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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:871427..874606+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033380 ID=XLOC_033380|Name=XLOC_033380|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3180bp|location=Sequence derived from alignment at sc0000078_pilon:871427..874606+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAAAACTTACGGCAGACGACATACGATGACGATTTCGACATGTT
TGGAGAGGTTGTGAACGACGTGgctcaaagaaaacaaaacgaAGAAAACT
TCTTCAATGTTGAAACTAAACCAAACACTCCTCCAACAACAAATCTACTT
ATGGAAGTTAATTCAAGCGAAAGCCCAGCTGTATCAAGGCAAAGCGTATA
TCTTGACGGCACTTTGACGCCAAGTGCCGCCAGAGCTCGAACAGGGTCCT
CAAGATCCGCCTCGAACTTATCCATGGACGGCTTTGAAGGAATAGAGACA
GAACGAGAACACAATTTTTCGTATGATATCAGAGACTCGTTTGATGATAT
TGAAGTTCAAAGCAGACTAAGTCGTCGAACAGATTCGGATCCTGTAGTTG
AGCGGTTTTATAACGATTCGATTATTGAAGAAACAGTAGGAGAAAAATCC
ATGGAAAAGAGGCTATCAACACCAGATGCAGTTATAAGCCGGCGGAATAC
TCCAAGTAATGAGACAATCGAGCATACAGAAAATAACCACGACAGAGAAA
TTGCAACTccaacttctgaatacagtccAAGGAATAATTTCGACGAACCC
CATAACAAAGATACGCTCGCCATCAACAAAGGAGATTATATTTCAGTGGA
AATAAAGAAGAGTGAAACACCATCATTACAAGAGAAATCTGATAGCCCCA
GAAATGATTATGACAACATTGAGAATAATGAAAAAGACAATAAATTGAAT
CGGTCTTCATCAGTTGAAAGCCCGAGAGAAAATGTAGATAAAGCCGAGGA
CACTACGAGCGACAATAATGATGATAACGACCATGAAACCGAAAAAGAGT
CCGAGAGTCACGAGCAAACCTATGAAAGCCCGAGAGAAAATGTAGATAAA
GGCGAAGAAACTATGAGCGACAATAATGATAACGACGATGAAACCGAAAA
CAAGTCCGAGAGCCACGAGCAATCTTATGATAAAACAGACCAGAGTGATT
TCAAAAGCATACTCCATTACAAAGATTCTCTCGaagctgaaaatgaaaaa
tcaactgAGAAGAAGACCGAGAATTCCACCGATAAGGACTATGAACAAAA
CGATAATCAAACTGAGGAGCGAGAAATATTGGAGGATGAAAACGAGAGTT
TGACCGAAAACGAGGGTGCAGACGAAGACGAAAATATCGAATCAGAAACC
ACTCCTAGAGATGAGGACTCTCGGGAAAAGGAAGACGATAATACCGAACG
AGGAGAAATTTATCGAAACATCAAGGAAGTAAACAATGATTTTAACGAAg
tcaaaaaagggaaaattaaattatctagtggaaaagaaatcaacgaaaaa
tTCGAAGAGGGAGATTCAGGGAACGAGTCTAATGCTTCAAAAGAGAGTTC
CATTGCTATGACGACCgaagaaaacaaattaataaaaaatgaagatggtg
aaaatgagcagtcgaaaagtgaaaaCTTAGTGAATGGTATACCCCaggag
aaaaaagagaaaaataatgatGATTTGGATGAAGATAAGGAGGGTTCAGA
AGGGAAACCCGAAAAATTGACTCTGTTGGAAGATATGATgagagatttac
agagagaaattgatgaggaaaaagaagagcctcaaaagaaaaagaaaact
gtGATTTTCAAGAGGGACGGTGATACGTATGATGAAAAAGGAGATCGAAG
