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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:640656..642399+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033373 ID=XLOC_033373|Name=XLOC_033373|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1744bp|location=Sequence derived from alignment at sc0000078_pilon:640656..642399+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTTCCAGATTTTCCACTGACGAATGAAGACAACACAGCAACTGC
AGATCAGTACACACTCAGCCACCATAAAGATTTGAATAACAACTCAACGG
AACACGTATCGGCCACCACACAAGAACATATCAGAAACATTTCAAATCTT
AACATTTCGAATAAAAGtatcttggaaaaattcgaagcGATGAACAAATg
tattgattattttcaacaacAGCTGCAAGAACATAAAGGCTCTATCAACG
AACTTGAATTTAGCTTAACCTCGCATAAACGAACTCAAGGTAAGCCCATG
ATAAAATTCTATAATCACATCTTACTGATTCTTACGGCTAGAAGAGGATA
GAAGAGCAGACCTTAATTCAAACAGGGTGGAAAATATCTCTCCTTTACAG
TTAAAAAATATCTCCAAACTTTATTGACTTCACAGCTTTCAGGAGTAATT
TTTCCATAGGGCTATTACCACGGGGTGTAGCTTTAAAATTGaaactattt
gaaattttatgtaTGACCTGTAGATTTTTTGGTAAAGAGTTCTTCCGCAA
TATCAAGGATAATCcaaattaatttttctcaaattgtttCATTCAGGACC
CAAAGAGGATACTGATGACGACTTACATTACGAGTCTGGTTGCGGTTTAT
TCCCTTTTATCCAAAAATGTCTGTTAAACGAGACCAAATACTACGATACA
ATTCGCTGGGTAAACAAGGCCGAACAAGAATTCAAAATCGTGGACCCTGA
TAATTTAGCGACACTTTGGGGCCAAGAAAAACGTAAAGAGGGAATGACAA
AGCGTAAACTGACCAGAAGTTTGGCGTATCTCGTAAACGCGAAAAAGAAG
TTACGCCGCTCATCTTCACGCACATTCATCTATCAAATTATCAATAAATT
TGGCAGAAGTATGTGTCCCTCACCTGAATCTAATTGGGAAGAATCGCCAA
CCACCCTTGAGAAATCTCAACCAACGCCCACCATggaacaaatgaaacaa
atattACGACAAAATCCTAAATATTTACAAGTCTTGATAGAcgttcaaaa
acaacaaaaagaatcAATTGGGAGTAAGAATATCCTAAAAGCTGGTTCCA
AACGATCTTCAAATACACAAGACCAACAGGTTCCAGAGAAATCAGTCAAA
TTGAACCAGGAATCTATCTTCAAGACTCCCCAGCAGCAATCACAAAACAA
CTTCATTGATACAGCTTCATCTTTTAACTGGTCCCAATCATATAATAACA
ATAACTATTCACCATCACCGGCTAATGACAGTTATGTCAGTTTTAGCCCT
CTCTCAACCTCATCAGATGGCAGCTCAAACTTTAGTCAAGTTTGCGATGG
TAACAATAATTTCATGTCAACAACTACTTCAAACTTTGTCTCTTTGTCTG
ACTCatcaaattcaatcttttctGGCGATTCACTTTTCAATTCTGGTAAC
TCTTCATCTACTCTTTTCAACAATAATTCCACGTCAAATTTCATGCAGCA
AATGTCCACGACAGTATCTACGGTGAATTTCACACCAGAAAATTCAACCT
CAAGTATTTTTACTACTCCTGTTAGTGACACCAACAGCTATAGTCAACAA
GTCACATCAGTACCTACAAACTTTACAAATCCAATCGCTCATTCGTTGGT
CAGCGATGTTTCCGATATTGGATCTATTATTCCGACATTCTGTTTGAATC
GGAATTCAGGATTGAATAATGACATTTTTGCTTATCTTCAATAA Coding sequence (CDS) from alignment at sc0000078_pilon:640656..642399+ >XLOC_033373 ID=XLOC_033373|Name=XLOC_033373|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2874bp|location=Sequence derived from alignment at sc0000078_pilon:640656..642399+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCATTTCCAGATTTTCCACTGACGAATGAAGACAACACAGCAACTGC
AGATCAGTACACACTCAGCCACCATAAAGATTTGAATAACAACTCAACGG
AACACGTATCGGCCACCACACAAGAACATATCAGAAACATTTCAAATCTT
AACATTTCGAATAAAAGtatcttggaaaaattcgaagcGATGAACAAATg
tattgattattttcaacaacAGCTGCAAGAACATAAAGGCTCTATCAACG
AACTTGAATTTAGCTTAACCTCGCATAAACGAACTCAAGATGGCATTTCC
AGATTTTCCACTGACGAATGAAGACAACACAGCAACTGCAGATCAGTACA
