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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:552343..556321- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033386 ID=XLOC_033386|Name=XLOC_033386|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3979bp|location=Sequence derived from alignment at sc0000078_pilon:552343..556321- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGACTACTCCTTGGAATAAATATTGTGCTGACGACAGCAATCTTTGT
TGATGCTTATACGCAATACACAGTCGAGAAAATGAAAAACAAATGCATCA
AAGTGACTTCCAAAGGATCCAAATGTCTGAATTCGTTGAATGGAAATGTC
ATATGTATGGTAGAATTGACTGGGTCAAGAAAAGTTCTTCAAAAATGTGA
GAATAAACCTATCAGGACTATTACGATCATTTGTTGTCCAGAAGGTGTAT
ATTATCAACCTACAGTGTCGACGGTAGAACAACGAACAACCGAGGTAACC
GCAACAACAAAACATATGACAAAAACGACTTCAATGTCCATAATAAAACA
TTCTGAGAAAGATTTTACTAAAAAGGCGAAAACCACTACAATATACCAAA
CTCTGAATAAAAAATCTACAGCTTCAAGGCCTACGATTGGCTCTGCGACG
CCATTAACAACGACTGTTTTGAATAAAACTTCAACTGAGGCAACTATCTC
AAATAAACAAGAGCTCAACCCTGAAACGACAGTAGCAACCCAATCATGCA
ATTTGCAACAAGCTTTAAAGGAATTTAGAAGCAAGATGCCTTTGAAACAA
AACAAATGCAAAGACTTCAAGTCTTACAAGCAAGAGCTGGATGGTTTATG
GAGCATGCATGATGCGAATTTAGACATTATCAAAAATCAGATGAGAGATG
AAAAGAAAAGAATTGATGCATTGATTGCAAAGAACAAAATCTACAAAGTT
GATCTGAAGAAAATGAACCGTAAGTGAAACAATGAATTTAAGTCCTGTTC
AAAATCCTTTTCAATCAAATTTTAATATGGGTGGGGGTGGGGGCATACAG
TCAACTCTCGAATTAGAGATATGTAACCATAGGTCAAAAGCACATGAAAA
GTATACAACATATACCCCAAGTATTCGAATTTGTCTTATTTGTTTAGAGA
ATTGCTAACGATTTTAAGTTAAGGGTGGGTCAAAAGGAAAAAGGGAAATA
GAGGAAAAATCACATAACAAGATGTTTGAGAATCTGACTACATTATTTAG
TAGCGTGGACAGTAGGGGCGCAAAATTTGTGTAGGAAAGCAGATTTTTAT
GACAAAGCAATCATATTTTTATATCATGAATATATCATTACTTTGTCATA
AAAATCTGCTCTCCTACACAGATTTTGCACTCTTCTTATCTACGCTACTG
AATTCCTTGATTTTTCAGGTTCCTTAGAGATTTGGAAAGCATCGTTAAAA
GCATTCGAGGAAGAACACTACCATGGATTAGTGAGAATCAGTTCAAAGTA
TCATAACTGCATTTTCATCAAACTCATGATCCAAAAACGTGATATTATGA
TGAAATTCATTGATTGGGTACAAAGTTCATCAGATCCTGATATGACAATC
GTTTACATGATTGCCAAAGATCTCCAGAGCTTCGAAGATGATTATAAACA
ACAACAGGCAAGGATTTTCAAGCATTTTGAGTTTTTGTCACCAAAATTAC