ATATGATATGAGTGCCCTGGAGATGGTCAGTGAGGATGAAAATGAATTCG
TTAATCTTCAGGAAGTACAACAAGCTCGGATCGAGTTAAATGATTATGCA
AAGGACCTTGATAATTTCAATCATATCATCAATGAGTTAGAGAAAACACC
TGAAGAGAAAAGAATGGAATCAAATCGAAGTTTGACATTCGATTTGGGTG
ACTTGGGAATCGATGATTTTGAAGATGAGGAAAGAGAAGGTAGTACTAAT
CGgaaaacaccgaaaaaagcgaaaaagataaagaaaaagaagaagaaaac
tgATGTTGTTTACAGCAAAGTCTGCCAAAAATGTCGAAATCCAATCTTCA
AGAAAGATTCGTATTTAGAactgaatgaaattttcagtgaCAGTGTTTTA
TGTAAAAAATGTTTGGCTGGTAAATCGAATAATAAAGGAAAAGAGAAGAA
GATTGAGAAGTCACCGAAACATGATATTGGGCGGATTAAAGCCGAAGTTA
AGCCAGCTTTAGATTCTCGACTGGAGAAAAGTGAAAATACTGCATTACAG
AAATGGTTGGAGAAAAAGAGTAAAGAGGAACGAGTGAGAAAAAGGCAAGA
GCGGAGAgaacggaaagctaaagctaaagaaataaaacagaagaaacgcg
aagagtcggaaaagcagaaaatggtgaaacaaaaagtcgatgattgggag
gaaaaaaagaagaaagaagctaaagaaaacaaaaagagggagaaaaTTTC
TTTGCTACTCAACAGTGATAAATCGAGACCTATTTTACATTCACAGAATA
GAGGATCGAACAGCTCTTATATGAGTACGTCGGCTACGGACAGTCCAAGA
AGTAATGCAACGTTTGAAGTCACCGAGGAGAATTCGTTTGAAAAGTTTCG
TGAAGACTTTTTGCAGCATTCTGAAGCAACTCCACCATCGGAATTGACCT
ATGGGTCTGTCAAAGATTTCGTTCAATCCGTCATTCTCAGTGCTCTCTTA
GAGATCGAAAAAGAACAATCGCATCCAAAACCACTAACCATCAAGCGACC
AAAATCGCACGCACCTGCGCTCCGAAACCAACAACGTCACCTGCAACCCA
GACCACCTCCTCCCAAAAGTGCGCACGCGCGGAAATCACAAAATTTACCA
TTAAGAAGAATTAAAACTAAAGAACATACTCAATCCAACAAAAACGTCAC
TCCAAAAGGGTTAATGCGAGCGAAAACCTATGACGAGTGgatgtttgata
aaaaagttcaGCGCGGCGTGaaagaaaaggagaaagaaatcAACGAACAT
TACGATTTACTGCAACAAAAGTTAATCGAACTGGAGAAAGACCGTAGGAA
TGCTTTATATCATCTACGAGAGTCTTCCATGATAGAATATCATCATAAAC
AGTTACCATTACTTTCCAAACGACTGGAGCCACAAGGAAGTGAATCGTCG
TCTATAAAGTCGTACCTTTCCAATTTATGA Coding sequence (CDS) from alignment at sc0000078_pilon:871427..874606+ >XLOC_033380 ID=XLOC_033380|Name=XLOC_033380|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6360bp|location=Sequence derived from alignment at sc0000078_pilon:871427..874606+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGAAAAACTTACGGCAGACGACATACGATGACGATTTCGACATGTT
TGGAGAGGTTGTGAACGACGTGgctcaaagaaaacaaaacgaAGAAAACT
TCTTCAATGTTGAAACTAAACCAAACACTCCTCCAACAACAAATCTACTT
ATGGAAGTTAATTCAAGCGAAAGCCCAGCTGTATCAAGGCAAAGCGTATA
TCTTGACGGCACTTTGACGCCAAGTGCCGCCAGAGCTCGAACAGGGTCCT
CAAGATCCGCCTCGAACTTATCCATGGACGGCTTTGAAGGAATAGAGACA