CACTCAGCCACCATAAAGATTTGAATAACAACTCAACGGAACACGTATCG
GCCACCACACAAGAACATATCAGAAACATTTCAAATCTTAACATTTCGAA
TAAAAGtatcttggaaaaattcgaagcGATGAACAAATgtattgattatt
ttcaacaacAGCTGCAAGAACATAAAGGCTCTATCAACGAACTTGAATTT
AGCTTAACCTCGCATAAACGAACTCAAGGACCCAAAGAGGATACTGATGA
CGACTTACATTACGAGTCTGGTTGCGGTTTATTCCCTTTTATCCAAAAAT
GTCTGTTAAACGAGACCAAATACTACGATACAATTCGCTGGGTAAACAAG
GCCGAACAAGAATTCAAAATCGTGGACCCTGATAATTTAGCGACACTTTG
GGGCCAAGAAAAACGTAAAGAGGGAATGACAAAGCGTAAACTGACCAGAA
GTTTGGCGTATCTCGTAAACGCGAAAAAGAAGTTACGCCGCTCATCTTCA
CGCACATTCATCTATCAAATTATCAATAAATTTGGCAGAAGTATGTGTCC
CTCACCTGAATCTAATTGGGAAGAATCGCCAACCACCCTTGAGAAATCTC
AACCAACGCCCACCATggaacaaatgaaacaaatattACGACAAAATCCT
AAATATTTACAAGTCTTGATAGAcgttcaaaaacaacaaaaagaatcAAT
TGGGAGTAAGAATATCCTAAAAGCTGGTTCCAAACGATCTTCAAATACAC
AAGACCAACAGGTTCCAGAGAAATCAGTCAAATTGAACCAGGAATCTATC
TTCAAGACTCCCCAGCAGCAATCACAAAACAACTTCATTGATACAGCTTC
ATCTTTTAACTGGTCCCAATCATATAATAACAATAACTATTCACCATCAC
CGGCTAATGACAGTTATGTCAGTTTTAGCCCTCTCTCAACCTCATCAGAT
GGCAGCTCAAACTTTAGTCAAGTTTGCGATGGTAACAATAATTTCATGTC
AACAACTACTTCAAACTTTGTCTCTTTGTCTGACTCatcaaattcaatct
tttctGGCGATTCACTTTTCAATTCTGGTAACTCTTCATCTACTCTTTTC
AACAATAATTCCACGTCAAATTTCATGCAGCAAATGTCCACGACAGTATC
TACGGTGAATTTCACACCAGAAAATTCAACCTCAAGTATTTTTACTACTC
CTGTTAGTGACACCAACAGCTATAGTCAACAAGTCACATCAGTACCTACA
AACTTTACAAATCCAATCGCTCATTCGTTGGTCAGCGATGTTTCCGATAT
TGGATCTATTATTCCGACATTCTGTTTGAATCGGAATTCAGGATTGAATA
ATGACATTTTTGCTTATCTTCAATAAGACCCAAAGAGGATACTGATGACG
ACTTACATTACGAGTCTGGTTGCGGTTTATTCCCTTTTATCCAAAAATGT
CTGTTAAACGAGACCAAATACTACGATACAATTCGCTGGGTAAACAAGGC
CGAACAAGAATTCAAAATCGTGGACCCTGATAATTTAGCGACACTTTGGG
GCCAAGAAAAACGTAAAGAGGGAATGACAAAGCGTAAACTGACCAGAAGT
TTGGCGTATCTCGTAAACGCGAAAAAGAAGTTACGCCGCTCATCTTCACG
CACATTCATCTATCAAATTATCAATAAATTTGGCAGAAGTATGTGTCCCT
CACCTGAATCTAATTGGGAAGAATCGCCAACCACCCTTGAGAAATCTCAA
CCAACGCCCACCATggaacaaatgaaacaaatattACGACAAAATCCTAA
ATATTTACAAGTCTTGATAGAcgttcaaaaacaacaaaaagaatcAATTG
GGAGTAAGAATATCCTAAAAGCTGGTTCCAAACGATCTTCAAATACACAA
GACCAACAGGTTCCAGAGAAATCAGTCAAATTGAACCAGGAATCTATCTT
CAAGACTCCCCAGCAGCAATCACAAAACAACTTCATTGATACAGCTTCAT
CTTTTAACTGGTCCCAATCATATAATAACAATAACTATTCACCATCACCG
GCTAATGACAGTTATGTCAGTTTTAGCCCTCTCTCAACCTCATCAGATGG
CAGCTCAAACTTTAGTCAAGTTTGCGATGGTAACAATAATTTCATGTCAA
CAACTACTTCAAACTTTGTCTCTTTGTCTGACTCatcaaattcaatcttt
tctGGCGATTCACTTTTCAATTCTGGTAACTCTTCATCTACTCTTTTCAA
CAATAATTCCACGTCAAATTTCATGCAGCAAATGTCCACGACAGTATCTA
CGGTGAATTTCACACCAGAAAATTCAACCTCAAGTATTTTTACTACTCCT
GTTAGTGACACCAACAGCTATAGTCAACAAGTCACATCAGTACCTACAAA
CTTTACAAATCCAATCGCTCATTCGTTGGTCAGCGATGTTTCCGATATTG
GATCTATTATTCCGACATTCTGTTTGAATCGGAATTCAGGATTGAATAAT
GACATTTTTGCTTATCTTCAATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:640656..642399 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 292-1437:599 |
| Aaloc | 1-288:1 |
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