GAAGAGTAGCTTTGAGGCAGTTGGAGAATCACCATATCGCATTGGAGAGT
GTTCAATTGGCAAAATGTGTCGATAGTCAACAACATACAGGATTTAGTGG
ACCAAAAGGTGTAGCTTTGGCAGATGTCTTGTCGAAACTGGTAAGATGTT
TTCTTTGTCCCATTCTTTACAGTTTATAGATATCTTTATACTCAGTTGGT
ATATTACGTTAACTTAACGTCCATGTAACGCTATATATAACACACAAAAG
CGATAATACAAATTTTTTTTTTGCTACTACAGAATGCAACCAAAGAATCT
GACAAACACCAACACGAAGACATACAGAATGAATTGGAAAATTTCTTAGT
GAGTGTTCTCATATATTTGATCCGTAGGATTGGGAAAAAGGTTATTTCAC
AGTTAAAATATTAATTAATAAACATGAGATATGTGTCATGTTTTTTTATC
TATTAAAGAATTTGAAGGAAGAGATCAAATTTGGGTAATTTATATTAGAC
CATGAATGGGTTCTTGTATATTGCTTTTGGGACATTTAATTTTAATTTCA
AACTATTCTAATTTCAGTCCAGCGAAAAGCTAAAATGGATCAAAGCTTCG
ATTGAAACAGACGAGGCAATGACATCATCAGTTGCATCAGGTGAAGATTC
AAATAGTCATTCAAACGGAAGTGGCGGTGGCGAATATAGCGGAGATAATA
GTGATACTGAATCTTCGGGAGATAATAAAGAAGGAAGTGGGGATGTTATG
GTGGAAAATAATGACGATGAAGATGCTATGAGACATGTTTCGAAACCGAC
ACAAACAACCTCGAGACCAAGAAATACAAGGTATATAAATTAATATTGTA
CATTGGTAGTGCGGAGGTTTCGTTCACAGAATTGCAAATGACTGTGTTCA
AATCCCAAGGGAAGTATGACGCTAGACATTCTCCTTTCACTGATAAGGTA
AAAATAAAATTTTCTAGAATACACAAGACATTTTTCTCACATTCGTAGAG
TTCCACAACGTCTATTGACATGGTTTGTTGCATAACAAAGCTTTTGTGAA
CTGATTTTTACACCGTCTACAAAAGACCAATACTTTAGGATCTTTAAAAA
TATCGAAAAATATTTAACTTTTCAAATTTAGACCTCCAGATATTAAAAAG
AGTCAAAAATCAAAAATGACGACAACCGAGAAATATCGACCGAGACTTTT
ACCGACAACCGACGTACCAAGTCAAGAGAATCGGTTAGAACTCGCCATCA
AACGATTATTAAACGAATATCCGAGCGAAAAGAATGGTTGTGACGAGAAA
ACAATCGATAGGAGTGAGGAAGAATCAAGAATGGCTTTTTCAAGCGAAAC
AGCTCTTGTTGTCCAGAGATGGGATGAAGCACAAAAGAAATATTCAAAAA
TGAAATTAAACGATTATCGAAAAGCTGAACGATTTTTATTGAGTAGGTTC
AGAAGAGATTACAAAGTTATTAAATATTTGAATTTGGAATTCTCACTTTT
GCAATAAGTTCCGCACAGCAATTAAAAACGAGAACAATGTCCTTTTCATG
AGTAGTTTACTAAGGAAACTGATTCTTTATTAAACGTCAATTACCATACT
TACGTCTAACTGTCCAAGTCCAATCTGATTGGTTGAATGTCAAAATTATA
ATATAATTGAGTCAATCAGTGCTCAGAAAAGCGTTTGATTGTAGAGCGTA
CTTTTGGATAATTAGCCCATAATTAGCCGTAAGTACAAATCTTTTTCAGA
AAAAATTTGAATATGAGGGGTGGAGGATATAACATTTTTTAGAGATTTAC
CCCCGGACATTGTGAAATTTGACTCCCCGGACAGGGTAAATTTTGTAGAT
TTTCACCACCCCACGGACACTATATCCTCCTCCCCACGGACACTATATCC