GAACGAGAACACAATTTTTCGTATGATATCAGAGACTCGTTTGATGATAT
TGAAGTTCAAAGCAGACTAAGTCGTCGAACAGATTCGGATCCTGTAGTTG
AGCGGTTTTATAACGATTCGATTATTGAAGAAACAGTAGGAGAAAAATCC
ATGGAAAAGAGGCTATCAACACCAGATGCAGTTATAAGCCGGCGGAATAC
TCCAAGTAATGAGACAATCGAGCATACAGAAAATAACCACGACAGAGAAA
TTGCAACTccaacttctgaatacagtccAAGGAATAATTTCGACGAACCC
CATAACAAAGATACGCTCGCCATCAACAAAGGAGATTATATTTCAGTGGA
AATAAAGAAGAGTGAAACACCATCATTACAAGAGAAATCTGATAGCCCCA
GAAATGATTATGACAACATTGAGAATAATGAAAAAGACAATAAATTGAAT
CGGTCTTCATCAGTTGAAAGCCCGAGAGAAAATGTAGATAAAGCCGAGGA
CACTACGAGCGACAATAATGATGATAACGACCATGAAACCGAAAAAGAGT
CCGAGAGTCACGAGCAAACCTATGAAAGCCCGAGAGAAAATGTAGATAAA
GGCGAAGAAACTATGAGCGACAATAATGATAACGACGATGAAACCGAAAA
CAAGTCCGAGAGCCACGAGCAATCTTATGATAAAACAGACCAGAGTGATT
TCAAAAGCATACTCCATTACAAAGATTCTCTCGaagctgaaaatgaaaaa
tcaactgAGAAGAAGACCGAGAATTCCACCGATAAGGACTATGAACAAAA
CGATAATCAAACTGAGGAGCGAGAAATATTGGAGGATGAAAACGAGAGTT
TGACCGAAAACGAGGGTGCAGACGAAGACGAAAATATCGAATCAGAAACC
ACTCCTAGAGATGAGGACTCTCGGGAAAAGGAAGACGATAATACCGAACG
AGGAGAAATTTATCGAAACATCAAGGAAGTAAACAATGATTTTAACGAAg
tcaaaaaagggaaaattaaattatctagtggaaaagaaatcaacgaaaaa
tTCGAAGAGGGAGATTCAGGGAACGAGTCTAATGCTTCAAAAGAGAGTTC
CATTGCTATGACGACCgaagaaaacaaattaataaaaaatgaagatggtg
aaaatgagcagtcgaaaagtgaaaaCTTAGTGAATGGTATACCCCaggag
aaaaaagagaaaaataatgatGATTTGGATGAAGATAAGGAGGGTTCAGA
AGGGAAACCCGAAAAATTGACTCTGTTGGAAGATATGATgagagatttac
agagagaaattgatgaggaaaaagaagagcctcaaaagaaaaagaaaact
gtGATTTTCAAGAGGGACGGTGATACGTATGATGAAAAAGGAGATCGAAG
ATATGATATGAGTGCCCTGGAGATGGTCAGTGAGGATGAAAATGAATTCG
TTAATCTTCAGGAAGTACAACAAGCTCGGATCGAGTTAAATGATTATGCA
AAGGACCTTGATAATTTCAATCATATCATCAATGAGTTAGAGAAAACACC
TGAAGAGAAAAGAATGGAATCAAATCGAAGTTTGACATTCGATTTGGGTG
ACTTGGGAATCGATGATTTTGAAGATGAGGAAAGAGAAGGTAGTACTAAT
CGgaaaacaccgaaaaaagcgaaaaagataaagaaaaagaagaagaaaac
tgATGTTGTTTACAGCAAAGTCTGCCAAAAATGTCGAAATCCAATCTTCA
AGAAAGATTCGTATTTAGAactgaatgaaattttcagtgaCAGTGTTTTA
TGTAAAAAATGTTTGGCTGGTAAATCGAATAATAAAGGAAAAGAGAAGAA
GATTGAGAAGTCACCGAAACATGATATTGGGCGGATTAAAGCCGAAGTTA
AGCCAGCTTTAGATTCTCGACTGGAGAAAAGTGAAAATACTGCATTACAG
AAATGGTTGGAGAAAAAGAGTAAAGAGGAACGAGTGAGAAAAAGGCAAGA
GCGGAGAgaacggaaagctaaagctaaagaaataaaacagaagaaacgcg
aagagtcggaaaagcagaaaatggtgaaacaaaaagtcgatgattgggag
