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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:779213..784001+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033379 ID=XLOC_033379|Name=XLOC_033379|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4789bp|location=Sequence derived from alignment at sc0000078_pilon:779213..784001+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGAATCAGATTTTACCGTAAGTTCATTTAAATTATGATTATATTT
TTATTCTGATCTTCTGAAGGTTGTGAGCGAGCCCTTTTTGACcttatttg
taatttttttcacaaaaaaatgaaCAGTCGATATAAGAAACGTGTTTTAA
CATACAAGGAAGTATATACTATATCAAACATTTCTCTAATGTTTACATTT
cgatttatgatattttttctgTTTGTATTAAGATATATATGTTAACAATG
TATTTTGACGGATTGATGGATGCCTTTGGAAAGTGTCACTTTTCTTAAGA
TGACttttttttGCTACATTTCTGGGAGGAGAGCTTTGAGTTTCAAATGG
GCAAATCTATCCTGTTATAactcttaaaagttttattgactttttctagg
aaccccatttttgcttttctgcacttttttatttGGAAACCCCAAATCCT
GATCTTGAAGTTTATTTTTGCATCAGCCCATTTTGTACCTGCTGAAGGCT
TTTAAATGAAAAGGTTGGGGATCCCACTGGGAtttttttCACTGATGTTT
TCAAAACTGTAGGAAGGACTGTAGGGaaataaatacaaaactttGTTCGA
AGGGGTCGAAGTATAAAGTTTTTCCAAGGGaagtataaaaacaaaacaat
tcaaacaTTATTGTTTTTGGTTTCATCACCAAATGAttgttcaaatattt
ttattttcatgccAAGGAACTTACGTATAATAACTGTTTCAGGAGttttt
ttAGGAGTTGTCCCCTTAaaaccttctttttttaaagaataagaaaattt
tcCTTATTCTGTAAGGATTGATGGTTCTGAATTGTGGtggtcaaattttt
tctggagtAAGGTTGAATTAAAACACAAACTTAATCTTGTCTgctctgag
aaaaaaaaacccaaAGATTTAATTCACCCAAGacccttttttttattttg
atctcttttttctttgtaattcaaACCAATTGAAAACAGACGAACGTACC
AGGAGATTCTGTTaaaaaaaGGGGTGGATTTCACCTTAGATACTTAATTC
CAATACATAGAGCTATTTAAAAATAGGGGTGTTGAAAAAGTAAGTACTGA
ACACTTTATTTCTTTGGGGaaaaaaaGAATCTAGGttattttcaagctaa
aacaaCACTAATTACTCTCTCATAATTTGACTTATTAggcaattttcaaa
acaatatgaTGCTATTAAGTAAATCTCTAAGGAtttttttATTCCCTTCT
TTTTAATTTACTGTAATATTATAAGCATTAGTCGTTATATGATGATGGGA
AAGGGGTCTTTTATTTTCCTACATGATTATTTTAAACCCTTGAGTATTTT
GGTTGCAACTAGCTGTGCTGTTTATTTTTCGATGTTAGTTCAGCAGTACC
ATGAGctttgcattcctttgtatttattttacagaccttttttagtgttc
tttttatttgctcgtttCGCCAAGAGTGATGTGCTGAATCTTGTGTGTTG
TCTTCTTTCgataaataaatttctttttttttttgtgaaggcgtgcattt
ttattttttcaacctTTCAGTAAAGGTAGTCAGGGCAAGAGattgaaaag
gaagaaaaaagatttttaacaaCGGTTGACTTTGATTGCcatttttttga
taataattCATAAAGTTAATTGCGCTTTCTGTAAAAGGTAATAACAGTTT
TATAATGATGAGCTATTaggcaaatttttcttttctctttttcttttcct
gatTTGATTGACGTTTTGACTGTCAGCACTTTAGGGAGTTAGGAATTGAA
AAGTCACTGCTGGATCTTTTAAAGTCTTTGTATTTATGGCcttttatata
tcgatttcttctttaaacatatgtttcttttacataatattcttcttttt
tctttaattataataGATGGTTGGAGCGTCTAGACGAAAAACAAGACTTC