TCCTCCCCCCATGTACGGACCTCCTCCCCCCATGTACGAACATTTTCTGG
CCCAATGTGTCTAAAAATCCCTTCCATCTACTCAAAAACAAAACTTGGGA
AATTCTAGTCAATGGCTTTAAATTGTTCTTATCTTCTTTTTGTAGAAGCA
TTAGGGGCTGTTACAAAATCCATGAACAATTTGAAACGAAGCGAACAAAC
AAGCGATGAAGAGAACAGAAGAAACCGAGCGGAGTGCATCAATAGACAAA
TTTTGAAAGACCAACGTGACGCGTTAGTGGATTACACTATCGAGATCCAA
AAACCGAAACTGAGTTTAACAAAAATCGTTAAGCAATTGAAACGTTTTAT
CGACGTTTGTCATCACCTGCATGTATATAAACTCCAACATGGCAAGCGAG
GCGAAGAATATACTGTACGCTATAAAATGAAGCAACATATTAAAGATTTA
AATGTGAACATTAAGAAGATGTTGAAATTACTTGAATATTTACCTAAAAC
TGAAGTGGTTGCTAAAATCAAGCGTGAAGTTTGGTTGAAGCAAATCAACT
TTACATTCAAAACGATACAATCTCTGTGA Coding sequence (CDS) from alignment at sc0000078_pilon:552343..556321- >XLOC_033386 ID=XLOC_033386|Name=XLOC_033386|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4530bp|location=Sequence derived from alignment at sc0000078_pilon:552343..556321- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGACTACTCCTTGGAATAAATATTGTGCTGACGACAGCAATCTTTGT
TGATGCTTATACGCAATACACAGTCGAGAAAATGAAAAACAAATGCATCA
AAGTGACTTCCAAAGGATCCAAATGTCTGAATTCGTTGAATGGAAATGTC
ATATGTATGGTAGAATTGACTGGGTCAAGAAAAGTTCTTCAAAAATGTGA
GAATAAACCTATCAGGACTATTACGATCATTTGTTGTCCAGAAGGTGTAT
ATTATCAACCTACAGTGTCGACGGTAGAACAACGAACAACCGAGGTAACC
GCAACAACAAAACATATGACAAAAACGACTTCAATGTCCATAATAAAACA
TTCTGAGAAAGATTTTACTAAAAAGGCGAAAACCACTACAATATACCAAA
CTCTGAATAAAAAATCTACAGCTTCAAGGCCTACGATTGGCTCTGCGACG
CCATTAACAACGACTGTTTTGAATAAAACTTCAACTGAGGCAACTATCTC
AAATAAACAAGAGCTCAACCCTGAAACGACAGTAGCAACCCAATCATGCA
ATTTGCAACAAGCTTTAAAGGAATTTAGAAGCAAGATGCCTTTGAAACAA
AACAAATGCAAAGACTTCAAGTCTTACAAGCAAGAGCTGGATGGTTTATG
GAGCATGCATGATGCGAATTTAGACATTATCAAAAATCAGATGAGAGATG
AAAAGAAAAGAATTGATGCATTGATTGCAAAGAACAAAATCTACAAAGTT
GATCTGAAGAAAATGAACCATGAGACTACTCCTTGGAATAAATATTGTGC
TGACGACAGCAATCTTTGTTGATGCTTATACGCAATACACAGTCGAGAAA
ATGAAAAACAAATGCATCAAAGTGACTTCCAAAGGATCCAAATGTCTGAA
TTCGTTGAATGGAAATGTCATATGTATGGTAGAATTGACTGGGTCAAGAA
AAGTTCTTCAAAAATGTGAGAATAAACCTATCAGGACTATTACGATCATT
TGTTGTCCAGAAGGTGTATATTATCAACCTACAGTGTCGACGGTAGAACA
