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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000078_pilon:493529..497495+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_033370 ID=XLOC_033370|Name=XLOC_033370|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3967bp|location=Sequence derived from alignment at sc0000078_pilon:493529..497495+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCGTTCGGCAAGAAACCAAGAAAATATTCTATAGAAGGCAAAGATGA
AGACCTGATACGGAACGATTTATACGAAGCATGTCGCACGGGCAAAACAG
AATGGTTGAATGTGATATTAGGTCAACCAGAAGATATGTTTGATCTCAAT
GAAATAACTGAAGATGAGAAAGGCCAACAAGGGTAAGAAGATTctatctt
tttataagaacaagaaaatttttcttgagGATCGGCTCTTCTACtttttt
tttGCGCTATAACCCTCAAATTgctcttatcctgttcttattctTTTGAC
AATATTAATGAACTAAAGGCTTTTTACCTATTTCTACTGCTTTGACCCTC
AACTTTCATTCATTGCAGTTTGTCTGCGTCACATTTGGCTGCGCGTCACA
ACCAAGCGGAATGTTTGGAGATCTTACTTGAACACGGTGCGTATGTAGAC
ATAGAAGATCGCTTTGGATTTCGACCCATTCACGATACAGCGTTGTATGG
ATATGATGACTGCTTGAAATTGCTTTTATCTCATGGCGCATCGACAGGTG
GAGCGAATGGAAGCGAGGTAAACACTTTTTCTTTCTAAGGGTTTTAAAAA
TACAGTACGGTCCTACGTCACTACAGTAACCAACCTGGGTTGAGCACCCG
TTTGCGAATCGAGATAAAAGACAACAACATTCAATTCTCAAAAGCCCTCC
TAGATTTGAGTTTTCGATGCCGTCGTTGTCAAAAAGAATTTGTCTTGTAT
TTTTTGTTACCAGTCCGCACCGCTAAGTACTGACAGGCGtataccacaga
tatcttatataaaacactagacaGAGCTACTCCGTCCCTAGCTGAAGCAG
AATAATCCACCATCTTTAataagtagaccatagttcggtgTTGGCaattt
tatcgatctttcgcctCACCGTTTCGTGCCATTTAGgttttttgattggt
tgaacaaATTTTGGTACCAAACTGTGACCTACTCTGGCCTACTTTACTTC
CAACAAAGAcagcgcattattttgcttcacctgccgttgcttgggaaata
cagagtagctctatttAGTGTTTTATGTAAGATATCTATGGTGTATAAAA
TAACAACATGCAATCCTCAAGTAAATTAAATGAcgacaaaaacaattttt
tcactaaCACTACTGTCtagttttttacattttaaacttatatttgcaat
attcatgacgtaatgttttatactgAAGCACCGAAAAAGAACGAGTGTTT
GCCACTTCCGTATGAAACATTACATCATGTATTTTATGAATTTACCTATA
GGTCCAACATGTAACACCATTACACTATGCTATGCAACAAAACCACAAAG
AGtgcatcaaaattttgaaaggatcGTCATCCATGGTACAGAATAATGAT
GAGATGGCTTGGGATATGGCTTCTAAACGAGGAAATGTTTCAATGATCTC
ACTAGCTGCTCAAGAAGGTTGGTAACAAAATAACTAGAACACCCTTTACA
GGGATGAGGTTTCCGCATCTCGTCTGGGAAGGATATAGTTTAAATGTCAG
ACTTTCTGCTTTGTCTTCGTTTGATGTAATGGAAGTAACAGAAAAAAGTC
GACgggaaaaatcttgaaaaaggcTAAGTAGTAAAGTCATTGTATTAACG
TTAAACTAAAGAAACCCTCGCATCCATTCGCTTTAGACAGGATCAATCTT
CGTCAAAAATAAGGAAGGCAAggcaaaaaaccttttaaatcAGACCTTAG
TCCTAGAATTACAAAACAATGTccatgatgataaaacaattaCATGTGAG
ATCGCTGGATATAAAACTTTCTTGTTTGCGCACCCAGTAATTTCTCAATC