CCCGCAAGATTTTGCGAGTGAAACAAGACGATGGACATGTTAAACTCGAG
CCTCAAGAAAATTGCTATAAATCAGGTATATAATAAGAGTTATTAAACTT
TCCCTATTTAAAATATTGGATAACTTCCCTctaaattttattaattttgt
ttaGGGTTTCCCTTTTTAACTTCCTTTACTTTTCATATGATTCTTCAAAC
GAACTTCCTTGTTTAACTTTTCCTCTACCTAATTGCATTCAAAGAAAAAG
GCGTTTTTTAAGTCCCTGTCGGTATTAAAAGACTTAAAGATCTTTTAATG
AAATTCTATATTTTTACCCCTTTTTTGTATCTGCCTGTAAAATCTTTGAA
AAGGTGTGAAAAAATACTATTATTATTAATAGTTTAGTGGTAATAAAGAA
ACTCTTTGactttttatcccccttttttaaTGTGTGCTTGAAGACTTTAT
TTATAGTACTAATTAGGGACTTCTAAAAGGGGcctcaaatctttttttgc
taGGATATCTTGCGAATTTTTCTTCCTTGATCTTATAAATTATGAATTCC
ATATTAAAACATCGTTTTATGAAGGATCTGTTAAAGAATCAAATCATCTT
TATATTCACAGTTGCTTCTGAGACTCTTTTCCTTGTTCCTTCTTCCCCTa
aattgtaaaacaggaaaaattaccccttaaaaaagaacagggaaaaaaTA
GCCCCTTTCTTATTCTTCATTTATTTACTCCCAAtttttttCCTGCTTCT
TCTAGATGACCAAATGATGGAATCTGATGATATCCCgtctccttcttctt
ctcctcaATCAAATGACCAATACAATGATAGTTTTTACGACAAATATGAT
ACAAATCGTTACAACACTGCCTATGTTGGTGGTGAGTACCTGAAAGAAGC
CACAaagcttttccttaaatctCAAACCACTTCAGATTACATTGTTGTAC
AGCCATCCTATGATGATCAACCTCCAGTCATCTCGTCAGAACCTGATGTC
AAAATCTCGTCACCACCAAGAGATGATCATGATGTCAGAGATACTAGAGA
ACATGGAGATCGAATCAAAACATACAATCCTGTCAAGAAACAATATTACC
AGAAACATCATATACCAAACTTAACCAAGAAGCATCATCACCCTGAACCA
ACACCAGATAATCCTTACCAATGTGAAACTTGTGATATGCTTTTCAAGAA
TCTAGAGCTTCTGTCTGACCATCAAAAGACAGTTCATGATAACAACAGGC
AATTTGCTTGCAGATACTGTGGCAAACGCTTCAATGATAAATATAATATG
CGGAAGCATGTTTTGATTCATGTTGGTGAAAAGCGTCACAAGTGTCAATT
CTGTGAAAAAGCATTTTTAAGAAAAGATCACTTGAGGAGTCACTTGCAGA
CCCATTACAACAGAAAATATGGCTGCAAGCTCTGTGGCAAGAGCTTCAAA
ACAATTGAGCTTTACCACAGGCACGTCAAAACACATAAAGAATTAGACCA
CCTGTCTGAAATTAACAATTTAGAAAATCTCCTGCCAGAATTGGAGAGAT
ATGATAGCCCAAAACTTGACAGATACAGTCCTAAACTTGACCGATACGAC
AGCCCTAAACTTGATCGATATGACAGCCCAATTCCAAGCAGTAGACCAAC
TCACCATCACTATACACCTGCACCAGAAATCACAAGGGAACTTATTGCAC
CACCTGTTGTCAAGCATGAACGCATGAATGAAAGGCTGGATGATTCAAGA
GGGGAGGACTCACCATGGAACCGTAGTGGTAGCCCAACCTACTCAGATAT
CAGTGGTAGCTCATTTTCACAATCAAGTCCTAGAGGGATGGACTATGGAA
GCGCAAACGAAAATACAGATGTACTGAAGAGAGTATTGTGTAAGTAGTGG
TTCTTCTTCTAGACTATGTTTTCAATCATGAGAAAAAGGGGAAATATCTT
TCAACATTGATGTGGACTAATTTAGGCATCTGAGGGTTTCTGTCCTTTTT
CCGATGAAGAGAGTCTCATATGCAGATGTTTTTATAAAGGTTTTATGGTC
AAAACACACAGAAATAACTGTATCTCTTTcaattttgttctttattttta
tcttaatttatccttgaaaaaataaggcttttccccttattttttccaag
gaaattttggtttttgttcTAGTTTATTGAAAGTTGAGATTAAGAAAAGC
AGAGAAAGAAGTACtttacaattgaaaaaatatccttaTTATTGTTTGga
cttatttttaattttttgtcaatttctttcatttttagcaTACAGATGTG
GATTTTGCAATGCTACTTTTGAAGACAAAGAATCTGTGACAATACATGAA