gaaaaaaagaagaaagaagctaaagaaaacaaaaagagggagaaaaTTTC
TTTGCTACTCAACAGTGATAAATCGAGACCTATTTTACATTCACAGAATA
GAGGATCGAACAGCTCTTATATGAGTACGTCGGCTACGGACAGTCCAAGA
AGTAATGCAACGTTTGAAGTCACCGAGGAGAATTCGTTTGAAAAGTTTCG
TGAAGACTTTTTGCAGCATTCTGAAGCAACTCCACCATCGGAATTGACCT
ATGGGTCTGTCAAAGATTTCGTTCAATCCGTCATTCTCAGTGCTCTCTTA
GAGATCGAAAAAGAACAATCGCATCCAAAACCACTAACCATCAAGCGACC
AAAATCGCACGCACCTGCGCTCCGAAACCAACAACGTCACCTGCAACCCA
GACCACCTCCTCCCAAAAGTGCGCACGCGCGGAAATCACAAAATTTACCA
TTAAGAAGAATTAAAACTAAAGAACATACTCAATCCAACAAAAACGTCAC
TCCAAAAGGGTTAATGCGAGCGAAAACCTATGACGAGTGgatgtttgata
aaaaagttcaGCGCGGCGTGaaagaaaaggagaaagaaatcAACGAACAT
TACGATTTACTGCAACAAAAGTTAATCGAACTGGAGAAAGACCGTAGGAA
TGCTTTATATCATCTACGAGAGTCTTCCATGATAGAATATCATCATAAAC
AGTTACCATTACTTTCCAAACGACTGGAGCCACAAGGAAGTGAATCGTCG
TCTATAAAGTCGTACCTTTCCAATTTATGAATGGAGAAAAACTTACGGCA
GACGACATACGATGACGATTTCGACATGTTTGGAGAGGTTGTGAACGACG
TGgctcaaagaaaacaaaacgaAGAAAACTTCTTCAATGTTGAAACTAAA
CCAAACACTCCTCCAACAACAAATCTACTTATGGAAGTTAATTCAAGCGA
AAGCCCAGCTGTATCAAGGCAAAGCGTATATCTTGACGGCACTTTGACGC
CAAGTGCCGCCAGAGCTCGAACAGGGTCCTCAAGATCCGCCTCGAACTTA
TCCATGGACGGCTTTGAAGGAATAGAGACAGAACGAGAACACAATTTTTC
GTATGATATCAGAGACTCGTTTGATGATATTGAAGTTCAAAGCAGACTAA
GTCGTCGAACAGATTCGGATCCTGTAGTTGAGCGGTTTTATAACGATTCG
ATTATTGAAGAAACAGTAGGAGAAAAATCCATGGAAAAGAGGCTATCAAC
ACCAGATGCAGTTATAAGCCGGCGGAATACTCCAAGTAATGAGACAATCG
AGCATACAGAAAATAACCACGACAGAGAAATTGCAACTccaacttctgaa
tacagtccAAGGAATAATTTCGACGAACCCCATAACAAAGATACGCTCGC
CATCAACAAAGGAGATTATATTTCAGTGGAAATAAAGAAGAGTGAAACAC
CATCATTACAAGAGAAATCTGATAGCCCCAGAAATGATTATGACAACATT
GAGAATAATGAAAAAGACAATAAATTGAATCGGTCTTCATCAGTTGAAAG
CCCGAGAGAAAATGTAGATAAAGCCGAGGACACTACGAGCGACAATAATG
ATGATAACGACCATGAAACCGAAAAAGAGTCCGAGAGTCACGAGCAAACC
TATGAAAGCCCGAGAGAAAATGTAGATAAAGGCGAAGAAACTATGAGCGA
CAATAATGATAACGACGATGAAACCGAAAACAAGTCCGAGAGCCACGAGC
AATCTTATGATAAAACAGACCAGAGTGATTTCAAAAGCATACTCCATTAC
AAAGATTCTCTCGaagctgaaaatgaaaaatcaactgAGAAGAAGACCGA
GAATTCCACCGATAAGGACTATGAACAAAACGATAATCAAACTGAGGAGC
GAGAAATATTGGAGGATGAAAACGAGAGTTTGACCGAAAACGAGGGTGCA
GACGAAGACGAAAATATCGAATCAGAAACCACTCCTAGAGATGAGGACTC
TCGGGAAAAGGAAGACGATAATACCGAACGAGGAGAAATTTATCGAAACA
TCAAGGAAGTAAACAATGATTTTAACGAAgtcaaaaaagggaaaattaaa
