACTTCGCATATCTGTAAGTA
GTTCCCCTTTGAATTACAGTGGAGTTTTCATAACTCAAACTTTTATAACT
CGAAAGACTCCTTAACTCGAACAATGCCTTATAAACTAAGCTCCGTAACT
CGAACTTCCTTAACTTGACAAAAATTGTATTCCTTGTGCGTATTCGAGTT
ACGAAAACTTCACTAGGTTTCAATCCTGTTAGAAGTTGCCTCGGAAGTAA
ACCCACCTAAAACACATCCCAAACCAGCTGTCACTCCCTCCAGGACCTAA
TAAACTAGAGAAATCAGTCTTTAAAACCACTGTAAAACACCAAAGACCCT
TAAAAAGGTACATTGATTGACGGTTATTATATTGTAACGCTTTTTTCTTC
GTATTTCAGGTTTCCGGCCAAGTACTACTGCACCTTGTATGGCATCGCAA
CGGGAGTATCTGGAGCTGTCTCTTTCCTTCAATATCCGCTTCTTTCTCTT
GAAAATTCTCTTTTCCACGGAGAACAATTCTATGTAAGTCTTCAAAACCA
AAAACTCGAACCCAGTCCCTTAGTTTTCTTTTCATGACTCCAAAAGTTTC
ATATCAAGTCCATCAATAAAATCAAAAAAAAGTTTTACCCTAATAATCGT
CTACTATATTGAAATATTAACAAAGGGCAATTCTTTTTGAGGAAAATCTC
AACCCTTAGTTTAGAATATAAATGCTAAGGTGAATGTATGTAACTTTGGT
AAAATCCAATGGGAGGATATTAAGGGAAGCATCCAGTATTAATTGATTTT
GGCATAACAATGAAAACTTTATAATAATTACAGTTAACTCTCGCTAATTC
GAACTCGATCCTCAACTCTAATTTATTCGAATTCAAGAGAGATTCGAATT
ATAGAGAGTAAGTTTCTCCTTGACGGTAACTGACAAAAAGTTCGAATTAT
AGAAAGATTTCGAATATAGAAGTTCGAATTGGCGAGAGTCTATTGTAGTT
TTAAAAGCATATATAATTTTTCTTCTCTATATAGACGAATCTTCTCATGT
TGGGATTACTTATATCAACACTGGTGCTTCCATTCTACTTGGTGTATTTC
TACAAAAAATTGAAAATGGCGGAAATTGAAACTCAAGAAAAACCTTGA Coding sequence (CDS) from alignment at sc0000078_pilon:594801..600398- >XLOC_033388 ID=XLOC_033388|Name=XLOC_033388|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2628bp|location=Sequence derived from alignment at sc0000078_pilon:594801..600398- (Clytia hemisphaerica_ch_hm2_pilon)
ATGATTCTTGAAAATATTGGATATATTTTATTTTGGTGTTATGGACTATT
GTATTGTATGATGATTCTTGAAAATATTGGATATATTTTATTTTGGTGTT
ATGGACTATTGTATTGTATGGAAATTTATCAGAAGCATATCACGTTTTCA
AGTATTTGTATATCGTATGCTGTTGGCGCATCATGTATATTGATGATTGC
AACAACATTTCTTTATCCAACAAAGGAAGTTCTACAAGCGTTCATTGATG
TTGAGACTGTTAACAACATTCGTCCCCAGCTCTCTGATGATGAAGATACA
GATGATGAAAACCTTGTTGATACAGCATCTTCTCATGTCATGCGATCTCA
AGATTTCGCTTCTAATTCTATTATGTCAAGTTATCAGATGTACCATGAAG
CAATTCACAAGAAATTTATCAGAAGCATATCACGTTTTCAAGTATTTGTA
TATCGTATGCTGTTGGCGCATCATGTATATTGATGATTGCAACAACATTT
CTTTATCCAACAAAGGAAGTTCTACAAGCGTTCATTGATGTTGAGACTGT
TAACAACATTCGTCCCCAGCTCTCTGATGATGAAGATACAGATGATGAAA
ACCTTGTTGATACAGCATCTTCTCATGTCATGCGATCTCAAGATTTCGCT
TCTAATTCTATTATGTCAAGTTATCAGATGTACCATGAAGCAATTCACAA
ATCGCTTGAACAGATAAAGGAAGCTGAGCGCCGTGAAACATTGTTAGCCA
GTCTATCTGAAAATCTGGCTATACAGTTTTCCAATAGAAGTTACGATGCA