AGAAAATGTCGAGCTGAGACCCAAAAATGGCAATGTGTCAAATGCAACAT
TGTTTTTGATGAACCTGgtacgttgaaacaacattatgAGAAAGTCCATT
CCACTGAAAAACCTGTTCAAAGTCCATCCAGGTGGCGTTGTAAAACCTGT
GACATCAACTACCCCAATTCAAAAGAGCTCAGCCGCCATTATGCAAGTGC
CCATAAGGATGCACAAATCTTCCCATGTTCTGAATGCCCGAAAACCTTTA
CTGTATGGCATAACCTGAAGAAACATATGCTCATCCATTTGGGAGACAAG
AAACATAAGTGCACAGTTTGTGACAAAGGATTTGTCCGCAAAGATCATTT
GAATAGTCATATGAAGGTACATTTGGGTGATGGCTCAAAATACACATGCC
CAATCTGTATGAAAGTCTTCCGTTTGAAACAAATGTATATTAAACACATG
AATCTACATGGGCTTGAACAGGCTCAACAACCTGTATGA Coding sequence (CDS) from alignment at sc0000078_pilon:779213..784001+ >XLOC_033379 ID=XLOC_033379|Name=XLOC_033379|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3630bp|location=Sequence derived from alignment at sc0000078_pilon:779213..784001+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGTTGAATCAGATTTTACCATGGTTGAATCAGATTTTACCATGGTTGG
AGCGTCTAGACGAAAAACAAGACTTCCCCGCAAGATTTTGCGAGTGAAAC
AAGACGATGGACATGTTAAACTCGAGCCTCAAGAAAATTGCTATAAATCA
GATGGTTGGAGCGTCTAGACGAAAAACAAGACTTCCCCGCAAGATTTTGC
GAGTGAAACAAGACGATGGACATGTTAAACTCGAGCCTCAAGAAAATTGC
TATAAATCAGATGACCAAATGATGGAATCTGATGATATCCCgtctccttc
ttcttctcctcaATCAAATGACCAATACAATGATAGTTTTTACGACAAAT
ATGATACAAATCGTTACAACACTGCCTATGTTGGTGGTGAGTACCTGAAA
GAAGCCACAaagcttttccttaaatctCAAACCACTTCAGATTACATTGT
TGTACAGCCATCCTATGATGATCAACCTCCAGTCATCTCGTCAGAACCTG
ATGTCAAAATCTCGTCACCACCAAGAGATGATCATGATGTCAGAGATACT
AGAGAACATGGAGATCGAATCAAAACATACAATCCTGTCAAGAAACAATA
TTACCAGAAACATCATATACCAAACTTAACCAAGAAGCATCATCACCCTG
AACCAACACCAGATAATCCTTACCAATGTGAAACTTGTGATATGCTTTTC
AAGAATCTAGAGCTTCTGTCTGACCATCAAAAGACAGTTCATGATAACAA
CAGGCAATTTGCTTGCAGATACTGTGGCAAACGCTTCAATGATAAATATA
ATATGCGGAAGCATGTTTTGATTCATGTTGGTGAAAAGCGTCACAAGTGT
CAATTCTGTGAAAAAGCATTTTTAAGAAAAGATCACTTGAGGAGTCACTT
GCAGACCCATTACAACAGAAAATATGGCTGCAAGCTCTGTGGCAAGAGCT
TCAAAACAATTGAGCTTTACCACAGGCACGTCAAAACACATAAAGAATTA
GACCACCTGTCTGAAATTAACAATTTAGAAAATCTCCTGCCAGAATTGGA
GAGATATGATAGCCCAAAACTTGACAGATACAGTCCTAAACTTGACCGAT
ACGACAGCCCTAAACTTGATCGATATGACAGCCCAATTCCAAGCAGTAGA
CCAACTCACCATCACTATACACCTGCACCAGAAATCACAAGGGAACTTAT
TGCACCACCTGTTGTCAAGCATGAACGCATGAATGAAAGGCTGGATGATT
CAAGAGGGGAGGACTCACCATGGAACCGTAGTGGTAGCCCAACCTACTCA
GATATCAGTGGTAGCTCATTTTCACAATCAAGTCCTAGAGGGATGGACTA
TGGAAGCGCAAACGAAAATACAGATGTACTGAAGAGAGTATTGTATGACC
AAATGATGGAATCTGATGATATCCCgtctccttcttcttctcctcaATCA
AATGACCAATACAATGATAGTTTTTACGACAAATATGATACAAATCGTTA
CAACACTGCCTATGTTGGTGGTGAGTACCTGAAAGAAGCCACAaagcttt