CAAGTTTGCTTTGGCTATTATTGAGTTTGGGCCCCCAAGTGGTTTTCatg
atgacgtgatagggacttttttgcagcgcggttacgtgatttggaaattt
gttCCTCGTGATTGCGTGACGAGGTTAAAACGATCGTGATTTAAAAGATA
tttgagccgtgatacgtgatttagattttttcaaagggatgctgattttt
tgctgatttgcgtgatcgtgattgaagacaaaaaattgcgcgatatcgtg
atcagagttaccgctgggggggACTCATTATTAGATGCATGCTAAACAAa
cactgtcgaacgtgctaaccgcactgggctcaacttcagtgtttttaaat
aattcgtaggcccaattgtaaaattgtaaccaatttcaactaaaaactca
tgaccacccccttaaaatggaaattataaaataatgaaaaccaTCCACAG
GGATTAGCccttgaagtctccagcctgcctaaaagttttagcctcgtttt
ggcgaaaacttgtgaccacgcccttgaaaatggaaattttgaaataatga
aaaaaccGCCACCAGGGATTCGCCCAAgtatcaagtgtgcaaaatttcgg
ccaaatctgatcatttttgaagtctccagcctgccccaaagttttagcct
cgttttggcaaaaactcgtgaccacgtccttaaaaatgaaaattttcaaa
aatgagaaaaaacacctccagatattcacccaaggaacaagtgtgccaaa
tttcaaccaaacccgatcatttttgaagtcttcagcctgccccaaagttt
tagcctcgttttggcgaaaactcgtgaccgcgcccttgaaaatggaaatt
ttgaaaaaatgagaaaaaacacccccagatattcacccaaaaaaCAAGTA
TGCCAGATTTCAACTAAacccgatcatttttgaagtctccagcctgcccc
aaagttttagcctcgttttggcgaaaactcgtgaccacgcccttaaaaat
gaaaatttttaaaaaatgaaaaaaacacccccagatattcatccaaggaa
caagtgtaccaaatttcaaccaaatccgatcatttttgaagtctccagcc
tgccccaaagttttagcctcgttttggcgaaaactcgtgaccacgccctt
aaaaatggaaattttcagaaaatggaaaaaacatccccagatattcaccc
aaggaacaagtgtgccaaatttcagccaaacctgatcatttttgaagtct
ccagcctgccccaaagttttcggacagacatacatacacacacacacaca
cacacacacacacatacattgtcagattctagctcaactgaagttgagaa
taaaaaaCGATTCGTTTTCCTTTCCTTTTTCTAGCTCTCATCAACAAGAG
TATATCGAATTGGTTGAAAAACTCTGCACTGACCGGTCATACCAATTATT
TAGACAAAATTAAAACAGCTATCAACAGAAAGTTTGGTTCCCGCGAAGCA
CTCAATACTATTATTACAGCTTCACAACACGGGCAAACCGATTATATACG
GAAACTTATCGAACAAGGTGTAGATGTCAACTCGACAAATAAAGAAGGCA
ACACACCGCTACATTTCGCTTCAAGGTAAGATTCATTCATAtctattcat
gacgtaatgtttctgaattttgaatttcttttctccAGTCTAAATTTGTC
ACTACTGGCAAAAGCCGGagtgtttccgtagaaaacattacataaCGAAT
TCAAAGAAGTCACAGTTTAGCACACGTTGTtatttcaacattcatctaac
gtgcACAGGACGTCATGGCGTTTTTTACTTATTTAAAATCTGGACTAGTG
TTTAAAGACACTCTACAACTCGAATCCTTCCATAAATTGTGTACTTCCTG
CTCAAAACGCCAACTTGGTAACTATTACTCGAAGTCAACGCTCGAAAAAG
CGTCCCCTGTTTTGTCCCCACTCTAGCTTTAAAGAGGGGGGATCGTGTCA
AATTAGATCTGATCTGACTTGAAATTATATTCTGCTTTTCACCTTTTCAG
ATACGGACACGAAGACACAATAAAGCTTCTCGTTGATTCAGGAGCTGACT