AACGATCACAAGATACAGTATTTACCATCGCTTGAACAGATAAAGGAAGC
TGAGCGCCGTGAAACATTGTTAGCCAGTCTATCTGAAAATCTGGCTATAC
AGTTTTCCAATAGAAGTTACGATGCAAACGATCACAAGATACAGTATTTA
CCGAGCCGACCGTACGGTACGATTATGGAAGGGTCTGTTGGCTATCAACA
AGATTCTTATTCTGCGTCATCACACCTTGTATTCAACATAAAAAACAATA
AGGAGGACGAAAAGACGCTCCTGTTACCAATTCAACCTACCAGGGAAGAG
CACCTGACCCCCTACTCAGGAGCCGACCGTACGGTACGATTATGGAAGGG
TCTGTTGGCTATCAACAAGATTCTTATTCTGCGTCATCACACCTTGTATT
CAACATAAAAAACAATAAGGAGGACGAAAAGACGCTCCTGTTACCAATTC
AACCTACCAGGGAAGAGCACCTGACCCCCTACTCAGGACATAAACTACGG
CAATACATCTTTTCGAAGTTGATGATCTTTGGCACATACACAGCTAGTGT
GATGATGTTCAAGATTGTTTATTTCATCGGAAATTTGGACAAATATCTTA
ACAAATTGACCGATACTGAGACAGGACATAAACTACGGCAATACATCTTT
TCGAAGTTGATGATCTTTGGCACATACACAGCTAGTGTGATGATGTTCAA
GATTGTTTATTTCATCGGAAATTTGGACAAATATCTTAACAAATTGACCG
ATACTGAGACAGCAACTTTGTATATCAAATATTTTGGATATGTTCAGTTC
GGTGGAATTATCGCTGCACCGATCTGCAGTATGTTATTTCGTGAGAATGT
GGGAACCGAAAGATTATCTGCTCATCAAGATTTCGTTAAAAAAGTCAAAA
TTTTAATCCTTCCTGGTTTTCTTCTCATCTTGTTCATCGTGCTTATCGAT
GTCTTACAACTCGTTCAAAACATTTATCTATCGCAACTTTGTATATCAAA
TATTTTGGATATGTTCAGTTCGGTGGAATTATCGCTGCACCGATCTGCAG
TATGTTATTTCGTGAGAATGTGGGAACCGAAAGATTATCTGCTCATCAAG
ATTTCGTTAAAAAAGTCAAAATTTTAATCCTTCCTGGTTTTCTTCTCATC
TTGTTCATCGTGCTTATCGATGTCTTACAACTCGTTCAAAACATTTATCT
ATCGGTTCCAATTTTCATTCTGTTTTTGTTTGGGAACAGTTTGGTGTGGT
GTTTCACTTCATTGTACTTCGCATATCTGTTCCAATTTTCATTCTGTTTT
TGTTTGGGAACAGTTTGGTGTGGTGTTTCACTTCATTGTACTTCGCATAT
CTGTTTCCGGCCAAGTACTACTGCACCTTGTATGGCATCGCAACGGGAGT
ATCTGGAGCTGTCTCTTTCCTTCAATATCCGCTTCTTTCTCTTGAAAATT
CTCTTTTCCACGGAGAACAATTCTATGTTTCCGGCCAAGTACTACTGCAC
CTTGTATGGCATCGCAACGGGAGTATCTGGAGCTGTCTCTTTCCTTCAAT
ATCCGCTTCTTTCTCTTGAAAATTCTCTTTTCCACGGAGAACAATTCTAT
ACGAATCTTCTCATGTTGGGATTACTTATATCAACACTGGTGCTTCCATT
CTACTTGGTGTATTTCTACAAAAAATTGAAAATGGCGGAAATTGAAACTC
AAGAAAAACCTTGAACGAATCTTCTCATGTTGGGATTACTTATATCAACA
CTGGTGCTTCCATTCTACTTGGTGTATTTCTACAAAAAATTGAAAATGGC
GGAAATTGAAACTCAAGAAAAACCTTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:594801..600398 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1201-1314:115 |
| Aaloc | 1078-1200:739 |
| Aaloc | 1003-1074:1180 |
| Aaloc | 784-1002:1872 |
| Aaloc | 646-780:2556 |
| Aaloc | 478-642:3214 |
| Aaloc | 352-474:3944 |
| Aaloc | 61-348:4821 |
| Aaloc | 1-60:5599 |
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