ACGAACAACCGAGGTAACCGCAACAACAAAACATATGACAAAAACGACTT
CAATGTCCATAATAAAACATTCTGAGAAAGATTTTACTAAAAAGGCGAAA
ACCACTACAATATACCAAACTCTGAATAAAAAATCTACAGCTTCAAGGCC
TACGATTGGCTCTGCGACGCCATTAACAACGACTGTTTTGAATAAAACTT
CAACTGAGGCAACTATCTCAAATAAACAAGAGCTCAACCCTGAAACGACA
GTAGCAACCCAATCATGCAATTTGCAACAAGCTTTAAAGGAATTTAGAAG
CAAGATGCCTTTGAAACAAAACAAATGCAAAGACTTCAAGTCTTACAAGC
AAGAGCTGGATGGTTTATGGAGCATGCATGATGCGAATTTAGACATTATC
AAAAATCAGATGAGAGATGAAAAGAAAAGAATTGATGCATTGATTGCAAA
GAACAAAATCTACAAAGTTGATCTGAAGAAAATGAACCGTTCCTTAGAGA
TTTGGAAAGCATCGTTAAAAGCATTCGAGGAAGAACACTACCATGGATTA
GTGAGAATCAGTTCAAAGTATCATAACTGCATTTTCATCAAACTCATGAT
CCAAAAACGTGATATTATGATGAAATTCATTGATTGGGTACAAAGTTCAT
CAGATCCTGATATGACAATCGTTTACATGATTGCCAAAGATCTCCAGAGC
TTCGAAGATGATTATAAACAACAACAGGCAAGGATTTTCAAGCATTTTGA
GTTTTTGTCACCAAAATTACGAAGAGTAGCTTTGAGGCAGTTGGAGAATC
ACCATATCGCATTGGAGAGTGTTCAATTGGCAAAATGTGTCGATAGTCAA
CAACATACAGGATTTAGTGGACCAAAAGGTGTAGCTTTGGCAGATGTCTT
GTCGAAACTGGTTCCTTAGAGATTTGGAAAGCATCGTTAAAAGCATTCGA
GGAAGAACACTACCATGGATTAGTGAGAATCAGTTCAAAGTATCATAACT
GCATTTTCATCAAACTCATGATCCAAAAACGTGATATTATGATGAAATTC
ATTGATTGGGTACAAAGTTCATCAGATCCTGATATGACAATCGTTTACAT
GATTGCCAAAGATCTCCAGAGCTTCGAAGATGATTATAAACAACAACAGG
CAAGGATTTTCAAGCATTTTGAGTTTTTGTCACCAAAATTACGAAGAGTA
GCTTTGAGGCAGTTGGAGAATCACCATATCGCATTGGAGAGTGTTCAATT
GGCAAAATGTGTCGATAGTCAACAACATACAGGATTTAGTGGACCAAAAG
GTGTAGCTTTGGCAGATGTCTTGTCGAAACTGAATGCAACCAAAGAATCT
GACAAACACCAACACGAAGACATACAGAATGAATTGGAAAATTTCTTAAA
TGCAACCAAAGAATCTGACAAACACCAACACGAAGACATACAGAATGAAT
TGGAAAATTTCTTATCCAGCGAAAAGCTAAAATGGATCAAAGCTTCGATT
GAAACAGACGAGGCAATGACATCATCAGTTGCATCAGGTGAAGATTCAAA
TAGTCATTCAAACGGAAGTGGCGGTGGCGAATATAGCGGAGATAATAGTG
ATACTGAATCTTCGGGAGATAATAAAGAAGGAAGTGGGGATGTTATGGTG
GAAAATAATGACGATGAAGATGCTATGAGACATGTTTCGAAACCGACACA
AACAACCTCGAGACCAAGAAATACAAGTCCAGCGAAAAGCTAAAATGGAT
CAAAGCTTCGATTGAAACAGACGAGGCAATGACATCATCAGTTGCATCAG
GTGAAGATTCAAATAGTCATTCAAACGGAAGTGGCGGTGGCGAATATAGC
GGAGATAATAGTGATACTGAATCTTCGGGAGATAATAAAGAAGGAAGTGG