TGGACAAATTGAATCAA Coding sequence (CDS) from alignment at sc0000078_pilon:493529..497495+ >XLOC_033370 ID=XLOC_033370|Name=XLOC_033370|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1710bp|location=Sequence derived from alignment at sc0000078_pilon:493529..497495+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCGTTCGGCAAGAAACCAAGAAAATATTCTATAGAAGGCAAAGATGA
AGACCTGATACGGAACGATTTATACGAAGCATGTCGCACGGGCAAAACAG
AATGGTTGAATGTGATATTAGGTCAACCAGAAGATATGTTTGATCTCAAT
GAAATAACTGAAGATGAGAAAGGCCAACAAGGATGCCGTTCGGCAAGAAA
CCAAGAAAATATTCTATAGAAGGCAAAGATGAAGACCTGATACGGAACGA
TTTATACGAAGCATGTCGCACGGGCAAAACAGAATGGTTGAATGTGATAT
TAGGTCAACCAGAAGATATGTTTGATCTCAATGAAATAACTGAAGATGAG
AAAGGCCAACAAGGTTTGTCTGCGTCACATTTGGCTGCGCGTCACAACCA
AGCGGAATGTTTGGAGATCTTACTTGAACACGGTGCGTATGTAGACATAG
AAGATCGCTTTGGATTTCGACCCATTCACGATACAGCGTTGTATGGATAT
GATGACTGCTTGAAATTGCTTTTATCTCATGGCGCATCGACAGGTGGAGC
GAATGGAAGCGAGTTTGTCTGCGTCACATTTGGCTGCGCGTCACAACCAA
GCGGAATGTTTGGAGATCTTACTTGAACACGGTGCGTATGTAGACATAGA
AGATCGCTTTGGATTTCGACCCATTCACGATACAGCGTTGTATGGATATG
ATGACTGCTTGAAATTGCTTTTATCTCATGGCGCATCGACAGGTGGAGCG
AATGGAAGCGAGGTCCAACATGTAACACCATTACACTATGCTATGCAACA
AAACCACAAAGAGtgcatcaaaattttgaaaggatcGTCATCCATGGTAC
AGAATAATGATGAGATGGCTTGGGATATGGCTTCTAAACGAGGAAATGTT
TCAATGATCTCACTAGCTGCTCAAGAAGGTCCAACATGTAACACCATTAC
ACTATGCTATGCAACAAAACCACAAAGAGtgcatcaaaattttgaaagga
tcGTCATCCATGGTACAGAATAATGATGAGATGGCTTGGGATATGGCTTC
TAAACGAGGAAATGTTTCAATGATCTCACTAGCTGCTCAAGAAGCTCTCA
TCAACAAGAGTATATCGAATTGGTTGAAAAACTCTGCACTGACCGGTCAT
ACCAATTATTTAGACAAAATTAAAACAGCTATCAACAGAAAGTTTGGTTC
CCGCGAAGCACTCAATACTATTATTACAGCTTCACAACACGGGCAAACCG
ATTATATACGGAAACTTATCGAACAAGGTGTAGATGTCAACTCGACAAAT
AAAGAAGGCAACACACCGCTACATTTCGCTTCAAGCTCTCATCAACAAGA
GTATATCGAATTGGTTGAAAAACTCTGCACTGACCGGTCATACCAATTAT
TTAGACAAAATTAAAACAGCTATCAACAGAAAGTTTGGTTCCCGCGAAGC
ACTCAATACTATTATTACAGCTTCACAACACGGGCAAACCGATTATATAC
GGAAACTTATCGAACAAGGTGTAGATGTCAACTCGACAAATAAAGAAGGC
AACACACCGCTACATTTCGCTTCAAGATACGGACACGAAGACACAATAAA
GCTTCTCGTTGATTCAGGAGCTGACTTGGACAAATTGAATCAAATACGGA
CACGAAGACACAATAAAGCTTCTCGTTGATTCAGGAGCTGACTTGGACAA
ATTGAATCAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000078_pilon | genome | sc0000078_pilon:493529..497495 + |
Properties
| Property Name | Value |
|---|
| Aaloc | 790-855:3902 |
| Aaloc | 550-786:3237 |
| Aaloc | 382-546:1302 |
| Aaloc | 184-381:370 |
| Aaloc | 1-180:1 |
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