ttatctagtggaaaagaaatcaacgaaaaatTCGAAGAGGGAGATTCAGG
GAACGAGTCTAATGCTTCAAAAGAGAGTTCCATTGCTATGACGACCgaag
aaaacaaattaataaaaaatgaagatggtgaaaatgagcagtcgaaaagt
gaaaaCTTAGTGAATGGTATACCCCaggagaaaaaagagaaaaataatga
tGATTTGGATGAAGATAAGGAGGGTTCAGAAGGGAAACCCGAAAAATTGA
CTCTGTTGGAAGATATGATgagagatttacagagagaaattgatgaggaa
aaagaagagcctcaaaagaaaaagaaaactgtGATTTTCAAGAGGGACGG
TGATACGTATGATGAAAAAGGAGATCGAAGATATGATATGAGTGCCCTGG
AGATGGTCAGTGAGGATGAAAATGAATTCGTTAATCTTCAGGAAGTACAA
CAAGCTCGGATCGAGTTAAATGATTATGCAAAGGACCTTGATAATTTCAA
TCATATCATCAATGAGTTAGAGAAAACACCTGAAGAGAAAAGAATGGAAT
CAAATCGAAGTTTGACATTCGATTTGGGTGACTTGGGAATCGATGATTTT
GAAGATGAGGAAAGAGAAGGTAGTACTAATCGgaaaacaccgaaaaaagc
gaaaaagataaagaaaaagaagaagaaaactgATGTTGTTTACAGCAAAG
TCTGCCAAAAATGTCGAAATCCAATCTTCAAGAAAGATTCGTATTTAGAa
ctgaatgaaattttcagtgaCAGTGTTTTATGTAAAAAATGTTTGGCTGG
TAAATCGAATAATAAAGGAAAAGAGAAGAAGATTGAGAAGTCACCGAAAC
ATGATATTGGGCGGATTAAAGCCGAAGTTAAGCCAGCTTTAGATTCTCGA
CTGGAGAAAAGTGAAAATACTGCATTACAGAAATGGTTGGAGAAAAAGAG
TAAAGAGGAACGAGTGAGAAAAAGGCAAGAGCGGAGAgaacggaaagcta
aagctaaagaaataaaacagaagaaacgcgaagagtcggaaaagcagaaa
atggtgaaacaaaaagtcgatgattgggaggaaaaaaagaagaaagaagc
taaagaaaacaaaaagagggagaaaaTTTCTTTGCTACTCAACAGTGATA
AATCGAGACCTATTTTACATTCACAGAATAGAGGATCGAACAGCTCTTAT
ATGAGTACGTCGGCTACGGACAGTCCAAGAAGTAATGCAACGTTTGAAGT
CACCGAGGAGAATTCGTTTGAAAAGTTTCGTGAAGACTTTTTGCAGCATT
CTGAAGCAACTCCACCATCGGAATTGACCTATGGGTCTGTCAAAGATTTC
GTTCAATCCGTCATTCTCAGTGCTCTCTTAGAGATCGAAAAAGAACAATC
GCATCCAAAACCACTAACCATCAAGCGACCAAAATCGCACGCACCTGCGC
TCCGAAACCAACAACGTCACCTGCAACCCAGACCACCTCCTCCCAAAAGT
GCGCACGCGCGGAAATCACAAAATTTACCATTAAGAAGAATTAAAACTAA
AGAACATACTCAATCCAACAAAAACGTCACTCCAAAAGGGTTAATGCGAG
CGAAAACCTATGACGAGTGgatgtttgataaaaaagttcaGCGCGGCGTG
aaagaaaaggagaaagaaatcAACGAACATTACGATTTACTGCAACAAAA
GTTAATCGAACTGGAGAAAGACCGTAGGAATGCTTTATATCATCTACGAG
AGTCTTCCATGATAGAATATCATCATAAACAGTTACCATTACTTTCCAAA
CGACTGGAGCCACAAGGAAGTGAATCGTCGTCTATAAAGTCGTACCTTTC
CAATTTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:871427..874606 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 2170-3183:2167 |
| Aaloc | 1-2166:1 |
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