GGATGTTATGGTGGAAAATAATGACGATGAAGATGCTATGAGACATGTTT
CGAAACCGACACAAACAACCTCGAGACCAAGAAATACAAGACCTCCAGAT
ATTAAAAAGAGTCAAAAATCAAAAATGACGACAACCGAGAAATATCGACC
GAGACTTTTACCGACAACCGACGTACCAAGTCAAGAGAATCGGTTAGAAC
TCGCCATCAAACGATTATTAAACGAATATCCGAGCGAAAAGAATGGTTGT
GACGAGAAAACAATCGATAGGAGTGAGGAAGAATCAAGAATGGCTTTTTC
AAGCGAAACAGCTCTTGTTGTCCAGAGATGGGATGAAGCACAAAAGAAAT
ATTCAAAAATGAAATTAAACGATTATCGAAAAGCTGAACGATTTTTATTG
AACCTCCAGATATTAAAAAGAGTCAAAAATCAAAAATGACGACAACCGAG
AAATATCGACCGAGACTTTTACCGACAACCGACGTACCAAGTCAAGAGAA
TCGGTTAGAACTCGCCATCAAACGATTATTAAACGAATATCCGAGCGAAA
AGAATGGTTGTGACGAGAAAACAATCGATAGGAGTGAGGAAGAATCAAGA
ATGGCTTTTTCAAGCGAAACAGCTCTTGTTGTCCAGAGATGGGATGAAGC
ACAAAAGAAATATTCAAAAATGAAATTAAACGATTATCGAAAAGCTGAAC
GATTTTTATTGAAAGCATTAGGGGCTGTTACAAAATCCATGAACAATTTG
AAACGAAGCGAACAAACAAGCGATGAAGAGAACAGAAGAAACCGAGCGGA
GTGCATCAATAGACAAATTTTGAAAGACCAACGTGACGCGTTAGTGGATT
ACACTATCGAGATCCAAAAACCGAAACTGAGTTTAACAAAAATCGTTAAG
CAATTGAAACGTTTTATCGACGTTTGTCATCACCTGCATGTATATAAACT
CCAACATGGCAAGCGAGGCGAAGAATATACTGTACGCTATAAAATGAAGC
AACATATTAAAGATTTAAATGTGAACATTAAGAAGATGTTGAAATTACTT
GAATATTTACCTAAAACTGAAGTGGTTGCTAAAATCAAGCGTGAAGTTTG
GTTGAAGCAAATCAACTTTACATTCAAAACGATACAATCTCTGTGAAAGC
ATTAGGGGCTGTTACAAAATCCATGAACAATTTGAAACGAAGCGAACAAA
CAAGCGATGAAGAGAACAGAAGAAACCGAGCGGAGTGCATCAATAGACAA
ATTTTGAAAGACCAACGTGACGCGTTAGTGGATTACACTATCGAGATCCA
AAAACCGAAACTGAGTTTAACAAAAATCGTTAAGCAATTGAAACGTTTTA
TCGACGTTTGTCATCACCTGCATGTATATAAACTCCAACATGGCAAGCGA
GGCGAAGAATATACTGTACGCTATAAAATGAAGCAACATATTAAAGATTT
AAATGTGAACATTAAGAAGATGTTGAAATTACTTGAATATTTACCTAAAA
CTGAAGTGGTTGCTAAAATCAAGCGTGAAGTTTGGTTGAAGCAAATCAAC
TTTACATTCAAAACGATACAATCTCTGTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:552343..556321 - |
Properties
| Property Name | Value |
|---|
| Aaloc | 1834-2265:433 |
| Aaloc | 1522-1830:1348 |
| Aaloc | 1258-1518:1913 |
| Aaloc | 1192-1257:2198 |
| Aaloc | 772-1191:2760 |
| Aaloc | 1-768:3980 |
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