tccttaaatctCAAACCACTTCAGATTACATTGTTGTACAGCCATCCTAT
GATGATCAACCTCCAGTCATCTCGTCAGAACCTGATGTCAAAATCTCGTC
ACCACCAAGAGATGATCATGATGTCAGAGATACTAGAGAACATGGAGATC
GAATCAAAACATACAATCCTGTCAAGAAACAATATTACCAGAAACATCAT
ATACCAAACTTAACCAAGAAGCATCATCACCCTGAACCAACACCAGATAA
TCCTTACCAATGTGAAACTTGTGATATGCTTTTCAAGAATCTAGAGCTTC
TGTCTGACCATCAAAAGACAGTTCATGATAACAACAGGCAATTTGCTTGC
AGATACTGTGGCAAACGCTTCAATGATAAATATAATATGCGGAAGCATGT
TTTGATTCATGTTGGTGAAAAGCGTCACAAGTGTCAATTCTGTGAAAAAG
CATTTTTAAGAAAAGATCACTTGAGGAGTCACTTGCAGACCCATTACAAC
AGAAAATATGGCTGCAAGCTCTGTGGCAAGAGCTTCAAAACAATTGAGCT
TTACCACAGGCACGTCAAAACACATAAAGAATTAGACCACCTGTCTGAAA
TTAACAATTTAGAAAATCTCCTGCCAGAATTGGAGAGATATGATAGCCCA
AAACTTGACAGATACAGTCCTAAACTTGACCGATACGACAGCCCTAAACT
TGATCGATATGACAGCCCAATTCCAAGCAGTAGACCAACTCACCATCACT
ATACACCTGCACCAGAAATCACAAGGGAACTTATTGCACCACCTGTTGTC
AAGCATGAACGCATGAATGAAAGGCTGGATGATTCAAGAGGGGAGGACTC
ACCATGGAACCGTAGTGGTAGCCCAACCTACTCAGATATCAGTGGTAGCT
CATTTTCACAATCAAGTCCTAGAGGGATGGACTATGGAAGCGCAAACGAA
AATACAGATGTACTGAAGAGAGTATTGTcaTACAGATGTGGATTTTGCAA
TGCTACTTTTGAAGACAAAGAATCTGTGACAATACATGAAAGAAAATGTC
GAGCTGAGACCCAAAAATGGCAATGTGTCAAATGCAACATTGTTTTTGAT
GAACCTGgtacgttgaaacaacattatgAGAAAGTCCATTCCACTGAAAA
ACCTGTTCAAAGTCCATCCAGGTGGCGTTGTAAAACCTGTGACATCAACT
ACCCCAATTCAAAAGAGCTCAGCCGCCATTATGCAAGTGCCCATAAGGAT
GCACAAATCTTCCCATGTTCTGAATGCCCGAAAACCTTTACTGTATGGCA
TAACCTGAAGAAACATATGCTCATCCATTTGGGAGACAAGAAACATAAGT
GCACAGTTTGTGACAAAGGATTTGTCCGCAAAGATCATTTGAATAGTCAT
ATGAAGGTACATTTGGGTGATGGCTCAAAATACACATGCCCAATCTGTAT
GAAAGTCTTCCGTTTGAAACAAATGTATATTAAACACATGAATCTACATG
GGCTTGAACAGGCTCAACAACCTGTATGAcaTACAGATGTGGATTTTGCA
ATGCTACTTTTGAAGACAAAGAATCTGTGACAATACATGAAAGAAAATGT
CGAGCTGAGACCCAAAAATGGCAATGTGTCAAATGCAACATTGTTTTTGA
TGAACCTGgtacgttgaaacaacattatgAGAAAGTCCATTCCACTGAAA
AACCTGTTCAAAGTCCATCCAGGTGGCGTTGTAAAACCTGTGACATCAAC
TACCCCAATTCAAAAGAGCTCAGCCGCCATTATGCAAGTGCCCATAAGGA
TGCACAAATCTTCCCATGTTCTGAATGCCCGAAAACCTTTACTGTATGGC
ATAACCTGAAGAAACATATGCTCATCCATTTGGGAGACAAGAAACATAAG
TGCACAGTTTGTGACAAAGGATTTGTCCGCAAAGATCATTTGAATAGTCA
TATGAAGGTACATTTGGGTGATGGCTCAAAATACACATGCCCAATCTGTA
TGAAAGTCTTCCGTTTGAAACAAATGTATATTAAACACATGAATCTACAT
GGGCTTGAACAGGCTCAACAACCTGTATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:779213..784001 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 1267-1815:4241 |
| Aaloc | 133-1263:2708 |
| Aaloc | 22-129:1917 |
| Aaloc | 1-21:1 |
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